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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0570
ILE 4210.0181
PHE 4220.0330
ILE 4230.0188
SER 4240.0134
ASN 4250.0138
ASP 4260.0132
LYS 4270.0131
GLU 4280.0121
SER 4290.0147
ILE 4300.0148
LYS 4310.0074
CYS 4320.0051
PRO 4330.0074
CYS 4340.0060
GLU 4350.0063
PRO 4360.0103
GLU 4370.0139
ARG 4380.0171
ILE 4390.0279
SER 4400.0195
GLU 4410.0296
SER 4420.0252
THR 4430.0373
CYS 4440.0206
ASN 4450.0105
PHE 4460.0137
TYR 4470.0192
VAL 4480.0162
CYS 4490.0081
ASN 4500.0032
CYS 4510.0035
VAL 4520.0067
GLU 4530.0094
LYS 4540.0124
GLU 10.0570
VAL 20.0303
GLN 30.0294
LEU 40.0133
VAL 50.0151
GLU 60.0140
SER 70.0116
GLY 80.0087
GLY 90.0051
GLY 100.0081
LEU 110.0109
VAL 120.0118
LYS 130.0189
PRO 140.0210
GLY 150.0211
GLY 160.0160
SER 170.0131
LEU 180.0095
LYS 190.0105
LEU 200.0104
SER 210.0129
CYS 220.0153
ALA 230.0181
ALA 240.0166
SER 250.0209
GLY 260.0291
PHE 270.0250
ILE 280.0201
PHE 290.0130
SER 300.0108
ASP 310.0119
TYR 320.0090
TYR 330.0062
MET 340.0051
TYR 350.0044
TRP 360.0045
VAL 370.0036
ARG 380.0026
GLN 390.0031
THR 400.0057
PRO 410.0111
GLU 420.0157
LYS 430.0110
ARG 440.0108
LEU 450.0079
GLU 460.0046
TRP 470.0058
VAL 480.0055
ALA 490.0060
THR 500.0052
ILE 510.0047
SER 520.0081
ASP 520.0099
GLY 530.0147
ASN 540.0162
SER 550.0110
TYR 560.0075
THR 570.0081
TYR 580.0065
TYR 590.0067
VAL 600.0079
ASP 610.0118
SER 620.0125
VAL 630.0109
LYS 640.0141
GLY 650.0164
ARG 660.0154
PHE 670.0086
THR 680.0086
ILE 690.0083
SER 700.0062
ARG 710.0073
ASP 720.0124
ASN 730.0065
ALA 740.0149
LYS 750.0238
ASN 760.0144
ASN 770.0150
LEU 780.0112
TYR 790.0124
LEU 800.0093
GLN 810.0099
MET 820.0112
SER 820.0147
SER 820.0183
LEU 820.0154
LYS 830.0179
SER 840.0184
GLU 850.0138
ASP 860.0100
THR 870.0101
ALA 880.0033
ILE 890.0029
TYR 900.0021
TYR 910.0022
CYS 920.0033
ALA 930.0051
ARG 940.0037
ASP 950.0044
GLY 960.0039
PRO 970.0060
THR 980.0032
ASP 990.0053
SER 1000.0038
SER 1000.0041
GLY 1000.0041
TYR 1000.0029
GLY 1000.0032
GLY 1000.0029
PHE 1000.0036
GLY 1010.0036
TYR 1020.0043
TRP 1030.0035
GLY 1040.0042
GLN 1050.0045
GLY 1060.0071
THR 1070.0048
LEU 1080.0032
VAL 1090.0058
THR 1100.0101
VAL 1110.0126
SER 1120.0145
GLU 1130.0213
ALA 1140.0225
LYS 1150.0152
THR 1160.0145
THR 1170.0204
PRO 1180.0181
PRO 1190.0146
SER 1200.0114
VAL 1210.0070
TYR 1220.0070
PRO 1230.0091
LEU 1240.0051
ALA 1250.0054
PRO 1260.0069
GLY 1270.0172
SER 1280.0212
ALA 1290.0260
ALA 1300.0342
GLN 1330.0398
THR 1340.0384
ASN 1350.0377
SER 1360.0355
MET 1370.0273
VAL 1380.0244
THR 1390.0119
LEU 1400.0119
GLY 1410.0121
CYS 1420.0056
LEU 1430.0064
VAL 1440.0070
LYS 1450.0119
GLY 1460.0143
TYR 1470.0159
PHE 1480.0188
PRO 1490.0181
GLU 1500.0195
PRO 1510.0188
VAL 1520.0163
THR 1530.0190
VAL 1540.0108
THR 1560.0225
TRP 1570.0211
ASN 1620.0285
SER 1630.0370
GLY 1640.0431
SER 1650.0408
LEU 1660.0363
SER 1670.0439
SER 1680.0419
GLY 1690.0264
VAL 1710.0091
HIS 1720.0065
THR 1730.0081
PHE 1740.0091
PRO 1750.0114
ALA 1760.0128
VAL 1770.0232
LEU 1780.0277
GLN 1790.0300
SER 1800.0412
ASP 1830.0277
LEU 1840.0223
TYR 1850.0212
THR 1860.0093
LEU 1870.0077
SER 1880.0057
SER 1890.0083
SER 1900.0087
VAL 1910.0120
THR 1920.0173
VAL 1930.0132
PRO 1940.0208
SER 1950.0303
SER 1960.0264
PRO 1980.0188
ARG 1990.0185
PRO 2000.0202
SER 2020.0186
GLU 2030.0214
THR 2040.0184
VAL 2050.0166
THR 2060.0178
CYS 2080.0173
ASN 2090.0197
VAL 2100.0184
ALA 2110.0219
HIS 2120.0191
PRO 2130.0186
ALA 2140.0184
SER 2150.0202
SER 2160.0243
THR 2170.0202
LYS 2180.0202
VAL 2190.0204
ASP 2200.0191
LYS 2210.0152
LYS 2220.0144
ILE 2230.0138
VAL 2260.0164
PRO 2270.0117
ARG 2280.0050
ASP 2320.0178
CYS 2330.0138
SER 20.0166
VAL 30.0146
LEU 40.0068
SER 50.0036
GLN 60.0073
SER 70.0098
PRO 80.0129
ALA 90.0128
ILE 100.0102
LEU 110.0060
SER 120.0023
ALA 130.0082
SER 140.0186
PRO 150.0224
GLY 160.0266
GLU 170.0215
LYS 180.0185
VAL 190.0134
THR 200.0077
MET 210.0084
THR 220.0103
CYS 230.0052
ARG 240.0061
ALA 250.0100
ARG 260.0261
SER 270.0225
SER 290.0156
VAL 300.0087
SER 310.0068
TYR 320.0040
MET 330.0040
HIS 340.0067
TRP 350.0081
TYR 360.0081
GLN 370.0072
GLN 380.0081
LYS 390.0091
SER 400.0154
GLY 410.0135
SER 420.0070
SER 430.0063
PRO 440.0086
LYS 450.0079
PRO 460.0090
TRP 470.0105
ILE 480.0093
HIS 490.0092
ALA 500.0087
THR 510.0079
SER 520.0116
ASN 530.0146
LEU 540.0171
ALA 550.0187
SER 560.0467
GLY 570.0396
VAL 580.0205
PRO 590.0113
ALA 600.0178
ARG 610.0138
PHE 620.0101
SER 630.0116
GLY 640.0108
SER 650.0118
GLY 660.0096
SER 670.0096
GLY 680.0161
THR 690.0140
SER 700.0114
TYR 710.0041
SER 720.0067
LEU 730.0091
THR 740.0140
ILE 750.0095
SER 760.0165
ARG 770.0221
VAL 780.0137
GLU 790.0179
ALA 800.0168
GLU 810.0145
ASP 820.0061
ALA 830.0061
ALA 840.0062
THR 850.0087
TYR 860.0068
TYR 870.0078
CYS 880.0086
GLN 890.0064
GLN 900.0050
TRP 910.0053
SER 920.0057
SER 930.0081
HIS 940.0094
PRO 950.0105
PRO 960.0087
THR 970.0093
PHE 980.0080
GLY 990.0088
SER 1000.0083
GLY 1010.0104
THR 1020.0090
LYS 1030.0078
LEU 1040.0044
GLU 1050.0056
ILE 1060.0084
LYS 1070.0101
ARG 1080.0102
ALA 1090.0102
ASP 1100.0035
ALA 1110.0074
ALA 1120.0116
PRO 1130.0112
THR 1140.0085
VAL 1150.0109
SER 1160.0057
ILE 1170.0073
PHE 1180.0070
PRO 1190.0083
PRO 1200.0097
SER 1210.0151
SER 1220.0293
GLU 1230.0232
GLN 1240.0198
LEU 1250.0300
THR 1260.0455
SER 1270.0463
GLY 1280.0359
GLY 1290.0254
ALA 1300.0150
SER 1310.0080
VAL 1320.0063
VAL 1330.0076
CYS 1340.0072
PHE 1350.0067
LEU 1360.0076
ASN 1370.0062
ASN 1380.0063
PHE 1390.0074
TYR 1400.0069
PRO 1410.0069
LYS 1420.0109
ASP 1430.0125
ILE 1440.0142
ASN 1450.0178
VAL 1460.0162
LYS 1470.0159
TRP 1480.0135
LYS 1490.0132
ILE 1500.0079
ASP 1510.0075
GLY 1520.0100
SER 1530.0145
GLU 1540.0133
ARG 1550.0135
GLN 1560.0143
ASN 1570.0196
GLY 1580.0066
VAL 1590.0071
LEU 1600.0085
ASN 1610.0100
SER 1620.0105
TRP 1630.0116
THR 1640.0127
ASP 1650.0152
GLN 1660.0123
ASP 1670.0222
SER 1680.0259
LYS 1690.0360
ASP 1700.0187
SER 1710.0103
THR 1720.0076
TYR 1730.0087
SER 1740.0083
MET 1750.0104
SER 1760.0082
SER 1770.0079
THR 1780.0068
LEU 1790.0076
THR 1800.0106
LEU 1810.0111
THR 1820.0257
LYS 1830.0215
ASP 1840.0186
GLU 1850.0150
TYR 1860.0097
GLU 1870.0075
ARG 1880.0122
HIS 1890.0082
ASN 1900.0093
SER 1910.0081
TYR 1920.0096
THR 1930.0131
CYS 1940.0161
GLU 1950.0176
ALA 1960.0186
THR 1970.0174
HIS 1980.0131
LYS 1990.0114
THR 2000.0182
SER 2010.0298
THR 2020.0370
SER 2030.0213
PRO 2040.0212
ILE 2050.0240
VAL 2060.0164
LYS 2070.0140
SER 2080.0132
PHE 2090.0124
ASN 2100.0114
ARG 2110.0099
ASN 2120.0172
GLU 2130.0167
CYS 2140.0200

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.