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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1022
ILE 4210.0413
PHE 4220.0444
ILE 4230.0180
SER 4240.0039
ASN 4250.0082
ASP 4260.0161
LYS 4270.0143
GLU 4280.0174
SER 4290.0163
ILE 4300.0152
LYS 4310.0131
CYS 4320.0071
PRO 4330.0076
CYS 4340.0083
GLU 4350.0099
PRO 4360.0144
GLU 4370.0148
ARG 4380.0164
ILE 4390.0211
SER 4400.0109
GLU 4410.0210
SER 4420.0331
THR 4430.0276
CYS 4440.0115
ASN 4450.0109
PHE 4460.0090
TYR 4470.0120
VAL 4480.0078
CYS 4490.0087
ASN 4500.0092
CYS 4510.0097
VAL 4520.0109
GLU 4530.0114
LYS 4540.0161
GLU 10.0382
VAL 20.0145
GLN 30.0145
LEU 40.0031
VAL 50.0030
GLU 60.0046
SER 70.0079
GLY 80.0089
GLY 90.0096
GLY 100.0103
LEU 110.0108
VAL 120.0109
LYS 130.0166
PRO 140.0135
GLY 150.0175
GLY 160.0175
SER 170.0148
LEU 180.0125
LYS 190.0071
LEU 200.0065
SER 210.0070
CYS 220.0046
ALA 230.0059
ALA 240.0070
SER 250.0159
GLY 260.0178
PHE 270.0103
ILE 280.0069
PHE 290.0069
SER 300.0103
ASP 310.0091
TYR 320.0087
TYR 330.0091
MET 340.0065
TYR 350.0060
TRP 360.0056
VAL 370.0059
ARG 380.0074
GLN 390.0097
THR 400.0163
PRO 410.0315
GLU 420.0354
LYS 430.0183
ARG 440.0141
LEU 450.0069
GLU 460.0084
TRP 470.0066
VAL 480.0054
ALA 490.0053
THR 500.0065
ILE 510.0076
SER 520.0101
ASP 520.0140
GLY 530.0136
ASN 540.0135
SER 550.0107
TYR 560.0079
THR 570.0051
TYR 580.0021
TYR 590.0024
VAL 600.0063
ASP 610.0125
SER 620.0117
VAL 630.0072
LYS 640.0121
GLY 650.0145
ARG 660.0115
PHE 670.0054
THR 680.0050
ILE 690.0060
SER 700.0110
ARG 710.0086
ASP 720.0116
ASN 730.0161
ALA 740.0214
LYS 750.0183
ASN 760.0118
ASN 770.0076
LEU 780.0055
TYR 790.0050
LEU 800.0051
GLN 810.0073
MET 820.0090
SER 820.0130
SER 820.0150
LEU 820.0100
LYS 830.0092
SER 840.0068
GLU 850.0091
ASP 860.0064
THR 870.0072
ALA 880.0088
ILE 890.0095
TYR 900.0076
TYR 910.0048
CYS 920.0042
ALA 930.0046
ARG 940.0044
ASP 950.0059
GLY 960.0060
PRO 970.0055
THR 980.0095
ASP 990.0119
SER 1000.0071
SER 1000.0066
GLY 1000.0079
TYR 1000.0082
GLY 1000.0068
GLY 1000.0050
PHE 1000.0027
GLY 1010.0028
TYR 1020.0012
TRP 1030.0023
GLY 1040.0017
GLN 1050.0016
GLY 1060.0066
THR 1070.0076
LEU 1080.0088
VAL 1090.0084
THR 1100.0088
VAL 1110.0086
SER 1120.0128
GLU 1130.0168
ALA 1140.0170
LYS 1150.0135
THR 1160.0062
THR 1170.0081
PRO 1180.0099
PRO 1190.0105
SER 1200.0091
VAL 1210.0077
TYR 1220.0064
PRO 1230.0037
LEU 1240.0053
ALA 1250.0073
PRO 1260.0088
GLY 1270.0161
SER 1280.0412
ALA 1290.0641
ALA 1300.0184
GLN 1330.0246
THR 1340.0236
ASN 1350.0257
SER 1360.0267
MET 1370.0204
VAL 1380.0149
THR 1390.0076
LEU 1400.0072
GLY 1410.0082
CYS 1420.0066
LEU 1430.0074
VAL 1440.0081
LYS 1450.0088
GLY 1460.0092
TYR 1470.0101
PHE 1480.0090
PRO 1490.0066
GLU 1500.0090
PRO 1510.0139
VAL 1520.0149
THR 1530.0185
VAL 1540.0117
THR 1560.0126
TRP 1570.0140
ASN 1620.0230
SER 1630.0235
GLY 1640.0253
SER 1650.0301
LEU 1660.0224
SER 1670.0191
SER 1680.0104
GLY 1690.0057
VAL 1710.0071
HIS 1720.0077
THR 1730.0082
PHE 1740.0089
PRO 1750.0104
ALA 1760.0118
VAL 1770.0133
LEU 1780.0124
GLN 1790.0134
SER 1800.0220
ASP 1830.0136
LEU 1840.0127
TYR 1850.0134
THR 1860.0084
LEU 1870.0090
SER 1880.0094
SER 1890.0076
SER 1900.0067
VAL 1910.0059
THR 1920.0101
VAL 1930.0111
PRO 1940.0173
SER 1950.0169
SER 1960.0158
PRO 1980.0203
ARG 1990.0138
PRO 2000.0176
SER 2020.0296
GLU 2030.0340
THR 2040.0260
VAL 2050.0136
THR 2060.0131
CYS 2080.0117
ASN 2090.0116
VAL 2100.0130
ALA 2110.0181
HIS 2120.0146
PRO 2130.0153
ALA 2140.0108
SER 2150.0094
SER 2160.0138
THR 2170.0136
LYS 2180.0141
VAL 2190.0114
ASP 2200.0072
LYS 2210.0073
LYS 2220.0065
ILE 2230.0067
VAL 2260.0200
PRO 2270.0179
ARG 2280.0202
ASP 2320.0812
CYS 2330.1022
SER 20.0071
VAL 30.0053
LEU 40.0035
SER 50.0074
GLN 60.0089
SER 70.0126
PRO 80.0158
ALA 90.0162
ILE 100.0148
LEU 110.0114
SER 120.0096
ALA 130.0119
SER 140.0179
PRO 150.0184
GLY 160.0209
GLU 170.0182
LYS 180.0167
VAL 190.0127
THR 200.0080
MET 210.0089
THR 220.0115
CYS 230.0072
ARG 240.0062
ALA 250.0023
ARG 260.0035
SER 270.0088
SER 290.0092
VAL 300.0075
SER 310.0093
TYR 320.0068
MET 330.0048
HIS 340.0036
TRP 350.0043
TYR 360.0042
GLN 370.0050
GLN 380.0044
LYS 390.0054
SER 400.0050
GLY 410.0099
SER 420.0085
SER 430.0059
PRO 440.0048
LYS 450.0059
PRO 460.0050
TRP 470.0062
ILE 480.0059
HIS 490.0046
ALA 500.0050
THR 510.0063
SER 520.0070
ASN 530.0082
LEU 540.0096
ALA 550.0092
SER 560.0281
GLY 570.0233
VAL 580.0129
PRO 590.0087
ALA 600.0143
ARG 610.0135
PHE 620.0077
SER 630.0067
GLY 640.0055
SER 650.0067
GLY 660.0085
SER 670.0103
GLY 680.0114
THR 690.0078
SER 700.0094
TYR 710.0059
SER 720.0075
LEU 730.0073
THR 740.0118
ILE 750.0100
SER 760.0159
ARG 770.0198
VAL 780.0134
GLU 790.0157
ALA 800.0143
GLU 810.0126
ASP 820.0085
ALA 830.0101
ALA 840.0082
THR 850.0075
TYR 860.0048
TYR 870.0038
CYS 880.0035
GLN 890.0029
GLN 900.0039
TRP 910.0048
SER 920.0071
SER 930.0074
HIS 940.0072
PRO 950.0049
PRO 960.0037
THR 970.0038
PHE 980.0019
GLY 990.0013
SER 1000.0028
GLY 1010.0090
THR 1020.0090
LYS 1030.0105
LEU 1040.0106
GLU 1050.0102
ILE 1060.0099
LYS 1070.0143
ARG 1080.0133
ALA 1090.0186
ASP 1100.0176
ALA 1110.0129
ALA 1120.0112
PRO 1130.0066
THR 1140.0048
VAL 1150.0043
SER 1160.0055
ILE 1170.0051
PHE 1180.0061
PRO 1190.0099
PRO 1200.0075
SER 1210.0071
SER 1220.0147
GLU 1230.0138
GLN 1240.0145
LEU 1250.0206
THR 1260.0339
SER 1270.0340
GLY 1280.0215
GLY 1290.0129
ALA 1300.0049
SER 1310.0044
VAL 1320.0042
VAL 1330.0040
CYS 1340.0034
PHE 1350.0042
LEU 1360.0051
ASN 1370.0068
ASN 1380.0065
PHE 1390.0073
TYR 1400.0104
PRO 1410.0151
LYS 1420.0172
ASP 1430.0214
ILE 1440.0129
ASN 1450.0147
VAL 1460.0136
LYS 1470.0170
TRP 1480.0158
LYS 1490.0211
ILE 1500.0174
ASP 1510.0220
GLY 1520.0281
SER 1530.0328
GLU 1540.0276
ARG 1550.0280
GLN 1560.0214
ASN 1570.0234
GLY 1580.0111
VAL 1590.0099
LEU 1600.0092
ASN 1610.0097
SER 1620.0097
TRP 1630.0096
THR 1640.0133
ASP 1650.0151
GLN 1660.0142
ASP 1670.0229
SER 1680.0253
LYS 1690.0341
ASP 1700.0182
SER 1710.0095
THR 1720.0083
TYR 1730.0109
SER 1740.0094
MET 1750.0090
SER 1760.0056
SER 1770.0056
THR 1780.0038
LEU 1790.0080
THR 1800.0066
LEU 1810.0056
THR 1820.0052
LYS 1830.0084
ASP 1840.0167
GLU 1850.0163
TYR 1860.0133
GLU 1870.0159
ARG 1880.0200
HIS 1890.0174
ASN 1900.0159
SER 1910.0141
TYR 1920.0128
THR 1930.0127
CYS 1940.0106
GLU 1950.0129
ALA 1960.0109
THR 1970.0126
HIS 1980.0090
LYS 1990.0153
THR 2000.0158
SER 2010.0138
THR 2020.0129
SER 2030.0220
PRO 2040.0174
ILE 2050.0146
VAL 2060.0082
LYS 2070.0063
SER 2080.0057
PHE 2090.0178
ASN 2100.0187
ARG 2110.0165
ASN 2120.0487
GLU 2130.0570
CYS 2140.0656

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.