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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 42  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0903
ILE 4210.0161
PHE 4220.0321
ILE 4230.0242
SER 4240.0183
ASN 4250.0226
ASP 4260.0212
LYS 4270.0226
GLU 4280.0214
SER 4290.0215
ILE 4300.0167
LYS 4310.0146
CYS 4320.0125
PRO 4330.0084
CYS 4340.0087
GLU 4350.0081
PRO 4360.0161
GLU 4370.0208
ARG 4380.0272
ILE 4390.0424
SER 4400.0282
GLU 4410.0454
SER 4420.0448
THR 4430.0470
CYS 4440.0254
ASN 4450.0178
PHE 4460.0209
TYR 4470.0288
VAL 4480.0224
CYS 4490.0132
ASN 4500.0100
CYS 4510.0065
VAL 4520.0023
GLU 4530.0029
LYS 4540.0048
GLU 10.0548
VAL 20.0272
GLN 30.0193
LEU 40.0108
VAL 50.0104
GLU 60.0103
SER 70.0138
GLY 80.0120
GLY 90.0094
GLY 100.0067
LEU 110.0082
VAL 120.0074
LYS 130.0108
PRO 140.0061
GLY 150.0068
GLY 160.0088
SER 170.0058
LEU 180.0076
LYS 190.0123
LEU 200.0129
SER 210.0177
CYS 220.0169
ALA 230.0214
ALA 240.0226
SER 250.0288
GLY 260.0392
PHE 270.0395
ILE 280.0417
PHE 290.0336
SER 300.0343
ASP 310.0241
TYR 320.0190
TYR 330.0128
MET 340.0101
TYR 350.0085
TRP 360.0067
VAL 370.0044
ARG 380.0059
GLN 390.0075
THR 400.0148
PRO 410.0331
GLU 420.0378
LYS 430.0188
ARG 440.0138
LEU 450.0041
GLU 460.0034
TRP 470.0042
VAL 480.0067
ALA 490.0089
THR 500.0120
ILE 510.0146
SER 520.0195
ASP 520.0204
GLY 530.0230
ASN 540.0238
SER 550.0228
TYR 560.0223
THR 570.0198
TYR 580.0148
TYR 590.0123
VAL 600.0105
ASP 610.0144
SER 620.0117
VAL 630.0098
LYS 640.0129
GLY 650.0103
ARG 660.0060
PHE 670.0049
THR 680.0071
ILE 690.0100
SER 700.0160
ARG 710.0236
ASP 720.0330
ASN 730.0489
ALA 740.0616
LYS 750.0533
ASN 760.0379
ASN 770.0291
LEU 780.0204
TYR 790.0180
LEU 800.0103
GLN 810.0075
MET 820.0026
SER 820.0032
SER 820.0054
LEU 820.0025
LYS 830.0016
SER 840.0021
GLU 850.0050
ASP 860.0048
THR 870.0071
ALA 880.0076
ILE 890.0076
TYR 900.0063
TYR 910.0066
CYS 920.0080
ALA 930.0081
ARG 940.0083
ASP 950.0084
GLY 960.0102
PRO 970.0122
THR 980.0136
ASP 990.0115
SER 1000.0055
SER 1000.0070
GLY 1000.0088
TYR 1000.0066
GLY 1000.0057
GLY 1000.0026
PHE 1000.0045
GLY 1010.0071
TYR 1020.0104
TRP 1030.0052
GLY 1040.0036
GLN 1050.0043
GLY 1060.0057
THR 1070.0061
LEU 1080.0054
VAL 1090.0062
THR 1100.0074
VAL 1110.0068
SER 1120.0138
GLU 1130.0184
ALA 1140.0167
LYS 1150.0146
THR 1160.0085
THR 1170.0062
PRO 1180.0023
PRO 1190.0029
SER 1200.0036
VAL 1210.0047
TYR 1220.0049
PRO 1230.0047
LEU 1240.0033
ALA 1250.0027
PRO 1260.0038
GLY 1270.0049
SER 1280.0083
ALA 1290.0122
ALA 1300.0058
GLN 1330.0118
THR 1340.0094
ASN 1350.0081
SER 1360.0058
MET 1370.0036
VAL 1380.0044
THR 1390.0036
LEU 1400.0037
GLY 1410.0048
CYS 1420.0045
LEU 1430.0043
VAL 1440.0039
LYS 1450.0041
GLY 1460.0036
TYR 1470.0029
PHE 1480.0057
PRO 1490.0052
GLU 1500.0047
PRO 1510.0042
VAL 1520.0047
THR 1530.0066
VAL 1540.0059
THR 1560.0072
TRP 1570.0060
ASN 1620.0087
SER 1630.0105
GLY 1640.0088
SER 1650.0098
LEU 1660.0057
SER 1670.0037
SER 1680.0044
GLY 1690.0031
VAL 1710.0041
HIS 1720.0046
THR 1730.0049
PHE 1740.0033
PRO 1750.0034
ALA 1760.0029
VAL 1770.0043
LEU 1780.0043
GLN 1790.0045
SER 1800.0101
ASP 1830.0085
LEU 1840.0060
TYR 1850.0046
THR 1860.0014
LEU 1870.0015
SER 1880.0029
SER 1890.0046
SER 1900.0038
VAL 1910.0031
THR 1920.0030
VAL 1930.0028
PRO 1940.0033
SER 1950.0039
SER 1960.0039
PRO 1980.0052
ARG 1990.0023
PRO 2000.0023
SER 2020.0085
GLU 2030.0092
THR 2040.0055
VAL 2050.0055
THR 2060.0070
CYS 2080.0072
ASN 2090.0071
VAL 2100.0071
ALA 2110.0046
HIS 2120.0033
PRO 2130.0057
ALA 2140.0048
SER 2150.0060
SER 2160.0075
THR 2170.0046
LYS 2180.0043
VAL 2190.0051
ASP 2200.0074
LYS 2210.0065
LYS 2220.0058
ILE 2230.0038
VAL 2260.0017
PRO 2270.0027
ARG 2280.0037
ASP 2320.0100
CYS 2330.0147
SER 20.0418
VAL 30.0409
LEU 40.0266
SER 50.0208
GLN 60.0122
SER 70.0100
PRO 80.0104
ALA 90.0092
ILE 100.0118
LEU 110.0105
SER 120.0091
ALA 130.0089
SER 140.0095
PRO 150.0097
GLY 160.0098
GLU 170.0066
LYS 180.0072
VAL 190.0070
THR 200.0069
MET 210.0055
THR 220.0083
CYS 230.0172
ARG 240.0302
ALA 250.0375
ARG 260.0903
SER 270.0523
SER 290.0312
VAL 300.0235
SER 310.0164
TYR 320.0131
MET 330.0125
HIS 340.0129
TRP 350.0104
TYR 360.0104
GLN 370.0092
GLN 380.0048
LYS 390.0081
SER 400.0135
GLY 410.0264
SER 420.0183
SER 430.0078
PRO 440.0076
LYS 450.0117
PRO 460.0145
TRP 470.0123
ILE 480.0119
HIS 490.0121
ALA 500.0122
THR 510.0091
SER 520.0075
ASN 530.0127
LEU 540.0134
ALA 550.0156
SER 560.0224
GLY 570.0209
VAL 580.0162
PRO 590.0148
ALA 600.0141
ARG 610.0115
PHE 620.0084
SER 630.0072
GLY 640.0076
SER 650.0082
GLY 660.0157
SER 670.0206
GLY 680.0332
THR 690.0394
SER 700.0318
TYR 710.0128
SER 720.0072
LEU 730.0035
THR 740.0073
ILE 750.0072
SER 760.0071
ARG 770.0109
VAL 780.0098
GLU 790.0102
ALA 800.0084
GLU 810.0079
ASP 820.0088
ALA 830.0075
ALA 840.0074
THR 850.0073
TYR 860.0078
TYR 870.0098
CYS 880.0132
GLN 890.0150
GLN 900.0129
TRP 910.0102
SER 920.0164
SER 930.0112
HIS 940.0073
PRO 950.0102
PRO 960.0147
THR 970.0197
PHE 980.0137
GLY 990.0136
SER 1000.0123
GLY 1010.0093
THR 1020.0084
LYS 1030.0088
LEU 1040.0090
GLU 1050.0076
ILE 1060.0068
LYS 1070.0080
ARG 1080.0087
ALA 1090.0113
ASP 1100.0069
ALA 1110.0075
ALA 1120.0077
PRO 1130.0066
THR 1140.0072
VAL 1150.0079
SER 1160.0067
ILE 1170.0064
PHE 1180.0060
PRO 1190.0037
PRO 1200.0024
SER 1210.0025
SER 1220.0074
GLU 1230.0068
GLN 1240.0057
LEU 1250.0072
THR 1260.0138
SER 1270.0155
GLY 1280.0102
GLY 1290.0067
ALA 1300.0023
SER 1310.0042
VAL 1320.0047
VAL 1330.0058
CYS 1340.0070
PHE 1350.0066
LEU 1360.0073
ASN 1370.0077
ASN 1380.0065
PHE 1390.0056
TYR 1400.0035
PRO 1410.0011
LYS 1420.0034
ASP 1430.0032
ILE 1440.0049
ASN 1450.0068
VAL 1460.0057
LYS 1470.0026
TRP 1480.0022
LYS 1490.0055
ILE 1500.0041
ASP 1510.0041
GLY 1520.0193
SER 1530.0207
GLU 1540.0217
ARG 1550.0139
GLN 1560.0134
ASN 1570.0159
GLY 1580.0087
VAL 1590.0077
LEU 1600.0082
ASN 1610.0056
SER 1620.0058
TRP 1630.0069
THR 1640.0082
ASP 1650.0097
GLN 1660.0055
ASP 1670.0081
SER 1680.0063
LYS 1690.0147
ASP 1700.0095
SER 1710.0041
THR 1720.0048
TYR 1730.0049
SER 1740.0066
MET 1750.0075
SER 1760.0068
SER 1770.0059
THR 1780.0056
LEU 1790.0046
THR 1800.0035
LEU 1810.0033
THR 1820.0050
LYS 1830.0015
ASP 1840.0016
GLU 1850.0039
TYR 1860.0036
GLU 1870.0040
ARG 1880.0057
HIS 1890.0045
ASN 1900.0035
SER 1910.0033
TYR 1920.0033
THR 1930.0033
CYS 1940.0043
GLU 1950.0041
ALA 1960.0065
THR 1970.0057
HIS 1980.0040
LYS 1990.0030
THR 2000.0054
SER 2010.0060
THR 2020.0061
SER 2030.0057
PRO 2040.0062
ILE 2050.0067
VAL 2060.0056
LYS 2070.0060
SER 2080.0052
PHE 2090.0051
ASN 2100.0047
ARG 2110.0041
ASN 2120.0054
GLU 2130.0069
CYS 2140.0077

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.