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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 43  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0888
ILE 4210.0111
PHE 4220.0067
ILE 4230.0106
SER 4240.0138
ASN 4250.0162
ASP 4260.0168
LYS 4270.0112
GLU 4280.0123
SER 4290.0112
ILE 4300.0096
LYS 4310.0109
CYS 4320.0099
PRO 4330.0091
CYS 4340.0089
GLU 4350.0089
PRO 4360.0088
GLU 4370.0085
ARG 4380.0108
ILE 4390.0189
SER 4400.0145
GLU 4410.0187
SER 4420.0177
THR 4430.0258
CYS 4440.0129
ASN 4450.0124
PHE 4460.0142
TYR 4470.0149
VAL 4480.0082
CYS 4490.0071
ASN 4500.0069
CYS 4510.0084
VAL 4520.0128
GLU 4530.0154
LYS 4540.0261
GLU 10.0213
VAL 20.0115
GLN 30.0118
LEU 40.0060
VAL 50.0048
GLU 60.0024
SER 70.0031
GLY 80.0055
GLY 90.0060
GLY 100.0072
LEU 110.0089
VAL 120.0093
LYS 130.0124
PRO 140.0147
GLY 150.0145
GLY 160.0143
SER 170.0118
LEU 180.0092
LYS 190.0075
LEU 200.0045
SER 210.0036
CYS 220.0036
ALA 230.0052
ALA 240.0033
SER 250.0069
GLY 260.0065
PHE 270.0042
ILE 280.0097
PHE 290.0081
SER 300.0117
ASP 310.0100
TYR 320.0092
TYR 330.0095
MET 340.0081
TYR 350.0081
TRP 360.0072
VAL 370.0066
ARG 380.0049
GLN 390.0043
THR 400.0072
PRO 410.0221
GLU 420.0251
LYS 430.0111
ARG 440.0082
LEU 450.0035
GLU 460.0068
TRP 470.0075
VAL 480.0071
ALA 490.0095
THR 500.0097
ILE 510.0088
SER 520.0114
ASP 520.0104
GLY 530.0106
ASN 540.0129
SER 550.0116
TYR 560.0115
THR 570.0125
TYR 580.0099
TYR 590.0105
VAL 600.0119
ASP 610.0182
SER 620.0120
VAL 630.0075
LYS 640.0140
GLY 650.0162
ARG 660.0111
PHE 670.0055
THR 680.0070
ILE 690.0058
SER 700.0079
ARG 710.0084
ASP 720.0127
ASN 730.0174
ALA 740.0233
LYS 750.0196
ASN 760.0099
ASN 770.0077
LEU 780.0045
TYR 790.0051
LEU 800.0041
GLN 810.0073
MET 820.0075
SER 820.0108
SER 820.0125
LEU 820.0105
LYS 830.0110
SER 840.0123
GLU 850.0084
ASP 860.0052
THR 870.0061
ALA 880.0032
ILE 890.0042
TYR 900.0036
TYR 910.0053
CYS 920.0064
ALA 930.0079
ARG 940.0096
ASP 950.0083
GLY 960.0080
PRO 970.0098
THR 980.0062
ASP 990.0044
SER 1000.0034
SER 1000.0032
GLY 1000.0034
TYR 1000.0035
GLY 1000.0054
GLY 1000.0056
PHE 1000.0073
GLY 1010.0068
TYR 1020.0085
TRP 1030.0072
GLY 1040.0056
GLN 1050.0047
GLY 1060.0045
THR 1070.0034
LEU 1080.0044
VAL 1090.0058
THR 1100.0085
VAL 1110.0098
SER 1120.0105
GLU 1130.0106
ALA 1140.0099
LYS 1150.0077
THR 1160.0087
THR 1170.0085
PRO 1180.0055
PRO 1190.0052
SER 1200.0056
VAL 1210.0058
TYR 1220.0041
PRO 1230.0055
LEU 1240.0084
ALA 1250.0101
PRO 1260.0138
GLY 1270.0125
SER 1280.0084
ALA 1290.0236
ALA 1300.0150
GLN 1330.0341
THR 1340.0280
ASN 1350.0180
SER 1360.0254
MET 1370.0210
VAL 1380.0166
THR 1390.0124
LEU 1400.0114
GLY 1410.0110
CYS 1420.0072
LEU 1430.0073
VAL 1440.0067
LYS 1450.0062
GLY 1460.0047
TYR 1470.0038
PHE 1480.0053
PRO 1490.0064
GLU 1500.0063
PRO 1510.0024
VAL 1520.0044
THR 1530.0078
VAL 1540.0071
THR 1560.0130
TRP 1570.0151
ASN 1620.0254
SER 1630.0286
GLY 1640.0291
SER 1650.0325
LEU 1660.0253
SER 1670.0234
SER 1680.0327
GLY 1690.0243
VAL 1710.0135
HIS 1720.0137
THR 1730.0125
PHE 1740.0111
PRO 1750.0115
ALA 1760.0131
VAL 1770.0106
LEU 1780.0195
GLN 1790.0355
SER 1800.0574
ASP 1830.0176
LEU 1840.0131
TYR 1850.0066
THR 1860.0104
LEU 1870.0098
SER 1880.0096
SER 1890.0124
SER 1900.0138
VAL 1910.0142
THR 1920.0122
VAL 1930.0182
PRO 1940.0223
SER 1950.0204
SER 1960.0192
PRO 1980.0171
ARG 1990.0130
PRO 2000.0241
SER 2020.0464
GLU 2030.0387
THR 2040.0193
VAL 2050.0101
THR 2060.0101
CYS 2080.0127
ASN 2090.0150
VAL 2100.0115
ALA 2110.0112
HIS 2120.0087
PRO 2130.0097
ALA 2140.0106
SER 2150.0139
SER 2160.0159
THR 2170.0148
LYS 2180.0171
VAL 2190.0181
ASP 2200.0157
LYS 2210.0087
LYS 2220.0094
ILE 2230.0088
VAL 2260.0135
PRO 2270.0139
ARG 2280.0145
ASP 2320.0274
CYS 2330.0266
SER 20.0177
VAL 30.0148
LEU 40.0068
SER 50.0045
GLN 60.0093
SER 70.0138
PRO 80.0136
ALA 90.0169
ILE 100.0146
LEU 110.0167
SER 120.0169
ALA 130.0138
SER 140.0185
PRO 150.0187
GLY 160.0164
GLU 170.0125
LYS 180.0087
VAL 190.0094
THR 200.0121
MET 210.0120
THR 220.0126
CYS 230.0086
ARG 240.0038
ALA 250.0071
ARG 260.0185
SER 270.0261
SER 290.0194
VAL 300.0131
SER 310.0147
TYR 320.0050
MET 330.0038
HIS 340.0065
TRP 350.0082
TYR 360.0075
GLN 370.0070
GLN 380.0054
LYS 390.0056
SER 400.0118
GLY 410.0107
SER 420.0055
SER 430.0016
PRO 440.0061
LYS 450.0062
PRO 460.0079
TRP 470.0107
ILE 480.0084
HIS 490.0079
ALA 500.0063
THR 510.0081
SER 520.0114
ASN 530.0119
LEU 540.0144
ALA 550.0156
SER 560.0468
GLY 570.0399
VAL 580.0200
PRO 590.0092
ALA 600.0097
ARG 610.0031
PHE 620.0092
SER 630.0095
GLY 640.0107
SER 650.0152
GLY 660.0136
SER 670.0142
GLY 680.0193
THR 690.0122
SER 700.0111
TYR 710.0086
SER 720.0111
LEU 730.0130
THR 740.0105
ILE 750.0068
SER 760.0070
ARG 770.0117
VAL 780.0121
GLU 790.0180
ALA 800.0150
GLU 810.0143
ASP 820.0110
ALA 830.0089
ALA 840.0087
THR 850.0099
TYR 860.0072
TYR 870.0073
CYS 880.0078
GLN 890.0063
GLN 900.0030
TRP 910.0044
SER 920.0073
SER 930.0109
HIS 940.0117
PRO 950.0101
PRO 960.0069
THR 970.0088
PHE 980.0066
GLY 990.0059
SER 1000.0049
GLY 1010.0135
THR 1020.0110
LYS 1030.0109
LEU 1040.0136
GLU 1050.0160
ILE 1060.0157
LYS 1070.0209
ARG 1080.0181
ALA 1090.0178
ASP 1100.0148
ALA 1110.0119
ALA 1120.0110
PRO 1130.0109
THR 1140.0148
VAL 1150.0163
SER 1160.0166
ILE 1170.0149
PHE 1180.0151
PRO 1190.0087
PRO 1200.0036
SER 1210.0056
SER 1220.0331
GLU 1230.0297
GLN 1240.0280
LEU 1250.0441
THR 1260.0791
SER 1270.0888
GLY 1280.0595
GLY 1290.0412
ALA 1300.0152
SER 1310.0135
VAL 1320.0140
VAL 1330.0174
CYS 1340.0168
PHE 1350.0158
LEU 1360.0140
ASN 1370.0111
ASN 1380.0076
PHE 1390.0058
TYR 1400.0090
PRO 1410.0105
LYS 1420.0102
ASP 1430.0073
ILE 1440.0097
ASN 1450.0127
VAL 1460.0088
LYS 1470.0047
TRP 1480.0049
LYS 1490.0177
ILE 1500.0072
ASP 1510.0116
GLY 1520.0504
SER 1530.0602
GLU 1540.0567
ARG 1550.0339
GLN 1560.0287
ASN 1570.0343
GLY 1580.0135
VAL 1590.0125
LEU 1600.0188
ASN 1610.0151
SER 1620.0137
TRP 1630.0119
THR 1640.0096
ASP 1650.0110
GLN 1660.0093
ASP 1670.0142
SER 1680.0179
LYS 1690.0203
ASP 1700.0108
SER 1710.0116
THR 1720.0067
TYR 1730.0038
SER 1740.0080
MET 1750.0134
SER 1760.0171
SER 1770.0160
THR 1780.0161
LEU 1790.0153
THR 1800.0133
LEU 1810.0129
THR 1820.0292
LYS 1830.0161
ASP 1840.0097
GLU 1850.0136
TYR 1860.0106
GLU 1870.0127
ARG 1880.0199
HIS 1890.0134
ASN 1900.0115
SER 1910.0125
TYR 1920.0110
THR 1930.0146
CYS 1940.0118
GLU 1950.0133
ALA 1960.0152
THR 1970.0159
HIS 1980.0126
LYS 1990.0105
THR 2000.0101
SER 2010.0209
THR 2020.0458
SER 2030.0179
PRO 2040.0177
ILE 2050.0140
VAL 2060.0181
LYS 2070.0173
SER 2080.0138
PHE 2090.0117
ASN 2100.0104
ARG 2110.0131
ASN 2120.0202
GLU 2130.0198
CYS 2140.0183

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.