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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 44  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0689
ILE 4210.0172
PHE 4220.0188
ILE 4230.0147
SER 4240.0228
ASN 4250.0255
ASP 4260.0306
LYS 4270.0246
GLU 4280.0236
SER 4290.0224
ILE 4300.0176
LYS 4310.0174
CYS 4320.0176
PRO 4330.0125
CYS 4340.0142
GLU 4350.0159
PRO 4360.0198
GLU 4370.0187
ARG 4380.0197
ILE 4390.0214
SER 4400.0142
GLU 4410.0121
SER 4420.0293
THR 4430.0316
CYS 4440.0263
ASN 4450.0233
PHE 4460.0242
TYR 4470.0258
VAL 4480.0130
CYS 4490.0137
ASN 4500.0136
CYS 4510.0077
VAL 4520.0053
GLU 4530.0067
LYS 4540.0047
GLU 10.0578
VAL 20.0195
GLN 30.0235
LEU 40.0073
VAL 50.0062
GLU 60.0047
SER 70.0083
GLY 80.0065
GLY 90.0067
GLY 100.0155
LEU 110.0143
VAL 120.0161
LYS 130.0254
PRO 140.0188
GLY 150.0125
GLY 160.0077
SER 170.0105
LEU 180.0120
LYS 190.0095
LEU 200.0079
SER 210.0079
CYS 220.0066
ALA 230.0055
ALA 240.0056
SER 250.0200
GLY 260.0245
PHE 270.0124
ILE 280.0061
PHE 290.0034
SER 300.0099
ASP 310.0114
TYR 320.0120
TYR 330.0142
MET 340.0097
TYR 350.0095
TRP 360.0089
VAL 370.0024
ARG 380.0025
GLN 390.0037
THR 400.0055
PRO 410.0083
GLU 420.0049
LYS 430.0048
ARG 440.0029
LEU 450.0008
GLU 460.0055
TRP 470.0053
VAL 480.0047
ALA 490.0106
THR 500.0114
ILE 510.0114
SER 520.0161
ASP 520.0166
GLY 530.0165
ASN 540.0164
SER 550.0125
TYR 560.0133
THR 570.0133
TYR 580.0081
TYR 590.0075
VAL 600.0105
ASP 610.0250
SER 620.0233
VAL 630.0162
LYS 640.0229
GLY 650.0251
ARG 660.0193
PHE 670.0110
THR 680.0110
ILE 690.0093
SER 700.0083
ARG 710.0044
ASP 720.0030
ASN 730.0091
ALA 740.0150
LYS 750.0134
ASN 760.0071
ASN 770.0039
LEU 780.0059
TYR 790.0079
LEU 800.0095
GLN 810.0106
MET 820.0132
SER 820.0129
SER 820.0123
LEU 820.0102
LYS 830.0162
SER 840.0202
GLU 850.0179
ASP 860.0118
THR 870.0124
ALA 880.0053
ILE 890.0051
TYR 900.0044
TYR 910.0057
CYS 920.0063
ALA 930.0067
ARG 940.0100
ASP 950.0113
GLY 960.0117
PRO 970.0177
THR 980.0143
ASP 990.0107
SER 1000.0102
SER 1000.0099
GLY 1000.0103
TYR 1000.0103
GLY 1000.0089
GLY 1000.0084
PHE 1000.0070
GLY 1010.0073
TYR 1020.0061
TRP 1030.0043
GLY 1040.0035
GLN 1050.0035
GLY 1060.0059
THR 1070.0053
LEU 1080.0062
VAL 1090.0084
THR 1100.0103
VAL 1110.0119
SER 1120.0184
GLU 1130.0303
ALA 1140.0164
LYS 1150.0127
THR 1160.0121
THR 1170.0141
PRO 1180.0114
PRO 1190.0115
SER 1200.0123
VAL 1210.0067
TYR 1220.0035
PRO 1230.0042
LEU 1240.0053
ALA 1250.0053
PRO 1260.0050
GLY 1270.0032
SER 1280.0143
ALA 1290.0279
ALA 1300.0071
GLN 1330.0128
THR 1340.0134
ASN 1350.0125
SER 1360.0162
MET 1370.0106
VAL 1380.0055
THR 1390.0056
LEU 1400.0058
GLY 1410.0061
CYS 1420.0021
LEU 1430.0048
VAL 1440.0069
LYS 1450.0117
GLY 1460.0115
TYR 1470.0117
PHE 1480.0107
PRO 1490.0100
GLU 1500.0128
PRO 1510.0150
VAL 1520.0125
THR 1530.0109
VAL 1540.0032
THR 1560.0037
TRP 1570.0047
ASN 1620.0083
SER 1630.0108
GLY 1640.0139
SER 1650.0162
LEU 1660.0128
SER 1670.0136
SER 1680.0139
GLY 1690.0099
VAL 1710.0068
HIS 1720.0047
THR 1730.0031
PHE 1740.0029
PRO 1750.0061
ALA 1760.0101
VAL 1770.0120
LEU 1780.0123
GLN 1790.0122
SER 1800.0125
ASP 1830.0092
LEU 1840.0112
TYR 1850.0145
THR 1860.0099
LEU 1870.0063
SER 1880.0017
SER 1890.0036
SER 1900.0049
VAL 1910.0056
THR 1920.0048
VAL 1930.0065
PRO 1940.0108
SER 1950.0106
SER 1960.0125
PRO 1980.0090
ARG 1990.0050
PRO 2000.0089
SER 2020.0187
GLU 2030.0183
THR 2040.0128
VAL 2050.0053
THR 2060.0034
CYS 2080.0016
ASN 2090.0024
VAL 2100.0060
ALA 2110.0110
HIS 2120.0127
PRO 2130.0144
ALA 2140.0136
SER 2150.0129
SER 2160.0122
THR 2170.0122
LYS 2180.0095
VAL 2190.0054
ASP 2200.0017
LYS 2210.0031
LYS 2220.0041
ILE 2230.0061
VAL 2260.0070
PRO 2270.0055
ARG 2280.0046
ASP 2320.0281
CYS 2330.0358
SER 20.0428
VAL 30.0390
LEU 40.0254
SER 50.0169
GLN 60.0150
SER 70.0209
PRO 80.0174
ALA 90.0174
ILE 100.0167
LEU 110.0133
SER 120.0174
ALA 130.0201
SER 140.0285
PRO 150.0303
GLY 160.0333
GLU 170.0249
LYS 180.0118
VAL 190.0076
THR 200.0155
MET 210.0130
THR 220.0127
CYS 230.0163
ARG 240.0167
ALA 250.0233
ARG 260.0689
SER 270.0614
SER 290.0395
VAL 300.0298
SER 310.0282
TYR 320.0099
MET 330.0090
HIS 340.0093
TRP 350.0048
TYR 360.0047
GLN 370.0061
GLN 380.0078
LYS 390.0111
SER 400.0117
GLY 410.0190
SER 420.0128
SER 430.0051
PRO 440.0068
LYS 450.0077
PRO 460.0076
TRP 470.0095
ILE 480.0088
HIS 490.0111
ALA 500.0147
THR 510.0146
SER 520.0177
ASN 530.0221
LEU 540.0222
ALA 550.0228
SER 560.0575
GLY 570.0528
VAL 580.0267
PRO 590.0262
ALA 600.0230
ARG 610.0128
PHE 620.0105
SER 630.0151
GLY 640.0167
SER 650.0205
GLY 660.0179
SER 670.0212
GLY 680.0260
THR 690.0183
SER 700.0103
TYR 710.0093
SER 720.0117
LEU 730.0119
THR 740.0126
ILE 750.0070
SER 760.0084
ARG 770.0227
VAL 780.0195
GLU 790.0262
ALA 800.0197
GLU 810.0178
ASP 820.0152
ALA 830.0141
ALA 840.0120
THR 850.0094
TYR 860.0041
TYR 870.0033
CYS 880.0055
GLN 890.0101
GLN 900.0075
TRP 910.0054
SER 920.0072
SER 930.0082
HIS 940.0078
PRO 950.0013
PRO 960.0028
THR 970.0082
PHE 980.0061
GLY 990.0081
SER 1000.0086
GLY 1010.0081
THR 1020.0085
LYS 1030.0122
LEU 1040.0149
GLU 1050.0147
ILE 1060.0152
LYS 1070.0115
ARG 1080.0022
ALA 1090.0126
ASP 1100.0165
ALA 1110.0158
ALA 1120.0152
PRO 1130.0115
THR 1140.0110
VAL 1150.0088
SER 1160.0066
ILE 1170.0058
PHE 1180.0056
PRO 1190.0056
PRO 1200.0042
SER 1210.0056
SER 1220.0162
GLU 1230.0123
GLN 1240.0107
LEU 1250.0209
THR 1260.0364
SER 1270.0378
GLY 1280.0249
GLY 1290.0148
ALA 1300.0029
SER 1310.0009
VAL 1320.0035
VAL 1330.0046
CYS 1340.0065
PHE 1350.0073
LEU 1360.0082
ASN 1370.0101
ASN 1380.0112
PHE 1390.0110
TYR 1400.0105
PRO 1410.0089
LYS 1420.0063
ASP 1430.0099
ILE 1440.0102
ASN 1450.0113
VAL 1460.0074
LYS 1470.0064
TRP 1480.0050
LYS 1490.0061
ILE 1500.0054
ASP 1510.0051
GLY 1520.0053
SER 1530.0063
GLU 1540.0056
ARG 1550.0050
GLN 1560.0035
ASN 1570.0041
GLY 1580.0037
VAL 1590.0033
LEU 1600.0026
ASN 1610.0036
SER 1620.0024
TRP 1630.0020
THR 1640.0047
ASP 1650.0112
GLN 1660.0099
ASP 1670.0134
SER 1680.0177
LYS 1690.0210
ASP 1700.0143
SER 1710.0063
THR 1720.0068
TYR 1730.0041
SER 1740.0061
MET 1750.0061
SER 1760.0046
SER 1770.0041
THR 1780.0032
LEU 1790.0027
THR 1800.0012
LEU 1810.0010
THR 1820.0041
LYS 1830.0080
ASP 1840.0078
GLU 1850.0070
TYR 1860.0068
GLU 1870.0101
ARG 1880.0090
HIS 1890.0060
ASN 1900.0026
SER 1910.0025
TYR 1920.0041
THR 1930.0051
CYS 1940.0068
GLU 1950.0081
ALA 1960.0101
THR 1970.0140
HIS 1980.0142
LYS 1990.0148
THR 2000.0116
SER 2010.0157
THR 2020.0388
SER 2030.0190
PRO 2040.0130
ILE 2050.0060
VAL 2060.0061
LYS 2070.0042
SER 2080.0031
PHE 2090.0041
ASN 2100.0040
ARG 2110.0036
ASN 2120.0169
GLU 2130.0211
CYS 2140.0257

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.