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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 45  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0890
ILE 4210.0091
PHE 4220.0117
ILE 4230.0038
SER 4240.0046
ASN 4250.0058
ASP 4260.0075
LYS 4270.0044
GLU 4280.0044
SER 4290.0051
ILE 4300.0045
LYS 4310.0028
CYS 4320.0009
PRO 4330.0020
CYS 4340.0025
GLU 4350.0033
PRO 4360.0037
GLU 4370.0040
ARG 4380.0046
ILE 4390.0067
SER 4400.0045
GLU 4410.0063
SER 4420.0119
THR 4430.0059
CYS 4440.0046
ASN 4450.0049
PHE 4460.0041
TYR 4470.0045
VAL 4480.0023
CYS 4490.0010
ASN 4500.0019
CYS 4510.0032
VAL 4520.0043
GLU 4530.0044
LYS 4540.0076
GLU 10.0136
VAL 20.0059
GLN 30.0057
LEU 40.0040
VAL 50.0041
GLU 60.0031
SER 70.0010
GLY 80.0013
GLY 90.0024
GLY 100.0028
LEU 110.0044
VAL 120.0071
LYS 130.0145
PRO 140.0142
GLY 150.0149
GLY 160.0138
SER 170.0114
LEU 180.0086
LYS 190.0039
LEU 200.0015
SER 210.0019
CYS 220.0043
ALA 230.0055
ALA 240.0047
SER 250.0048
GLY 260.0072
PHE 270.0084
ILE 280.0092
PHE 290.0071
SER 300.0092
ASP 310.0075
TYR 320.0056
TYR 330.0034
MET 340.0020
TYR 350.0019
TRP 360.0017
VAL 370.0014
ARG 380.0008
GLN 390.0022
THR 400.0061
PRO 410.0172
GLU 420.0230
LYS 430.0124
ARG 440.0111
LEU 450.0061
GLU 460.0030
TRP 470.0036
VAL 480.0033
ALA 490.0036
THR 500.0031
ILE 510.0020
SER 520.0033
ASP 520.0050
GLY 530.0048
ASN 540.0032
SER 550.0016
TYR 560.0017
THR 570.0037
TYR 580.0055
TYR 590.0062
VAL 600.0072
ASP 610.0111
SER 620.0076
VAL 630.0079
LYS 640.0121
GLY 650.0154
ARG 660.0130
PHE 670.0080
THR 680.0071
ILE 690.0043
SER 700.0026
ARG 710.0047
ASP 720.0089
ASN 730.0141
ALA 740.0185
LYS 750.0157
ASN 760.0089
ASN 770.0068
LEU 780.0038
TYR 790.0023
LEU 800.0031
GLN 810.0067
MET 820.0098
SER 820.0123
SER 820.0130
LEU 820.0109
LYS 830.0103
SER 840.0108
GLU 850.0072
ASP 860.0059
THR 870.0064
ALA 880.0030
ILE 890.0024
TYR 900.0016
TYR 910.0011
CYS 920.0015
ALA 930.0017
ARG 940.0031
ASP 950.0035
GLY 960.0041
PRO 970.0050
THR 980.0043
ASP 990.0043
SER 1000.0032
SER 1000.0027
GLY 1000.0025
TYR 1000.0019
GLY 1000.0013
GLY 1000.0013
PHE 1000.0013
GLY 1010.0017
TYR 1020.0016
TRP 1030.0015
GLY 1040.0019
GLN 1050.0021
GLY 1060.0011
THR 1070.0007
LEU 1080.0025
VAL 1090.0043
THR 1100.0066
VAL 1110.0088
SER 1120.0099
GLU 1130.0140
ALA 1140.0059
LYS 1150.0058
THR 1160.0075
THR 1170.0093
PRO 1180.0116
PRO 1190.0118
SER 1200.0142
VAL 1210.0123
TYR 1220.0183
PRO 1230.0210
LEU 1240.0206
ALA 1250.0225
PRO 1260.0208
GLY 1270.0176
SER 1280.0379
ALA 1290.0890
ALA 1300.0472
GLN 1330.0540
THR 1340.0405
ASN 1350.0319
SER 1360.0516
MET 1370.0301
VAL 1380.0105
THR 1390.0229
LEU 1400.0232
GLY 1410.0244
CYS 1420.0184
LEU 1430.0173
VAL 1440.0130
LYS 1450.0135
GLY 1460.0122
TYR 1470.0097
PHE 1480.0073
PRO 1490.0072
GLU 1500.0084
PRO 1510.0072
VAL 1520.0062
THR 1530.0090
VAL 1540.0182
THR 1560.0297
TRP 1570.0298
ASN 1620.0362
SER 1630.0464
GLY 1640.0591
SER 1650.0520
LEU 1660.0492
SER 1670.0587
SER 1680.0616
GLY 1690.0541
VAL 1710.0275
HIS 1720.0217
THR 1730.0183
PHE 1740.0074
PRO 1750.0029
ALA 1760.0020
VAL 1770.0114
LEU 1780.0139
GLN 1790.0182
SER 1800.0326
ASP 1830.0106
LEU 1840.0070
TYR 1850.0063
THR 1860.0107
LEU 1870.0099
SER 1880.0135
SER 1890.0230
SER 1900.0264
VAL 1910.0284
THR 1920.0388
VAL 1930.0310
PRO 1940.0286
SER 1950.0313
SER 1960.0434
PRO 1980.0317
ARG 1990.0184
PRO 2000.0123
SER 2020.0163
GLU 2030.0239
THR 2040.0279
VAL 2050.0275
THR 2060.0218
CYS 2080.0191
ASN 2090.0145
VAL 2100.0090
ALA 2110.0028
HIS 2120.0045
PRO 2130.0063
ALA 2140.0078
SER 2150.0110
SER 2160.0090
THR 2170.0090
LYS 2180.0050
VAL 2190.0009
ASP 2200.0061
LYS 2210.0141
LYS 2220.0197
ILE 2230.0265
VAL 2260.0273
PRO 2270.0327
ARG 2280.0318
ASP 2320.0488
CYS 2330.0432
SER 20.0036
VAL 30.0044
LEU 40.0040
SER 50.0047
GLN 60.0049
SER 70.0051
PRO 80.0072
ALA 90.0083
ILE 100.0077
LEU 110.0069
SER 120.0061
ALA 130.0058
SER 140.0070
PRO 150.0057
GLY 160.0052
GLU 170.0045
LYS 180.0023
VAL 190.0034
THR 200.0040
MET 210.0045
THR 220.0043
CYS 230.0042
ARG 240.0039
ALA 250.0036
ARG 260.0054
SER 270.0050
SER 290.0037
VAL 300.0025
SER 310.0015
TYR 320.0006
MET 330.0019
HIS 340.0031
TRP 350.0043
TYR 360.0044
GLN 370.0045
GLN 380.0034
LYS 390.0031
SER 400.0070
GLY 410.0099
SER 420.0055
SER 430.0012
PRO 440.0029
LYS 450.0036
PRO 460.0049
TRP 470.0053
ILE 480.0040
HIS 490.0033
ALA 500.0028
THR 510.0023
SER 520.0024
ASN 530.0041
LEU 540.0050
ALA 550.0066
SER 560.0223
GLY 570.0175
VAL 580.0080
PRO 590.0071
ALA 600.0083
ARG 610.0063
PHE 620.0046
SER 630.0048
GLY 640.0049
SER 650.0024
GLY 660.0026
SER 670.0028
GLY 680.0029
THR 690.0038
SER 700.0035
TYR 710.0033
SER 720.0037
LEU 730.0041
THR 740.0043
ILE 750.0038
SER 760.0042
ARG 770.0045
VAL 780.0028
GLU 790.0045
ALA 800.0037
GLU 810.0033
ASP 820.0030
ALA 830.0026
ALA 840.0031
THR 850.0044
TYR 860.0047
TYR 870.0048
CYS 880.0052
GLN 890.0033
GLN 900.0019
TRP 910.0018
SER 920.0031
SER 930.0034
HIS 940.0033
PRO 950.0040
PRO 960.0029
THR 970.0026
PHE 980.0053
GLY 990.0057
SER 1000.0050
GLY 1010.0063
THR 1020.0057
LYS 1030.0050
LEU 1040.0046
GLU 1050.0036
ILE 1060.0035
LYS 1070.0061
ARG 1080.0091
ALA 1090.0143
ASP 1100.0156
ALA 1110.0159
ALA 1120.0189
PRO 1130.0137
THR 1140.0122
VAL 1150.0130
SER 1160.0099
ILE 1170.0102
PHE 1180.0111
PRO 1190.0182
PRO 1200.0160
SER 1210.0215
SER 1220.0330
GLU 1230.0268
GLN 1240.0201
LEU 1250.0274
THR 1260.0362
SER 1270.0302
GLY 1280.0211
GLY 1290.0134
ALA 1300.0163
SER 1310.0130
VAL 1320.0119
VAL 1330.0108
CYS 1340.0115
PHE 1350.0078
LEU 1360.0095
ASN 1370.0111
ASN 1380.0081
PHE 1390.0105
TYR 1400.0114
PRO 1410.0114
LYS 1420.0106
ASP 1430.0126
ILE 1440.0159
ASN 1450.0183
VAL 1460.0246
LYS 1470.0209
TRP 1480.0182
LYS 1490.0253
ILE 1500.0264
ASP 1510.0217
GLY 1520.0338
SER 1530.0292
GLU 1540.0411
ARG 1550.0381
GLN 1560.0368
ASN 1570.0399
GLY 1580.0247
VAL 1590.0226
LEU 1600.0214
ASN 1610.0041
SER 1620.0056
TRP 1630.0070
THR 1640.0084
ASP 1650.0063
GLN 1660.0048
ASP 1670.0070
SER 1680.0067
LYS 1690.0079
ASP 1700.0018
SER 1710.0024
THR 1720.0060
TYR 1730.0081
SER 1740.0091
MET 1750.0091
SER 1760.0081
SER 1770.0071
THR 1780.0116
LEU 1790.0205
THR 1800.0189
LEU 1810.0181
THR 1820.0141
LYS 1830.0153
ASP 1840.0122
GLU 1850.0193
TYR 1860.0184
GLU 1870.0142
ARG 1880.0164
HIS 1890.0191
ASN 1900.0162
SER 1910.0129
TYR 1920.0178
THR 1930.0175
CYS 1940.0191
GLU 1950.0193
ALA 1960.0221
THR 1970.0193
HIS 1980.0165
LYS 1990.0161
THR 2000.0245
SER 2010.0378
THR 2020.0523
SER 2030.0212
PRO 2040.0214
ILE 2050.0282
VAL 2060.0198
LYS 2070.0184
SER 2080.0167
PHE 2090.0171
ASN 2100.0131
ARG 2110.0139
ASN 2120.0159
GLU 2130.0185
CYS 2140.0279

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.