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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 46  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0802
ILE 4210.0046
PHE 4220.0034
ILE 4230.0057
SER 4240.0064
ASN 4250.0075
ASP 4260.0085
LYS 4270.0061
GLU 4280.0068
SER 4290.0057
ILE 4300.0051
LYS 4310.0054
CYS 4320.0050
PRO 4330.0053
CYS 4340.0054
GLU 4350.0060
PRO 4360.0034
GLU 4370.0031
ARG 4380.0041
ILE 4390.0068
SER 4400.0049
GLU 4410.0037
SER 4420.0116
THR 4430.0077
CYS 4440.0040
ASN 4450.0061
PHE 4460.0060
TYR 4470.0062
VAL 4480.0050
CYS 4490.0048
ASN 4500.0072
CYS 4510.0095
VAL 4520.0132
GLU 4530.0145
LYS 4540.0250
GLU 10.0289
VAL 20.0205
GLN 30.0174
LEU 40.0086
VAL 50.0090
GLU 60.0061
SER 70.0056
GLY 80.0035
GLY 90.0036
GLY 100.0034
LEU 110.0030
VAL 120.0016
LYS 130.0047
PRO 140.0082
GLY 150.0111
GLY 160.0088
SER 170.0083
LEU 180.0054
LYS 190.0059
LEU 200.0063
SER 210.0069
CYS 220.0089
ALA 230.0113
ALA 240.0080
SER 250.0085
GLY 260.0083
PHE 270.0139
ILE 280.0190
PHE 290.0147
SER 300.0210
ASP 310.0159
TYR 320.0119
TYR 330.0089
MET 340.0077
TYR 350.0080
TRP 360.0083
VAL 370.0091
ARG 380.0069
GLN 390.0071
THR 400.0157
PRO 410.0531
GLU 420.0699
LYS 430.0366
ARG 440.0279
LEU 450.0096
GLU 460.0037
TRP 470.0055
VAL 480.0073
ALA 490.0088
THR 500.0086
ILE 510.0085
SER 520.0101
ASP 520.0118
GLY 530.0112
ASN 540.0104
SER 550.0095
TYR 560.0081
THR 570.0086
TYR 580.0079
TYR 590.0102
VAL 600.0124
ASP 610.0246
SER 620.0220
VAL 630.0158
LYS 640.0203
GLY 650.0194
ARG 660.0153
PHE 670.0106
THR 680.0094
ILE 690.0081
SER 700.0128
ARG 710.0141
ASP 720.0216
ASN 730.0300
ALA 740.0408
LYS 750.0348
ASN 760.0171
ASN 770.0148
LEU 780.0091
TYR 790.0080
LEU 800.0080
GLN 810.0078
MET 820.0096
SER 820.0107
SER 820.0118
LEU 820.0094
LYS 830.0107
SER 840.0099
GLU 850.0103
ASP 860.0093
THR 870.0091
ALA 880.0067
ILE 890.0082
TYR 900.0090
TYR 910.0070
CYS 920.0081
ALA 930.0086
ARG 940.0086
ASP 950.0071
GLY 960.0068
PRO 970.0070
THR 980.0073
ASP 990.0056
SER 1000.0048
SER 1000.0059
GLY 1000.0075
TYR 1000.0065
GLY 1000.0060
GLY 1000.0044
PHE 1000.0047
GLY 1010.0040
TYR 1020.0051
TRP 1030.0078
GLY 1040.0076
GLN 1050.0075
GLY 1060.0077
THR 1070.0047
LEU 1080.0025
VAL 1090.0046
THR 1100.0047
VAL 1110.0045
SER 1120.0034
GLU 1130.0028
ALA 1140.0040
LYS 1150.0073
THR 1160.0086
THR 1170.0065
PRO 1180.0034
PRO 1190.0026
SER 1200.0047
VAL 1210.0089
TYR 1220.0112
PRO 1230.0162
LEU 1240.0153
ALA 1250.0150
PRO 1260.0142
GLY 1270.0106
SER 1280.0188
ALA 1290.0532
ALA 1300.0299
GLN 1330.0465
THR 1340.0235
ASN 1350.0104
SER 1360.0218
MET 1370.0232
VAL 1380.0248
THR 1390.0182
LEU 1400.0174
GLY 1410.0182
CYS 1420.0151
LEU 1430.0124
VAL 1440.0104
LYS 1450.0045
GLY 1460.0017
TYR 1470.0024
PHE 1480.0056
PRO 1490.0072
GLU 1500.0079
PRO 1510.0127
VAL 1520.0095
THR 1530.0141
VAL 1540.0181
THR 1560.0203
TRP 1570.0162
ASN 1620.0144
SER 1630.0197
GLY 1640.0248
SER 1650.0183
LEU 1660.0160
SER 1670.0226
SER 1680.0266
GLY 1690.0256
VAL 1710.0200
HIS 1720.0131
THR 1730.0147
PHE 1740.0076
PRO 1750.0081
ALA 1760.0074
VAL 1770.0050
LEU 1780.0031
GLN 1790.0017
SER 1800.0038
ASP 1830.0030
LEU 1840.0014
TYR 1850.0038
THR 1860.0073
LEU 1870.0098
SER 1880.0120
SER 1890.0162
SER 1900.0166
VAL 1910.0181
THR 1920.0210
VAL 1930.0152
PRO 1940.0139
SER 1950.0194
SER 1960.0085
PRO 1980.0209
ARG 1990.0255
PRO 2000.0433
SER 2020.0802
GLU 2030.0614
THR 2040.0292
VAL 2050.0099
THR 2060.0137
CYS 2080.0175
ASN 2090.0156
VAL 2100.0149
ALA 2110.0102
HIS 2120.0076
PRO 2130.0134
ALA 2140.0167
SER 2150.0124
SER 2160.0120
THR 2170.0028
LYS 2180.0083
VAL 2190.0152
ASP 2200.0165
LYS 2210.0178
LYS 2220.0142
ILE 2230.0172
VAL 2260.0189
PRO 2270.0149
ARG 2280.0149
ASP 2320.0131
CYS 2330.0280
SER 20.0238
VAL 30.0192
LEU 40.0108
SER 50.0088
GLN 60.0053
SER 70.0085
PRO 80.0131
ALA 90.0157
ILE 100.0202
LEU 110.0214
SER 120.0213
ALA 130.0176
SER 140.0171
PRO 150.0149
GLY 160.0225
GLU 170.0237
LYS 180.0230
VAL 190.0243
THR 200.0111
MET 210.0116
THR 220.0113
CYS 230.0095
ARG 240.0117
ALA 250.0090
ARG 260.0569
SER 270.0231
SER 290.0128
VAL 300.0136
SER 310.0192
TYR 320.0101
MET 330.0076
HIS 340.0069
TRP 350.0084
TYR 360.0071
GLN 370.0065
GLN 380.0065
LYS 390.0084
SER 400.0169
GLY 410.0241
SER 420.0160
SER 430.0057
PRO 440.0035
LYS 450.0056
PRO 460.0071
TRP 470.0099
ILE 480.0097
HIS 490.0097
ALA 500.0133
THR 510.0134
SER 520.0155
ASN 530.0134
LEU 540.0120
ALA 550.0105
SER 560.0180
GLY 570.0191
VAL 580.0129
PRO 590.0112
ALA 600.0118
ARG 610.0135
PHE 620.0128
SER 630.0143
GLY 640.0168
SER 650.0192
GLY 660.0201
SER 670.0212
GLY 680.0133
THR 690.0090
SER 700.0162
TYR 710.0129
SER 720.0136
LEU 730.0143
THR 740.0192
ILE 750.0159
SER 760.0164
ARG 770.0230
VAL 780.0168
GLU 790.0113
ALA 800.0089
GLU 810.0091
ASP 820.0104
ALA 830.0116
ALA 840.0100
THR 850.0084
TYR 860.0073
TYR 870.0060
CYS 880.0061
GLN 890.0009
GLN 900.0043
TRP 910.0063
SER 920.0106
SER 930.0120
HIS 940.0112
PRO 950.0084
PRO 960.0063
THR 970.0061
PHE 980.0062
GLY 990.0083
SER 1000.0090
GLY 1010.0089
THR 1020.0101
LYS 1030.0136
LEU 1040.0168
GLU 1050.0164
ILE 1060.0120
LYS 1070.0131
ARG 1080.0073
ALA 1090.0054
ASP 1100.0162
ALA 1110.0168
ALA 1120.0162
PRO 1130.0121
THR 1140.0104
VAL 1150.0088
SER 1160.0013
ILE 1170.0012
PHE 1180.0058
PRO 1190.0082
PRO 1200.0074
SER 1210.0118
SER 1220.0185
GLU 1230.0128
GLN 1240.0067
LEU 1250.0179
THR 1260.0273
SER 1270.0254
GLY 1280.0221
GLY 1290.0132
ALA 1300.0067
SER 1310.0040
VAL 1320.0026
VAL 1330.0033
CYS 1340.0046
PHE 1350.0029
LEU 1360.0057
ASN 1370.0084
ASN 1380.0108
PHE 1390.0139
TYR 1400.0148
PRO 1410.0143
LYS 1420.0155
ASP 1430.0138
ILE 1440.0125
ASN 1450.0109
VAL 1460.0073
LYS 1470.0052
TRP 1480.0043
LYS 1490.0047
ILE 1500.0085
ASP 1510.0117
GLY 1520.0133
SER 1530.0082
GLU 1540.0097
ARG 1550.0046
GLN 1560.0032
ASN 1570.0018
GLY 1580.0004
VAL 1590.0012
LEU 1600.0011
ASN 1610.0012
SER 1620.0017
TRP 1630.0045
THR 1640.0052
ASP 1650.0058
GLN 1660.0082
ASP 1670.0114
SER 1680.0074
LYS 1690.0105
ASP 1700.0098
SER 1710.0095
THR 1720.0117
TYR 1730.0106
SER 1740.0087
MET 1750.0067
SER 1760.0022
SER 1770.0021
THR 1780.0018
LEU 1790.0035
THR 1800.0050
LEU 1810.0056
THR 1820.0089
LYS 1830.0124
ASP 1840.0119
GLU 1850.0105
TYR 1860.0109
GLU 1870.0151
ARG 1880.0156
HIS 1890.0142
ASN 1900.0147
SER 1910.0103
TYR 1920.0080
THR 1930.0057
CYS 1940.0100
GLU 1950.0108
ALA 1960.0118
THR 1970.0140
HIS 1980.0143
LYS 1990.0142
THR 2000.0229
SER 2010.0303
THR 2020.0512
SER 2030.0261
PRO 2040.0200
ILE 2050.0158
VAL 2060.0131
LYS 2070.0123
SER 2080.0110
PHE 2090.0072
ASN 2100.0090
ARG 2110.0134
ASN 2120.0128
GLU 2130.0127
CYS 2140.0189

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.