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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 47  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0768
ILE 4210.0096
PHE 4220.0124
ILE 4230.0036
SER 4240.0078
ASN 4250.0112
ASP 4260.0135
LYS 4270.0117
GLU 4280.0118
SER 4290.0116
ILE 4300.0065
LYS 4310.0062
CYS 4320.0020
PRO 4330.0043
CYS 4340.0024
GLU 4350.0041
PRO 4360.0067
GLU 4370.0080
ARG 4380.0102
ILE 4390.0179
SER 4400.0127
GLU 4410.0204
SER 4420.0243
THR 4430.0115
CYS 4440.0135
ASN 4450.0091
PHE 4460.0092
TYR 4470.0113
VAL 4480.0032
CYS 4490.0030
ASN 4500.0079
CYS 4510.0126
VAL 4520.0173
GLU 4530.0185
LYS 4540.0309
GLU 10.0169
VAL 20.0073
GLN 30.0090
LEU 40.0013
VAL 50.0015
GLU 60.0019
SER 70.0042
GLY 80.0051
GLY 90.0054
GLY 100.0063
LEU 110.0046
VAL 120.0037
LYS 130.0044
PRO 140.0038
GLY 150.0040
GLY 160.0020
SER 170.0034
LEU 180.0049
LYS 190.0040
LEU 200.0038
SER 210.0034
CYS 220.0018
ALA 230.0057
ALA 240.0046
SER 250.0084
GLY 260.0037
PHE 270.0060
ILE 280.0127
PHE 290.0108
SER 300.0154
ASP 310.0130
TYR 320.0096
TYR 330.0065
MET 340.0046
TYR 350.0045
TRP 360.0046
VAL 370.0061
ARG 380.0068
GLN 390.0069
THR 400.0096
PRO 410.0168
GLU 420.0162
LYS 430.0109
ARG 440.0078
LEU 450.0035
GLU 460.0042
TRP 470.0045
VAL 480.0061
ALA 490.0039
THR 500.0041
ILE 510.0045
SER 520.0073
ASP 520.0126
GLY 530.0144
ASN 540.0124
SER 550.0094
TYR 560.0059
THR 570.0035
TYR 580.0047
TYR 590.0048
VAL 600.0048
ASP 610.0063
SER 620.0064
VAL 630.0068
LYS 640.0061
GLY 650.0075
ARG 660.0077
PHE 670.0068
THR 680.0063
ILE 690.0055
SER 700.0096
ARG 710.0099
ASP 720.0155
ASN 730.0238
ALA 740.0312
LYS 750.0264
ASN 760.0140
ASN 770.0099
LEU 780.0048
TYR 790.0042
LEU 800.0050
GLN 810.0057
MET 820.0074
SER 820.0060
SER 820.0047
LEU 820.0053
LYS 830.0051
SER 840.0059
GLU 850.0081
ASP 860.0087
THR 870.0096
ALA 880.0083
ILE 890.0084
TYR 900.0080
TYR 910.0049
CYS 920.0049
ALA 930.0047
ARG 940.0037
ASP 950.0032
GLY 960.0045
PRO 970.0019
THR 980.0006
ASP 990.0025
SER 1000.0030
SER 1000.0035
GLY 1000.0048
TYR 1000.0048
GLY 1000.0042
GLY 1000.0028
PHE 1000.0021
GLY 1010.0018
TYR 1020.0026
TRP 1030.0029
GLY 1040.0030
GLN 1050.0030
GLY 1060.0059
THR 1070.0060
LEU 1080.0064
VAL 1090.0078
THR 1100.0066
VAL 1110.0050
SER 1120.0082
GLU 1130.0094
ALA 1140.0104
LYS 1150.0119
THR 1160.0102
THR 1170.0123
PRO 1180.0123
PRO 1190.0137
SER 1200.0185
VAL 1210.0164
TYR 1220.0152
PRO 1230.0128
LEU 1240.0067
ALA 1250.0033
PRO 1260.0083
GLY 1270.0200
SER 1280.0400
ALA 1290.0768
ALA 1300.0364
GLN 1330.0260
THR 1340.0177
ASN 1350.0194
SER 1360.0206
MET 1370.0210
VAL 1380.0230
THR 1390.0155
LEU 1400.0125
GLY 1410.0123
CYS 1420.0139
LEU 1430.0149
VAL 1440.0144
LYS 1450.0174
GLY 1460.0146
TYR 1470.0120
PHE 1480.0082
PRO 1490.0056
GLU 1500.0061
PRO 1510.0079
VAL 1520.0072
THR 1530.0099
VAL 1540.0112
THR 1560.0125
TRP 1570.0165
ASN 1620.0182
SER 1630.0149
GLY 1640.0340
SER 1650.0591
LEU 1660.0544
SER 1670.0617
SER 1680.0690
GLY 1690.0423
VAL 1710.0241
HIS 1720.0184
THR 1730.0175
PHE 1740.0112
PRO 1750.0120
ALA 1760.0099
VAL 1770.0069
LEU 1780.0070
GLN 1790.0175
SER 1800.0430
ASP 1830.0132
LEU 1840.0118
TYR 1850.0100
THR 1860.0106
LEU 1870.0118
SER 1880.0138
SER 1890.0135
SER 1900.0172
VAL 1910.0227
THR 1920.0301
VAL 1930.0191
PRO 1940.0121
SER 1950.0177
SER 1960.0200
PRO 1980.0225
ARG 1990.0224
PRO 2000.0335
SER 2020.0637
GLU 2030.0433
THR 2040.0165
VAL 2050.0183
THR 2060.0169
CYS 2080.0133
ASN 2090.0068
VAL 2100.0057
ALA 2110.0059
HIS 2120.0060
PRO 2130.0110
ALA 2140.0116
SER 2150.0142
SER 2160.0176
THR 2170.0135
LYS 2180.0114
VAL 2190.0136
ASP 2200.0116
LYS 2210.0161
LYS 2220.0169
ILE 2230.0113
VAL 2260.0156
PRO 2270.0215
ARG 2280.0237
ASP 2320.0264
CYS 2330.0567
SER 20.0161
VAL 30.0105
LEU 40.0048
SER 50.0111
GLN 60.0100
SER 70.0133
PRO 80.0086
ALA 90.0089
ILE 100.0081
LEU 110.0099
SER 120.0119
ALA 130.0112
SER 140.0129
PRO 150.0099
GLY 160.0135
GLU 170.0160
LYS 180.0119
VAL 190.0123
THR 200.0101
MET 210.0110
THR 220.0135
CYS 230.0125
ARG 240.0130
ALA 250.0063
ARG 260.0213
SER 270.0145
SER 290.0201
VAL 300.0175
SER 310.0216
TYR 320.0108
MET 330.0084
HIS 340.0064
TRP 350.0051
TYR 360.0030
GLN 370.0025
GLN 380.0027
LYS 390.0025
SER 400.0017
GLY 410.0029
SER 420.0025
SER 430.0028
PRO 440.0015
LYS 450.0009
PRO 460.0019
TRP 470.0041
ILE 480.0049
HIS 490.0053
ALA 500.0103
THR 510.0110
SER 520.0116
ASN 530.0066
LEU 540.0055
ALA 550.0043
SER 560.0069
GLY 570.0060
VAL 580.0042
PRO 590.0015
ALA 600.0019
ARG 610.0036
PHE 620.0051
SER 630.0075
GLY 640.0105
SER 650.0190
GLY 660.0237
SER 670.0279
GLY 680.0254
THR 690.0182
SER 700.0225
TYR 710.0153
SER 720.0150
LEU 730.0133
THR 740.0089
ILE 750.0065
SER 760.0064
ARG 770.0115
VAL 780.0093
GLU 790.0054
ALA 800.0044
GLU 810.0060
ASP 820.0076
ALA 830.0093
ALA 840.0055
THR 850.0043
TYR 860.0033
TYR 870.0029
CYS 880.0039
GLN 890.0039
GLN 900.0071
TRP 910.0089
SER 920.0139
SER 930.0145
HIS 940.0139
PRO 950.0107
PRO 960.0074
THR 970.0053
PHE 980.0016
GLY 990.0045
SER 1000.0063
GLY 1010.0056
THR 1020.0053
LYS 1030.0061
LEU 1040.0092
GLU 1050.0096
ILE 1060.0089
LYS 1070.0114
ARG 1080.0078
ALA 1090.0072
ASP 1100.0144
ALA 1110.0128
ALA 1120.0116
PRO 1130.0091
THR 1140.0113
VAL 1150.0103
SER 1160.0076
ILE 1170.0127
PHE 1180.0126
PRO 1190.0154
PRO 1200.0112
SER 1210.0064
SER 1220.0162
GLU 1230.0137
GLN 1240.0157
LEU 1250.0185
THR 1260.0405
SER 1270.0488
GLY 1280.0264
GLY 1290.0192
ALA 1300.0123
SER 1310.0131
VAL 1320.0153
VAL 1330.0151
CYS 1340.0131
PHE 1350.0087
LEU 1360.0072
ASN 1370.0102
ASN 1380.0122
PHE 1390.0105
TYR 1400.0113
PRO 1410.0102
LYS 1420.0099
ASP 1430.0133
ILE 1440.0094
ASN 1450.0138
VAL 1460.0158
LYS 1470.0116
TRP 1480.0109
LYS 1490.0083
ILE 1500.0078
ASP 1510.0174
GLY 1520.0427
SER 1530.0418
GLU 1540.0404
ARG 1550.0233
GLN 1560.0231
ASN 1570.0324
GLY 1580.0196
VAL 1590.0180
LEU 1600.0187
ASN 1610.0107
SER 1620.0027
TRP 1630.0059
THR 1640.0120
ASP 1650.0128
GLN 1660.0124
ASP 1670.0164
SER 1680.0203
LYS 1690.0220
ASP 1700.0176
SER 1710.0131
THR 1720.0120
TYR 1730.0088
SER 1740.0074
MET 1750.0041
SER 1760.0080
SER 1770.0126
THR 1780.0166
LEU 1790.0169
THR 1800.0140
LEU 1810.0122
THR 1820.0163
LYS 1830.0069
ASP 1840.0067
GLU 1850.0120
TYR 1860.0145
GLU 1870.0137
ARG 1880.0166
HIS 1890.0177
ASN 1900.0216
SER 1910.0211
TYR 1920.0171
THR 1930.0150
CYS 1940.0155
GLU 1950.0128
ALA 1960.0144
THR 1970.0142
HIS 1980.0108
LYS 1990.0149
THR 2000.0161
SER 2010.0141
THR 2020.0222
SER 2030.0133
PRO 2040.0153
ILE 2050.0151
VAL 2060.0141
LYS 2070.0155
SER 2080.0153
PHE 2090.0229
ASN 2100.0231
ARG 2110.0244
ASN 2120.0355
GLU 2130.0326
CYS 2140.0381

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.