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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0796
ILE 4210.0278
PHE 4220.0351
ILE 4230.0021
SER 4240.0147
ASN 4250.0221
ASP 4260.0264
LYS 4270.0187
GLU 4280.0199
SER 4290.0232
ILE 4300.0162
LYS 4310.0124
CYS 4320.0072
PRO 4330.0042
CYS 4340.0061
GLU 4350.0086
PRO 4360.0164
GLU 4370.0181
ARG 4380.0220
ILE 4390.0370
SER 4400.0268
GLU 4410.0395
SER 4420.0439
THR 4430.0243
CYS 4440.0214
ASN 4450.0197
PHE 4460.0196
TYR 4470.0226
VAL 4480.0096
CYS 4490.0055
ASN 4500.0031
CYS 4510.0073
VAL 4520.0097
GLU 4530.0103
LYS 4540.0198
GLU 10.0796
VAL 20.0369
GLN 30.0357
LEU 40.0170
VAL 50.0161
GLU 60.0130
SER 70.0158
GLY 80.0094
GLY 90.0117
GLY 100.0197
LEU 110.0173
VAL 120.0195
LYS 130.0245
PRO 140.0208
GLY 150.0189
GLY 160.0125
SER 170.0121
LEU 180.0118
LYS 190.0073
LEU 200.0123
SER 210.0159
CYS 220.0192
ALA 230.0239
ALA 240.0260
SER 250.0234
GLY 260.0321
PHE 270.0296
ILE 280.0232
PHE 290.0193
SER 300.0189
ASP 310.0160
TYR 320.0143
TYR 330.0124
MET 340.0105
TYR 350.0108
TRP 360.0112
VAL 370.0131
ARG 380.0108
GLN 390.0088
THR 400.0200
PRO 410.0444
GLU 420.0690
LYS 430.0357
ARG 440.0331
LEU 450.0192
GLU 460.0116
TRP 470.0133
VAL 480.0155
ALA 490.0106
THR 500.0101
ILE 510.0078
SER 520.0098
ASP 520.0138
GLY 530.0129
ASN 540.0086
SER 550.0071
TYR 560.0034
THR 570.0053
TYR 580.0090
TYR 590.0130
VAL 600.0180
ASP 610.0293
SER 620.0268
VAL 630.0187
LYS 640.0219
GLY 650.0210
ARG 660.0164
PHE 670.0103
THR 680.0065
ILE 690.0084
SER 700.0097
ARG 710.0143
ASP 720.0198
ASN 730.0170
ALA 740.0251
LYS 750.0348
ASN 760.0236
ASN 770.0221
LEU 780.0174
TYR 790.0146
LEU 800.0111
GLN 810.0060
MET 820.0129
SER 820.0130
SER 820.0153
LEU 820.0162
LYS 830.0199
SER 840.0222
GLU 850.0195
ASP 860.0174
THR 870.0192
ALA 880.0126
ILE 890.0122
TYR 900.0129
TYR 910.0085
CYS 920.0096
ALA 930.0119
ARG 940.0079
ASP 950.0077
GLY 960.0061
PRO 970.0036
THR 980.0065
ASP 990.0065
SER 1000.0026
SER 1000.0019
GLY 1000.0014
TYR 1000.0018
GLY 1000.0018
GLY 1000.0022
PHE 1000.0023
GLY 1010.0026
TYR 1020.0028
TRP 1030.0072
GLY 1040.0076
GLN 1050.0091
GLY 1060.0137
THR 1070.0115
LEU 1080.0126
VAL 1090.0178
THR 1100.0173
VAL 1110.0175
SER 1120.0147
GLU 1130.0170
ALA 1140.0068
LYS 1150.0028
THR 1160.0069
THR 1170.0074
PRO 1180.0089
PRO 1190.0100
SER 1200.0088
VAL 1210.0060
TYR 1220.0078
PRO 1230.0089
LEU 1240.0070
ALA 1250.0056
PRO 1260.0037
GLY 1270.0036
SER 1280.0143
ALA 1290.0327
ALA 1300.0128
GLN 1330.0120
THR 1340.0095
ASN 1350.0057
SER 1360.0130
MET 1370.0107
VAL 1380.0085
THR 1390.0047
LEU 1400.0052
GLY 1410.0057
CYS 1420.0065
LEU 1430.0074
VAL 1440.0076
LYS 1450.0096
GLY 1460.0090
TYR 1470.0095
PHE 1480.0097
PRO 1490.0104
GLU 1500.0143
PRO 1510.0185
VAL 1520.0157
THR 1530.0166
VAL 1540.0112
THR 1560.0093
TRP 1570.0065
ASN 1620.0066
SER 1630.0106
GLY 1640.0126
SER 1650.0096
LEU 1660.0055
SER 1670.0078
SER 1680.0064
GLY 1690.0068
VAL 1710.0040
HIS 1720.0029
THR 1730.0049
PHE 1740.0033
PRO 1750.0063
ALA 1760.0117
VAL 1770.0130
LEU 1780.0132
GLN 1790.0127
SER 1800.0129
ASP 1830.0094
LEU 1840.0103
TYR 1850.0136
THR 1860.0098
LEU 1870.0082
SER 1880.0059
SER 1890.0039
SER 1900.0034
VAL 1910.0035
THR 1920.0056
VAL 1930.0058
PRO 1940.0076
SER 1950.0081
SER 1960.0026
PRO 1980.0054
ARG 1990.0070
PRO 2000.0138
SER 2020.0274
GLU 2030.0214
THR 2040.0097
VAL 2050.0023
THR 2060.0049
CYS 2080.0089
ASN 2090.0091
VAL 2100.0112
ALA 2110.0149
HIS 2120.0148
PRO 2130.0167
ALA 2140.0169
SER 2150.0121
SER 2160.0132
THR 2170.0112
LYS 2180.0103
VAL 2190.0086
ASP 2200.0071
LYS 2210.0084
LYS 2220.0063
ILE 2230.0085
VAL 2260.0110
PRO 2270.0070
ARG 2280.0055
ASP 2320.0220
CYS 2330.0349
SER 20.0242
VAL 30.0196
LEU 40.0120
SER 50.0087
GLN 60.0126
SER 70.0220
PRO 80.0239
ALA 90.0207
ILE 100.0171
LEU 110.0104
SER 120.0066
ALA 130.0035
SER 140.0130
PRO 150.0134
GLY 160.0178
GLU 170.0122
LYS 180.0037
VAL 190.0092
THR 200.0203
MET 210.0184
THR 220.0208
CYS 230.0156
ARG 240.0167
ALA 250.0183
ARG 260.0248
SER 270.0320
SER 290.0283
VAL 300.0220
SER 310.0213
TYR 320.0084
MET 330.0084
HIS 340.0080
TRP 350.0059
TYR 360.0036
GLN 370.0031
GLN 380.0038
LYS 390.0075
SER 400.0118
GLY 410.0066
SER 420.0024
SER 430.0063
PRO 440.0037
LYS 450.0039
PRO 460.0040
TRP 470.0054
ILE 480.0066
HIS 490.0067
ALA 500.0117
THR 510.0113
SER 520.0121
ASN 530.0134
LEU 540.0123
ALA 550.0114
SER 560.0221
GLY 570.0194
VAL 580.0117
PRO 590.0139
ALA 600.0143
ARG 610.0115
PHE 620.0094
SER 630.0133
GLY 640.0159
SER 650.0210
GLY 660.0250
SER 670.0304
GLY 680.0334
THR 690.0271
SER 700.0260
TYR 710.0176
SER 720.0177
LEU 730.0162
THR 740.0157
ILE 750.0080
SER 760.0075
ARG 770.0130
VAL 780.0071
GLU 790.0115
ALA 800.0068
GLU 810.0041
ASP 820.0052
ALA 830.0045
ALA 840.0034
THR 850.0025
TYR 860.0043
TYR 870.0054
CYS 880.0077
GLN 890.0087
GLN 900.0082
TRP 910.0082
SER 920.0132
SER 930.0124
HIS 940.0126
PRO 950.0106
PRO 960.0096
THR 970.0118
PHE 980.0103
GLY 990.0095
SER 1000.0111
GLY 1010.0081
THR 1020.0092
LYS 1030.0074
LEU 1040.0049
GLU 1050.0040
ILE 1060.0040
LYS 1070.0093
ARG 1080.0115
ALA 1090.0168
ASP 1100.0136
ALA 1110.0114
ALA 1120.0083
PRO 1130.0064
THR 1140.0076
VAL 1150.0109
SER 1160.0106
ILE 1170.0105
PHE 1180.0088
PRO 1190.0095
PRO 1200.0089
SER 1210.0102
SER 1220.0114
GLU 1230.0103
GLN 1240.0097
LEU 1250.0102
THR 1260.0112
SER 1270.0109
GLY 1280.0080
GLY 1290.0083
ALA 1300.0085
SER 1310.0066
VAL 1320.0070
VAL 1330.0082
CYS 1340.0071
PHE 1350.0061
LEU 1360.0068
ASN 1370.0060
ASN 1380.0061
PHE 1390.0056
TYR 1400.0085
PRO 1410.0076
LYS 1420.0054
ASP 1430.0070
ILE 1440.0073
ASN 1450.0082
VAL 1460.0094
LYS 1470.0079
TRP 1480.0083
LYS 1490.0118
ILE 1500.0110
ASP 1510.0143
GLY 1520.0231
SER 1530.0253
GLU 1540.0185
ARG 1550.0080
GLN 1560.0033
ASN 1570.0027
GLY 1580.0028
VAL 1590.0041
LEU 1600.0064
ASN 1610.0065
SER 1620.0047
TRP 1630.0043
THR 1640.0056
ASP 1650.0074
GLN 1660.0068
ASP 1670.0155
SER 1680.0191
LYS 1690.0323
ASP 1700.0206
SER 1710.0113
THR 1720.0086
TYR 1730.0044
SER 1740.0045
MET 1750.0060
SER 1760.0053
SER 1770.0064
THR 1780.0063
LEU 1790.0072
THR 1800.0068
LEU 1810.0061
THR 1820.0076
LYS 1830.0084
ASP 1840.0058
GLU 1850.0068
TYR 1860.0084
GLU 1870.0072
ARG 1880.0078
HIS 1890.0109
ASN 1900.0128
SER 1910.0156
TYR 1920.0148
THR 1930.0161
CYS 1940.0131
GLU 1950.0119
ALA 1960.0116
THR 1970.0056
HIS 1980.0050
LYS 1990.0069
THR 2000.0028
SER 2010.0121
THR 2020.0244
SER 2030.0143
PRO 2040.0114
ILE 2050.0152
VAL 2060.0144
LYS 2070.0152
SER 2080.0155
PHE 2090.0141
ASN 2100.0124
ARG 2110.0104
ASN 2120.0112
GLU 2130.0151
CYS 2140.0204

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.