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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 49  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0814
ILE 4210.0093
PHE 4220.0067
ILE 4230.0150
SER 4240.0167
ASN 4250.0188
ASP 4260.0192
LYS 4270.0156
GLU 4280.0106
SER 4290.0102
ILE 4300.0038
LYS 4310.0052
CYS 4320.0077
PRO 4330.0114
CYS 4340.0093
GLU 4350.0077
PRO 4360.0117
GLU 4370.0156
ARG 4380.0188
ILE 4390.0203
SER 4400.0054
GLU 4410.0172
SER 4420.0549
THR 4430.0114
CYS 4440.0356
ASN 4450.0212
PHE 4460.0180
TYR 4470.0196
VAL 4480.0119
CYS 4490.0093
ASN 4500.0168
CYS 4510.0224
VAL 4520.0299
GLU 4530.0314
LYS 4540.0547
GLU 10.0067
VAL 20.0041
GLN 30.0084
LEU 40.0064
VAL 50.0054
GLU 60.0032
SER 70.0057
GLY 80.0102
GLY 90.0146
GLY 100.0210
LEU 110.0155
VAL 120.0184
LYS 130.0202
PRO 140.0103
GLY 150.0214
GLY 160.0159
SER 170.0127
LEU 180.0122
LYS 190.0070
LEU 200.0042
SER 210.0014
CYS 220.0052
ALA 230.0078
ALA 240.0080
SER 250.0076
GLY 260.0036
PHE 270.0054
ILE 280.0073
PHE 290.0044
SER 300.0083
ASP 310.0097
TYR 320.0054
TYR 330.0020
MET 340.0031
TYR 350.0038
TRP 360.0035
VAL 370.0037
ARG 380.0062
GLN 390.0093
THR 400.0152
PRO 410.0203
GLU 420.0245
LYS 430.0136
ARG 440.0099
LEU 450.0061
GLU 460.0066
TRP 470.0067
VAL 480.0061
ALA 490.0094
THR 500.0074
ILE 510.0056
SER 520.0036
ASP 520.0078
GLY 530.0152
ASN 540.0183
SER 550.0156
TYR 560.0144
THR 570.0170
TYR 580.0144
TYR 590.0142
VAL 600.0154
ASP 610.0277
SER 620.0188
VAL 630.0070
LYS 640.0150
GLY 650.0161
ARG 660.0094
PHE 670.0039
THR 680.0065
ILE 690.0050
SER 700.0012
ARG 710.0044
ASP 720.0103
ASN 730.0141
ALA 740.0203
LYS 750.0200
ASN 760.0109
ASN 770.0089
LEU 780.0050
TYR 790.0022
LEU 800.0016
GLN 810.0053
MET 820.0122
SER 820.0143
SER 820.0163
LEU 820.0162
LYS 830.0175
SER 840.0187
GLU 850.0187
ASP 860.0163
THR 870.0163
ALA 880.0142
ILE 890.0115
TYR 900.0072
TYR 910.0027
CYS 920.0030
ALA 930.0042
ARG 940.0043
ASP 950.0066
GLY 960.0098
PRO 970.0142
THR 980.0161
ASP 990.0183
SER 1000.0106
SER 1000.0081
GLY 1000.0066
TYR 1000.0078
GLY 1000.0067
GLY 1000.0080
PHE 1000.0071
GLY 1010.0073
TYR 1020.0060
TRP 1030.0044
GLY 1040.0043
GLN 1050.0044
GLY 1060.0078
THR 1070.0095
LEU 1080.0142
VAL 1090.0167
THR 1100.0142
VAL 1110.0139
SER 1120.0088
GLU 1130.0330
ALA 1140.0324
LYS 1150.0398
THR 1160.0234
THR 1170.0126
PRO 1180.0074
PRO 1190.0127
SER 1200.0150
VAL 1210.0141
TYR 1220.0146
PRO 1230.0153
LEU 1240.0096
ALA 1250.0111
PRO 1260.0114
GLY 1270.0111
SER 1280.0091
ALA 1290.0140
ALA 1300.0146
GLN 1330.0228
THR 1340.0245
ASN 1350.0263
SER 1360.0281
MET 1370.0224
VAL 1380.0127
THR 1390.0145
LEU 1400.0119
GLY 1410.0123
CYS 1420.0130
LEU 1430.0132
VAL 1440.0138
LYS 1450.0144
GLY 1460.0108
TYR 1470.0084
PHE 1480.0033
PRO 1490.0022
GLU 1500.0093
PRO 1510.0142
VAL 1520.0157
THR 1530.0186
VAL 1540.0198
THR 1560.0270
TRP 1570.0171
ASN 1620.0236
SER 1630.0427
GLY 1640.0615
SER 1650.0814
LEU 1660.0578
SER 1670.0653
SER 1680.0524
GLY 1690.0202
VAL 1710.0069
HIS 1720.0039
THR 1730.0083
PHE 1740.0072
PRO 1750.0079
ALA 1760.0126
VAL 1770.0204
LEU 1780.0186
GLN 1790.0200
SER 1800.0382
ASP 1830.0227
LEU 1840.0162
TYR 1850.0168
THR 1860.0124
LEU 1870.0118
SER 1880.0112
SER 1890.0072
SER 1900.0074
VAL 1910.0096
THR 1920.0224
VAL 1930.0173
PRO 1940.0193
SER 1950.0251
SER 1960.0421
PRO 1980.0261
ARG 1990.0170
PRO 2000.0156
SER 2020.0287
GLU 2030.0182
THR 2040.0213
VAL 2050.0174
THR 2060.0146
CYS 2080.0167
ASN 2090.0201
VAL 2100.0238
ALA 2110.0221
HIS 2120.0152
PRO 2130.0189
ALA 2140.0210
SER 2150.0147
SER 2160.0208
THR 2170.0179
LYS 2180.0233
VAL 2190.0273
ASP 2200.0202
LYS 2210.0205
LYS 2220.0194
ILE 2230.0148
VAL 2260.0119
PRO 2270.0108
ARG 2280.0095
ASP 2320.0076
CYS 2330.0093
SER 20.0134
VAL 30.0084
LEU 40.0090
SER 50.0119
GLN 60.0119
SER 70.0154
PRO 80.0119
ALA 90.0127
ILE 100.0099
LEU 110.0075
SER 120.0100
ALA 130.0109
SER 140.0175
PRO 150.0206
GLY 160.0233
GLU 170.0206
LYS 180.0173
VAL 190.0095
THR 200.0079
MET 210.0095
THR 220.0128
CYS 230.0128
ARG 240.0142
ALA 250.0122
ARG 260.0356
SER 270.0249
SER 290.0200
VAL 300.0152
SER 310.0142
TYR 320.0072
MET 330.0062
HIS 340.0047
TRP 350.0030
TYR 360.0034
GLN 370.0032
GLN 380.0053
LYS 390.0107
SER 400.0178
GLY 410.0303
SER 420.0198
SER 430.0070
PRO 440.0010
LYS 450.0042
PRO 460.0071
TRP 470.0075
ILE 480.0062
HIS 490.0066
ALA 500.0030
THR 510.0024
SER 520.0034
ASN 530.0083
LEU 540.0084
ALA 550.0096
SER 560.0403
GLY 570.0366
VAL 580.0149
PRO 590.0133
ALA 600.0144
ARG 610.0154
PHE 620.0071
SER 630.0077
GLY 640.0077
SER 650.0062
GLY 660.0115
SER 670.0167
GLY 680.0218
THR 690.0196
SER 700.0183
TYR 710.0069
SER 720.0081
LEU 730.0076
THR 740.0132
ILE 750.0116
SER 760.0190
ARG 770.0235
VAL 780.0147
GLU 790.0162
ALA 800.0070
GLU 810.0084
ASP 820.0087
ALA 830.0097
ALA 840.0057
THR 850.0050
TYR 860.0039
TYR 870.0039
CYS 880.0040
GLN 890.0060
GLN 900.0092
TRP 910.0112
SER 920.0190
SER 930.0201
HIS 940.0188
PRO 950.0149
PRO 960.0105
THR 970.0072
PHE 980.0044
GLY 990.0072
SER 1000.0091
GLY 1010.0091
THR 1020.0070
LYS 1030.0074
LEU 1040.0073
GLU 1050.0089
ILE 1060.0088
LYS 1070.0117
ARG 1080.0097
ALA 1090.0123
ASP 1100.0068
ALA 1110.0018
ALA 1120.0040
PRO 1130.0096
THR 1140.0102
VAL 1150.0117
SER 1160.0071
ILE 1170.0068
PHE 1180.0064
PRO 1190.0060
PRO 1200.0049
SER 1210.0038
SER 1220.0098
GLU 1230.0082
GLN 1240.0059
LEU 1250.0029
THR 1260.0029
SER 1270.0028
GLY 1280.0038
GLY 1290.0034
ALA 1300.0028
SER 1310.0039
VAL 1320.0037
VAL 1330.0037
CYS 1340.0055
PHE 1350.0059
LEU 1360.0068
ASN 1370.0082
ASN 1380.0076
PHE 1390.0064
TYR 1400.0051
PRO 1410.0094
LYS 1420.0142
ASP 1430.0146
ILE 1440.0119
ASN 1450.0125
VAL 1460.0109
LYS 1470.0108
TRP 1480.0107
LYS 1490.0138
ILE 1500.0131
ASP 1510.0126
GLY 1520.0143
SER 1530.0149
GLU 1540.0167
ARG 1550.0150
GLN 1560.0130
ASN 1570.0121
GLY 1580.0080
VAL 1590.0094
LEU 1600.0107
ASN 1610.0085
SER 1620.0078
TRP 1630.0077
THR 1640.0128
ASP 1650.0197
GLN 1660.0168
ASP 1670.0293
SER 1680.0310
LYS 1690.0390
ASP 1700.0228
SER 1710.0124
THR 1720.0094
TYR 1730.0106
SER 1740.0087
MET 1750.0085
SER 1760.0046
SER 1770.0058
THR 1780.0061
LEU 1790.0074
THR 1800.0059
LEU 1810.0043
THR 1820.0034
LYS 1830.0039
ASP 1840.0036
GLU 1850.0051
TYR 1860.0054
GLU 1870.0065
ARG 1880.0070
HIS 1890.0088
ASN 1900.0101
SER 1910.0100
TYR 1920.0105
THR 1930.0113
CYS 1940.0125
GLU 1950.0123
ALA 1960.0123
THR 1970.0135
HIS 1980.0106
LYS 1990.0100
THR 2000.0079
SER 2010.0131
THR 2020.0179
SER 2030.0170
PRO 2040.0161
ILE 2050.0157
VAL 2060.0117
LYS 2070.0117
SER 2080.0111
PHE 2090.0077
ASN 2100.0085
ARG 2110.0093
ASN 2120.0080
GLU 2130.0074
CYS 2140.0109

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.