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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0853
ILE 4210.0133
PHE 4220.0139
ILE 4230.0053
SER 4240.0025
ASN 4250.0020
ASP 4260.0044
LYS 4270.0037
GLU 4280.0049
SER 4290.0036
ILE 4300.0037
LYS 4310.0057
CYS 4320.0065
PRO 4330.0078
CYS 4340.0066
GLU 4350.0050
PRO 4360.0030
GLU 4370.0033
ARG 4380.0027
ILE 4390.0029
SER 4400.0024
GLU 4410.0027
SER 4420.0072
THR 4430.0021
CYS 4440.0047
ASN 4450.0028
PHE 4460.0018
TYR 4470.0019
VAL 4480.0017
CYS 4490.0031
ASN 4500.0048
CYS 4510.0083
VAL 4520.0118
GLU 4530.0133
LYS 4540.0219
GLU 10.0364
VAL 20.0195
GLN 30.0162
LEU 40.0071
VAL 50.0077
GLU 60.0079
SER 70.0081
GLY 80.0098
GLY 90.0101
GLY 100.0146
LEU 110.0139
VAL 120.0078
LYS 130.0052
PRO 140.0108
GLY 150.0162
GLY 160.0096
SER 170.0090
LEU 180.0078
LYS 190.0043
LEU 200.0056
SER 210.0081
CYS 220.0074
ALA 230.0058
ALA 240.0047
SER 250.0097
GLY 260.0115
PHE 270.0056
ILE 280.0073
PHE 290.0078
SER 300.0093
ASP 310.0071
TYR 320.0073
TYR 330.0079
MET 340.0072
TYR 350.0068
TRP 360.0066
VAL 370.0049
ARG 380.0037
GLN 390.0035
THR 400.0116
PRO 410.0300
GLU 420.0473
LYS 430.0261
ARG 440.0223
LEU 450.0114
GLU 460.0073
TRP 470.0081
VAL 480.0083
ALA 490.0085
THR 500.0095
ILE 510.0098
SER 520.0110
ASP 520.0100
GLY 530.0094
ASN 540.0107
SER 550.0110
TYR 560.0108
THR 570.0116
TYR 580.0070
TYR 590.0052
VAL 600.0091
ASP 610.0200
SER 620.0205
VAL 630.0117
LYS 640.0158
GLY 650.0186
ARG 660.0149
PHE 670.0037
THR 680.0049
ILE 690.0068
SER 700.0080
ARG 710.0082
ASP 720.0085
ASN 730.0110
ALA 740.0116
LYS 750.0086
ASN 760.0061
ASN 770.0061
LEU 780.0072
TYR 790.0062
LEU 800.0035
GLN 810.0029
MET 820.0067
SER 820.0123
SER 820.0164
LEU 820.0112
LYS 830.0171
SER 840.0194
GLU 850.0189
ASP 860.0123
THR 870.0144
ALA 880.0061
ILE 890.0058
TYR 900.0046
TYR 910.0050
CYS 920.0049
ALA 930.0049
ARG 940.0051
ASP 950.0042
GLY 960.0045
PRO 970.0067
THR 980.0121
ASP 990.0147
SER 1000.0067
SER 1000.0055
GLY 1000.0050
TYR 1000.0046
GLY 1000.0033
GLY 1000.0037
PHE 1000.0031
GLY 1010.0033
TYR 1020.0029
TRP 1030.0047
GLY 1040.0062
GLN 1050.0066
GLY 1060.0071
THR 1070.0087
LEU 1080.0098
VAL 1090.0101
THR 1100.0125
VAL 1110.0087
SER 1120.0128
GLU 1130.0093
ALA 1140.0156
LYS 1150.0196
THR 1160.0188
THR 1170.0126
PRO 1180.0080
PRO 1190.0064
SER 1200.0060
VAL 1210.0143
TYR 1220.0147
PRO 1230.0163
LEU 1240.0128
ALA 1250.0108
PRO 1260.0093
GLY 1270.0108
SER 1280.0119
ALA 1290.0300
ALA 1300.0155
GLN 1330.0178
THR 1340.0165
ASN 1350.0159
SER 1360.0193
MET 1370.0122
VAL 1380.0086
THR 1390.0097
LEU 1400.0097
GLY 1410.0109
CYS 1420.0105
LEU 1430.0104
VAL 1440.0082
LYS 1450.0054
GLY 1460.0027
TYR 1470.0066
PHE 1480.0133
PRO 1490.0159
GLU 1500.0167
PRO 1510.0187
VAL 1520.0136
THR 1530.0177
VAL 1540.0157
THR 1560.0175
TRP 1570.0044
ASN 1620.0122
SER 1630.0145
GLY 1640.0374
SER 1650.0630
LEU 1660.0490
SER 1670.0653
SER 1680.0604
GLY 1690.0206
VAL 1710.0143
HIS 1720.0146
THR 1730.0158
PHE 1740.0125
PRO 1750.0160
ALA 1760.0153
VAL 1770.0129
LEU 1780.0096
GLN 1790.0081
SER 1800.0095
ASP 1830.0077
LEU 1840.0060
TYR 1850.0084
THR 1860.0080
LEU 1870.0075
SER 1880.0064
SER 1890.0054
SER 1900.0022
VAL 1910.0058
THR 1920.0156
VAL 1930.0116
PRO 1940.0119
SER 1950.0166
SER 1960.0298
PRO 1980.0240
ARG 1990.0171
PRO 2000.0143
SER 2020.0175
GLU 2030.0253
THR 2040.0273
VAL 2050.0214
THR 2060.0192
CYS 2080.0174
ASN 2090.0185
VAL 2100.0207
ALA 2110.0220
HIS 2120.0167
PRO 2130.0189
ALA 2140.0231
SER 2150.0154
SER 2160.0148
THR 2170.0159
LYS 2180.0213
VAL 2190.0236
ASP 2200.0233
LYS 2210.0242
LYS 2220.0224
ILE 2230.0184
VAL 2260.0182
PRO 2270.0143
ARG 2280.0098
ASP 2320.0315
CYS 2330.0394
SER 20.0101
VAL 30.0067
LEU 40.0013
SER 50.0073
GLN 60.0089
SER 70.0105
PRO 80.0134
ALA 90.0124
ILE 100.0095
LEU 110.0065
SER 120.0042
ALA 130.0059
SER 140.0088
PRO 150.0132
GLY 160.0184
GLU 170.0152
LYS 180.0172
VAL 190.0157
THR 200.0113
MET 210.0120
THR 220.0130
CYS 230.0072
ARG 240.0048
ALA 250.0050
ARG 260.0244
SER 270.0124
SER 290.0072
VAL 300.0043
SER 310.0034
TYR 320.0041
MET 330.0046
HIS 340.0050
TRP 350.0069
TYR 360.0077
GLN 370.0082
GLN 380.0066
LYS 390.0033
SER 400.0068
GLY 410.0070
SER 420.0052
SER 430.0049
PRO 440.0071
LYS 450.0086
PRO 460.0109
TRP 470.0148
ILE 480.0100
HIS 490.0088
ALA 500.0063
THR 510.0063
SER 520.0084
ASN 530.0138
LEU 540.0154
ALA 550.0185
SER 560.0853
GLY 570.0722
VAL 580.0293
PRO 590.0140
ALA 600.0113
ARG 610.0109
PHE 620.0098
SER 630.0096
GLY 640.0111
SER 650.0071
GLY 660.0057
SER 670.0055
GLY 680.0082
THR 690.0073
SER 700.0076
TYR 710.0068
SER 720.0087
LEU 730.0100
THR 740.0169
ILE 750.0141
SER 760.0159
ARG 770.0199
VAL 780.0131
GLU 790.0105
ALA 800.0085
GLU 810.0093
ASP 820.0076
ALA 830.0069
ALA 840.0032
THR 850.0067
TYR 860.0075
TYR 870.0073
CYS 880.0070
GLN 890.0027
GLN 900.0031
TRP 910.0031
SER 920.0055
SER 930.0072
HIS 940.0078
PRO 950.0072
PRO 960.0050
THR 970.0043
PHE 980.0056
GLY 990.0081
SER 1000.0093
GLY 1010.0097
THR 1020.0083
LYS 1030.0070
LEU 1040.0076
GLU 1050.0062
ILE 1060.0048
LYS 1070.0053
ARG 1080.0056
ALA 1090.0100
ASP 1100.0232
ALA 1110.0157
ALA 1120.0154
PRO 1130.0065
THR 1140.0036
VAL 1150.0081
SER 1160.0148
ILE 1170.0153
PHE 1180.0147
PRO 1190.0148
PRO 1200.0140
SER 1210.0158
SER 1220.0196
GLU 1230.0156
GLN 1240.0134
LEU 1250.0137
THR 1260.0180
SER 1270.0138
GLY 1280.0113
GLY 1290.0096
ALA 1300.0104
SER 1310.0107
VAL 1320.0109
VAL 1330.0119
CYS 1340.0070
PHE 1350.0046
LEU 1360.0029
ASN 1370.0058
ASN 1380.0066
PHE 1390.0101
TYR 1400.0170
PRO 1410.0260
LYS 1420.0306
ASP 1430.0341
ILE 1440.0158
ASN 1450.0114
VAL 1460.0110
LYS 1470.0107
TRP 1480.0112
LYS 1490.0163
ILE 1500.0148
ASP 1510.0203
GLY 1520.0355
SER 1530.0375
GLU 1540.0296
ARG 1550.0106
GLN 1560.0038
ASN 1570.0049
GLY 1580.0076
VAL 1590.0072
LEU 1600.0085
ASN 1610.0129
SER 1620.0154
TRP 1630.0179
THR 1640.0238
ASP 1650.0250
GLN 1660.0233
ASP 1670.0352
SER 1680.0385
LYS 1690.0439
ASP 1700.0211
SER 1710.0122
THR 1720.0122
TYR 1730.0186
SER 1740.0139
MET 1750.0121
SER 1760.0057
SER 1770.0061
THR 1780.0074
LEU 1790.0097
THR 1800.0087
LEU 1810.0077
THR 1820.0073
LYS 1830.0088
ASP 1840.0087
GLU 1850.0078
TYR 1860.0080
GLU 1870.0062
ARG 1880.0127
HIS 1890.0156
ASN 1900.0173
SER 1910.0209
TYR 1920.0197
THR 1930.0224
CYS 1940.0171
GLU 1950.0145
ALA 1960.0118
THR 1970.0059
HIS 1980.0099
LYS 1990.0236
THR 2000.0310
SER 2010.0387
THR 2020.0613
SER 2030.0385
PRO 2040.0241
ILE 2050.0095
VAL 2060.0140
LYS 2070.0171
SER 2080.0207
PHE 2090.0216
ASN 2100.0180
ARG 2110.0122
ASN 2120.0174
GLU 2130.0194
CYS 2140.0221

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.