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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 51  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0867
ILE 4210.0111
PHE 4220.0052
ILE 4230.0120
SER 4240.0152
ASN 4250.0184
ASP 4260.0218
LYS 4270.0152
GLU 4280.0136
SER 4290.0129
ILE 4300.0082
LYS 4310.0063
CYS 4320.0057
PRO 4330.0045
CYS 4340.0035
GLU 4350.0032
PRO 4360.0110
GLU 4370.0134
ARG 4380.0157
ILE 4390.0217
SER 4400.0105
GLU 4410.0144
SER 4420.0339
THR 4430.0137
CYS 4440.0153
ASN 4450.0170
PHE 4460.0154
TYR 4470.0172
VAL 4480.0108
CYS 4490.0071
ASN 4500.0101
CYS 4510.0079
VAL 4520.0136
GLU 4530.0151
LYS 4540.0357
GLU 10.0867
VAL 20.0520
GLN 30.0481
LEU 40.0111
VAL 50.0147
GLU 60.0199
SER 70.0194
GLY 80.0265
GLY 90.0301
GLY 100.0389
LEU 110.0276
VAL 120.0273
LYS 130.0352
PRO 140.0279
GLY 150.0356
GLY 160.0262
SER 170.0297
LEU 180.0326
LYS 190.0168
LEU 200.0163
SER 210.0171
CYS 220.0089
ALA 230.0138
ALA 240.0139
SER 250.0280
GLY 260.0322
PHE 270.0217
ILE 280.0117
PHE 290.0048
SER 300.0082
ASP 310.0067
TYR 320.0035
TYR 330.0012
MET 340.0044
TYR 350.0062
TRP 360.0087
VAL 370.0126
ARG 380.0141
GLN 390.0137
THR 400.0207
PRO 410.0332
GLU 420.0628
LYS 430.0287
ARG 440.0284
LEU 450.0185
GLU 460.0126
TRP 470.0106
VAL 480.0101
ALA 490.0073
THR 500.0075
ILE 510.0076
SER 520.0063
ASP 520.0052
GLY 530.0052
ASN 540.0064
SER 550.0065
TYR 560.0058
THR 570.0061
TYR 580.0064
TYR 590.0061
VAL 600.0105
ASP 610.0383
SER 620.0314
VAL 630.0154
LYS 640.0292
GLY 650.0337
ARG 660.0242
PHE 670.0118
THR 680.0140
ILE 690.0141
SER 700.0105
ARG 710.0094
ASP 720.0181
ASN 730.0236
ALA 740.0347
LYS 750.0335
ASN 760.0152
ASN 770.0101
LEU 780.0052
TYR 790.0118
LEU 800.0123
GLN 810.0131
MET 820.0240
SER 820.0272
SER 820.0262
LEU 820.0153
LYS 830.0134
SER 840.0147
GLU 850.0185
ASP 860.0141
THR 870.0220
ALA 880.0213
ILE 890.0207
TYR 900.0177
TYR 910.0125
CYS 920.0103
ALA 930.0057
ARG 940.0073
ASP 950.0074
GLY 960.0105
PRO 970.0191
THR 980.0206
ASP 990.0224
SER 1000.0132
SER 1000.0120
GLY 1000.0115
TYR 1000.0095
GLY 1000.0046
GLY 1000.0030
PHE 1000.0038
GLY 1010.0072
TYR 1020.0105
TRP 1030.0073
GLY 1040.0094
GLN 1050.0113
GLY 1060.0214
THR 1070.0247
LEU 1080.0284
VAL 1090.0287
THR 1100.0228
VAL 1110.0130
SER 1120.0110
GLU 1130.0279
ALA 1140.0105
LYS 1150.0097
THR 1160.0063
THR 1170.0064
PRO 1180.0077
PRO 1190.0025
SER 1200.0018
VAL 1210.0093
TYR 1220.0099
PRO 1230.0112
LEU 1240.0045
ALA 1250.0074
PRO 1260.0093
GLY 1270.0049
SER 1280.0155
ALA 1290.0509
ALA 1300.0239
GLN 1330.0265
THR 1340.0131
ASN 1350.0193
SER 1360.0271
MET 1370.0195
VAL 1380.0076
THR 1390.0086
LEU 1400.0072
GLY 1410.0075
CYS 1420.0075
LEU 1430.0059
VAL 1440.0047
LYS 1450.0017
GLY 1460.0014
TYR 1470.0018
PHE 1480.0043
PRO 1490.0056
GLU 1500.0067
PRO 1510.0061
VAL 1520.0089
THR 1530.0135
VAL 1540.0094
THR 1560.0108
TRP 1570.0075
ASN 1620.0116
SER 1630.0218
GLY 1640.0235
SER 1650.0257
LEU 1660.0171
SER 1670.0209
SER 1680.0207
GLY 1690.0137
VAL 1710.0048
HIS 1720.0070
THR 1730.0063
PHE 1740.0069
PRO 1750.0061
ALA 1760.0059
VAL 1770.0077
LEU 1780.0072
GLN 1790.0084
SER 1800.0057
ASP 1830.0023
LEU 1840.0024
TYR 1850.0043
THR 1860.0038
LEU 1870.0040
SER 1880.0039
SER 1890.0067
SER 1900.0078
VAL 1910.0072
THR 1920.0131
VAL 1930.0100
PRO 1940.0103
SER 1950.0133
SER 1960.0101
PRO 1980.0054
ARG 1990.0061
PRO 2000.0053
SER 2020.0138
GLU 2030.0113
THR 2040.0084
VAL 2050.0069
THR 2060.0118
CYS 2080.0139
ASN 2090.0138
VAL 2100.0141
ALA 2110.0137
HIS 2120.0103
PRO 2130.0177
ALA 2140.0117
SER 2150.0150
SER 2160.0230
THR 2170.0129
LYS 2180.0147
VAL 2190.0103
ASP 2200.0146
LYS 2210.0140
LYS 2220.0128
ILE 2230.0103
VAL 2260.0138
PRO 2270.0150
ARG 2280.0134
ASP 2320.0092
CYS 2330.0147
SER 20.0084
VAL 30.0065
LEU 40.0052
SER 50.0076
GLN 60.0073
SER 70.0073
PRO 80.0080
ALA 90.0052
ILE 100.0038
LEU 110.0059
SER 120.0100
ALA 130.0114
SER 140.0137
PRO 150.0111
GLY 160.0096
GLU 170.0099
LYS 180.0076
VAL 190.0063
THR 200.0069
MET 210.0072
THR 220.0076
CYS 230.0072
ARG 240.0074
ALA 250.0078
ARG 260.0103
SER 270.0161
SER 290.0121
VAL 300.0088
SER 310.0097
TYR 320.0056
MET 330.0050
HIS 340.0043
TRP 350.0074
TYR 360.0075
GLN 370.0083
GLN 380.0109
LYS 390.0174
SER 400.0273
GLY 410.0490
SER 420.0300
SER 430.0104
PRO 440.0079
LYS 450.0086
PRO 460.0113
TRP 470.0105
ILE 480.0062
HIS 490.0045
ALA 500.0056
THR 510.0066
SER 520.0060
ASN 530.0083
LEU 540.0086
ALA 550.0131
SER 560.0778
GLY 570.0600
VAL 580.0192
PRO 590.0099
ALA 600.0106
ARG 610.0057
PHE 620.0070
SER 630.0069
GLY 640.0067
SER 650.0122
GLY 660.0121
SER 670.0132
GLY 680.0151
THR 690.0125
SER 700.0118
TYR 710.0086
SER 720.0092
LEU 730.0096
THR 740.0061
ILE 750.0047
SER 760.0035
ARG 770.0033
VAL 780.0040
GLU 790.0045
ALA 800.0068
GLU 810.0056
ASP 820.0049
ALA 830.0073
ALA 840.0047
THR 850.0057
TYR 860.0075
TYR 870.0065
CYS 880.0069
GLN 890.0057
GLN 900.0042
TRP 910.0029
SER 920.0037
SER 930.0067
HIS 940.0077
PRO 950.0068
PRO 960.0058
THR 970.0063
PHE 980.0096
GLY 990.0090
SER 1000.0089
GLY 1010.0067
THR 1020.0056
LYS 1030.0035
LEU 1040.0047
GLU 1050.0083
ILE 1060.0105
LYS 1070.0112
ARG 1080.0128
ALA 1090.0145
ASP 1100.0129
ALA 1110.0118
ALA 1120.0129
PRO 1130.0100
THR 1140.0092
VAL 1150.0093
SER 1160.0039
ILE 1170.0042
PHE 1180.0041
PRO 1190.0038
PRO 1200.0055
SER 1210.0072
SER 1220.0113
GLU 1230.0119
GLN 1240.0120
LEU 1250.0138
THR 1260.0192
SER 1270.0204
GLY 1280.0167
GLY 1290.0138
ALA 1300.0103
SER 1310.0046
VAL 1320.0042
VAL 1330.0052
CYS 1340.0064
PHE 1350.0060
LEU 1360.0063
ASN 1370.0100
ASN 1380.0099
PHE 1390.0102
TYR 1400.0125
PRO 1410.0134
LYS 1420.0137
ASP 1430.0122
ILE 1440.0088
ASN 1450.0131
VAL 1460.0097
LYS 1470.0089
TRP 1480.0083
LYS 1490.0110
ILE 1500.0092
ASP 1510.0102
GLY 1520.0172
SER 1530.0192
GLU 1540.0146
ARG 1550.0108
GLN 1560.0101
ASN 1570.0106
GLY 1580.0075
VAL 1590.0055
LEU 1600.0032
ASN 1610.0046
SER 1620.0054
TRP 1630.0050
THR 1640.0099
ASP 1650.0145
GLN 1660.0124
ASP 1670.0130
SER 1680.0141
LYS 1690.0139
ASP 1700.0127
SER 1710.0107
THR 1720.0104
TYR 1730.0088
SER 1740.0084
MET 1750.0080
SER 1760.0034
SER 1770.0040
THR 1780.0049
LEU 1790.0079
THR 1800.0078
LEU 1810.0063
THR 1820.0124
LYS 1830.0151
ASP 1840.0146
GLU 1850.0109
TYR 1860.0101
GLU 1870.0101
ARG 1880.0096
HIS 1890.0077
ASN 1900.0095
SER 1910.0100
TYR 1920.0104
THR 1930.0123
CYS 1940.0119
GLU 1950.0125
ALA 1960.0132
THR 1970.0148
HIS 1980.0103
LYS 1990.0091
THR 2000.0058
SER 2010.0123
THR 2020.0320
SER 2030.0196
PRO 2040.0175
ILE 2050.0099
VAL 2060.0098
LYS 2070.0091
SER 2080.0094
PHE 2090.0101
ASN 2100.0106
ARG 2110.0102
ASN 2120.0147
GLU 2130.0069
CYS 2140.0059

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.