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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0976
ILE 4210.0104
PHE 4220.0099
ILE 4230.0061
SER 4240.0043
ASN 4250.0037
ASP 4260.0027
LYS 4270.0030
GLU 4280.0032
SER 4290.0027
ILE 4300.0038
LYS 4310.0068
CYS 4320.0071
PRO 4330.0076
CYS 4340.0061
GLU 4350.0039
PRO 4360.0052
GLU 4370.0061
ARG 4380.0062
ILE 4390.0071
SER 4400.0048
GLU 4410.0065
SER 4420.0221
THR 4430.0026
CYS 4440.0167
ASN 4450.0073
PHE 4460.0057
TYR 4470.0051
VAL 4480.0042
CYS 4490.0061
ASN 4500.0095
CYS 4510.0120
VAL 4520.0142
GLU 4530.0148
LYS 4540.0259
GLU 10.0405
VAL 20.0137
GLN 30.0213
LEU 40.0071
VAL 50.0033
GLU 60.0045
SER 70.0081
GLY 80.0105
GLY 90.0068
GLY 100.0052
LEU 110.0053
VAL 120.0016
LYS 130.0069
PRO 140.0071
GLY 150.0132
GLY 160.0163
SER 170.0177
LEU 180.0157
LYS 190.0119
LEU 200.0081
SER 210.0067
CYS 220.0046
ALA 230.0079
ALA 240.0105
SER 250.0099
GLY 260.0108
PHE 270.0097
ILE 280.0150
PHE 290.0126
SER 300.0102
ASP 310.0101
TYR 320.0056
TYR 330.0015
MET 340.0010
TYR 350.0020
TRP 360.0032
VAL 370.0030
ARG 380.0035
GLN 390.0033
THR 400.0021
PRO 410.0034
GLU 420.0060
LYS 430.0045
ARG 440.0040
LEU 450.0034
GLU 460.0041
TRP 470.0040
VAL 480.0042
ALA 490.0063
THR 500.0049
ILE 510.0041
SER 520.0057
ASP 520.0068
GLY 530.0114
ASN 540.0149
SER 550.0110
TYR 560.0107
THR 570.0103
TYR 580.0075
TYR 590.0073
VAL 600.0085
ASP 610.0141
SER 620.0155
VAL 630.0136
LYS 640.0153
GLY 650.0178
ARG 660.0172
PHE 670.0109
THR 680.0084
ILE 690.0054
SER 700.0093
ARG 710.0088
ASP 720.0145
ASN 730.0187
ALA 740.0290
LYS 750.0283
ASN 760.0145
ASN 770.0101
LEU 780.0054
TYR 790.0064
LEU 800.0081
GLN 810.0101
MET 820.0156
SER 820.0185
SER 820.0182
LEU 820.0116
LYS 830.0101
SER 840.0066
GLU 850.0077
ASP 860.0050
THR 870.0015
ALA 880.0029
ILE 890.0038
TYR 900.0035
TYR 910.0029
CYS 920.0015
ALA 930.0015
ARG 940.0038
ASP 950.0045
GLY 960.0068
PRO 970.0082
THR 980.0071
ASP 990.0060
SER 1000.0058
SER 1000.0059
GLY 1000.0068
TYR 1000.0075
GLY 1000.0077
GLY 1000.0067
PHE 1000.0060
GLY 1010.0055
TYR 1020.0056
TRP 1030.0044
GLY 1040.0039
GLN 1050.0055
GLY 1060.0044
THR 1070.0052
LEU 1080.0051
VAL 1090.0035
THR 1100.0032
VAL 1110.0023
SER 1120.0109
GLU 1130.0195
ALA 1140.0160
LYS 1150.0176
THR 1160.0171
THR 1170.0197
PRO 1180.0209
PRO 1190.0216
SER 1200.0288
VAL 1210.0220
TYR 1220.0178
PRO 1230.0146
LEU 1240.0117
ALA 1250.0174
PRO 1260.0251
GLY 1270.0263
SER 1280.0538
ALA 1290.0976
ALA 1300.0373
GLN 1330.0209
THR 1340.0316
ASN 1350.0570
SER 1360.0301
MET 1370.0269
VAL 1380.0241
THR 1390.0136
LEU 1400.0114
GLY 1410.0086
CYS 1420.0108
LEU 1430.0159
VAL 1440.0182
LYS 1450.0238
GLY 1460.0193
TYR 1470.0150
PHE 1480.0073
PRO 1490.0039
GLU 1500.0046
PRO 1510.0046
VAL 1520.0091
THR 1530.0091
VAL 1540.0076
THR 1560.0047
TRP 1570.0034
ASN 1620.0046
SER 1630.0034
GLY 1640.0070
SER 1650.0124
LEU 1660.0104
SER 1670.0131
SER 1680.0145
GLY 1690.0067
VAL 1710.0027
HIS 1720.0046
THR 1730.0080
PHE 1740.0125
PRO 1750.0136
ALA 1760.0157
VAL 1770.0196
LEU 1780.0115
GLN 1790.0065
SER 1800.0354
ASP 1830.0148
LEU 1840.0093
TYR 1850.0109
THR 1860.0173
LEU 1870.0143
SER 1880.0124
SER 1890.0065
SER 1900.0033
VAL 1910.0056
THR 1920.0198
VAL 1930.0175
PRO 1940.0158
SER 1950.0137
SER 1960.0212
PRO 1980.0227
ARG 1990.0212
PRO 2000.0326
SER 2020.0571
GLU 2030.0441
THR 2040.0249
VAL 2050.0092
THR 2060.0069
CYS 2080.0061
ASN 2090.0053
VAL 2100.0092
ALA 2110.0129
HIS 2120.0130
PRO 2130.0141
ALA 2140.0159
SER 2150.0227
SER 2160.0260
THR 2170.0199
LYS 2180.0151
VAL 2190.0160
ASP 2200.0061
LYS 2210.0066
LYS 2220.0090
ILE 2230.0166
VAL 2260.0280
PRO 2270.0346
ARG 2280.0298
ASP 2320.0541
CYS 2330.0583
SER 20.0076
VAL 30.0100
LEU 40.0059
SER 50.0046
GLN 60.0015
SER 70.0015
PRO 80.0046
ALA 90.0056
ILE 100.0063
LEU 110.0090
SER 120.0098
ALA 130.0100
SER 140.0136
PRO 150.0092
GLY 160.0040
GLU 170.0040
LYS 180.0065
VAL 190.0082
THR 200.0041
MET 210.0037
THR 220.0043
CYS 230.0049
ARG 240.0083
ALA 250.0089
ARG 260.0207
SER 270.0155
SER 290.0136
VAL 300.0103
SER 310.0134
TYR 320.0092
MET 330.0085
HIS 340.0089
TRP 350.0065
TYR 360.0057
GLN 370.0043
GLN 380.0038
LYS 390.0038
SER 400.0037
GLY 410.0119
SER 420.0102
SER 430.0062
PRO 440.0050
LYS 450.0061
PRO 460.0060
TRP 470.0051
ILE 480.0064
HIS 490.0078
ALA 500.0099
THR 510.0091
SER 520.0079
ASN 530.0075
LEU 540.0047
ALA 550.0033
SER 560.0316
GLY 570.0303
VAL 580.0102
PRO 590.0120
ALA 600.0145
ARG 610.0106
PHE 620.0050
SER 630.0058
GLY 640.0072
SER 650.0076
GLY 660.0112
SER 670.0180
GLY 680.0183
THR 690.0147
SER 700.0134
TYR 710.0075
SER 720.0057
LEU 730.0050
THR 740.0067
ILE 750.0048
SER 760.0083
ARG 770.0041
VAL 780.0030
GLU 790.0083
ALA 800.0090
GLU 810.0092
ASP 820.0067
ALA 830.0065
ALA 840.0045
THR 850.0043
TYR 860.0039
TYR 870.0049
CYS 880.0057
GLN 890.0079
GLN 900.0072
TRP 910.0068
SER 920.0089
SER 930.0088
HIS 940.0087
PRO 950.0054
PRO 960.0061
THR 970.0074
PHE 980.0049
GLY 990.0035
SER 1000.0030
GLY 1010.0044
THR 1020.0033
LYS 1030.0040
LEU 1040.0078
GLU 1050.0081
ILE 1060.0090
LYS 1070.0141
ARG 1080.0151
ALA 1090.0166
ASP 1100.0156
ALA 1110.0170
ALA 1120.0212
PRO 1130.0211
THR 1140.0188
VAL 1150.0172
SER 1160.0046
ILE 1170.0038
PHE 1180.0117
PRO 1190.0155
PRO 1200.0154
SER 1210.0148
SER 1220.0103
GLU 1230.0185
GLN 1240.0234
LEU 1250.0210
THR 1260.0311
SER 1270.0402
GLY 1280.0334
GLY 1290.0289
ALA 1300.0210
SER 1310.0118
VAL 1320.0121
VAL 1330.0117
CYS 1340.0066
PHE 1350.0087
LEU 1360.0150
ASN 1370.0140
ASN 1380.0104
PHE 1390.0114
TYR 1400.0066
PRO 1410.0026
LYS 1420.0072
ASP 1430.0120
ILE 1440.0196
ASN 1450.0307
VAL 1460.0237
LYS 1470.0153
TRP 1480.0041
LYS 1490.0063
ILE 1500.0066
ASP 1510.0075
GLY 1520.0249
SER 1530.0223
GLU 1540.0224
ARG 1550.0137
GLN 1560.0124
ASN 1570.0169
GLY 1580.0111
VAL 1590.0120
LEU 1600.0143
ASN 1610.0157
SER 1620.0148
TRP 1630.0162
THR 1640.0091
ASP 1650.0079
GLN 1660.0053
ASP 1670.0039
SER 1680.0071
LYS 1690.0083
ASP 1700.0080
SER 1710.0056
THR 1720.0025
TYR 1730.0064
SER 1740.0108
MET 1750.0150
SER 1760.0134
SER 1770.0118
THR 1780.0087
LEU 1790.0152
THR 1800.0160
LEU 1810.0149
THR 1820.0268
LYS 1830.0255
ASP 1840.0248
GLU 1850.0200
TYR 1860.0155
GLU 1870.0121
ARG 1880.0147
HIS 1890.0088
ASN 1900.0063
SER 1910.0086
TYR 1920.0076
THR 1930.0063
CYS 1940.0122
GLU 1950.0212
ALA 1960.0294
THR 1970.0295
HIS 1980.0169
LYS 1990.0151
THR 2000.0275
SER 2010.0461
THR 2020.0606
SER 2030.0411
PRO 2040.0392
ILE 2050.0376
VAL 2060.0168
LYS 2070.0061
SER 2080.0054
PHE 2090.0163
ASN 2100.0122
ARG 2110.0119
ASN 2120.0369
GLU 2130.0377
CYS 2140.0510

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.