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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0685
ILE 4210.0146
PHE 4220.0140
ILE 4230.0120
SER 4240.0128
ASN 4250.0146
ASP 4260.0162
LYS 4270.0115
GLU 4280.0107
SER 4290.0110
ILE 4300.0084
LYS 4310.0093
CYS 4320.0094
PRO 4330.0073
CYS 4340.0052
GLU 4350.0044
PRO 4360.0095
GLU 4370.0093
ARG 4380.0104
ILE 4390.0124
SER 4400.0082
GLU 4410.0047
SER 4420.0204
THR 4430.0083
CYS 4440.0184
ASN 4450.0144
PHE 4460.0142
TYR 4470.0147
VAL 4480.0077
CYS 4490.0100
ASN 4500.0110
CYS 4510.0125
VAL 4520.0182
GLU 4530.0207
LYS 4540.0474
GLU 10.0255
VAL 20.0104
GLN 30.0116
LEU 40.0037
VAL 50.0022
GLU 60.0033
SER 70.0078
GLY 80.0101
GLY 90.0114
GLY 100.0140
LEU 110.0123
VAL 120.0116
LYS 130.0133
PRO 140.0112
GLY 150.0114
GLY 160.0151
SER 170.0144
LEU 180.0135
LYS 190.0083
LEU 200.0060
SER 210.0054
CYS 220.0014
ALA 230.0032
ALA 240.0045
SER 250.0065
GLY 260.0082
PHE 270.0072
ILE 280.0060
PHE 290.0053
SER 300.0043
ASP 310.0052
TYR 320.0041
TYR 330.0035
MET 340.0023
TYR 350.0025
TRP 360.0027
VAL 370.0069
ARG 380.0068
GLN 390.0080
THR 400.0081
PRO 410.0131
GLU 420.0182
LYS 430.0115
ARG 440.0082
LEU 450.0074
GLU 460.0059
TRP 470.0064
VAL 480.0059
ALA 490.0046
THR 500.0039
ILE 510.0036
SER 520.0056
ASP 520.0062
GLY 530.0068
ASN 540.0077
SER 550.0068
TYR 560.0065
THR 570.0063
TYR 580.0034
TYR 590.0048
VAL 600.0092
ASP 610.0223
SER 620.0165
VAL 630.0096
LYS 640.0176
GLY 650.0205
ARG 660.0148
PHE 670.0058
THR 680.0052
ILE 690.0018
SER 700.0042
ARG 710.0039
ASP 720.0045
ASN 730.0059
ALA 740.0086
LYS 750.0077
ASN 760.0045
ASN 770.0030
LEU 780.0017
TYR 790.0025
LEU 800.0031
GLN 810.0065
MET 820.0094
SER 820.0134
SER 820.0139
LEU 820.0096
LYS 830.0061
SER 840.0073
GLU 850.0056
ASP 860.0058
THR 870.0094
ALA 880.0097
ILE 890.0093
TYR 900.0069
TYR 910.0043
CYS 920.0035
ALA 930.0050
ARG 940.0023
ASP 950.0020
GLY 960.0038
PRO 970.0098
THR 980.0153
ASP 990.0205
SER 1000.0071
SER 1000.0059
GLY 1000.0080
TYR 1000.0087
GLY 1000.0073
GLY 1000.0042
PHE 1000.0029
GLY 1010.0029
TYR 1020.0053
TRP 1030.0055
GLY 1040.0040
GLN 1050.0055
GLY 1060.0089
THR 1070.0091
LEU 1080.0111
VAL 1090.0110
THR 1100.0109
VAL 1110.0091
SER 1120.0090
GLU 1130.0089
ALA 1140.0085
LYS 1150.0061
THR 1160.0068
THR 1170.0078
PRO 1180.0026
PRO 1190.0075
SER 1200.0125
VAL 1210.0193
TYR 1220.0206
PRO 1230.0236
LEU 1240.0148
ALA 1250.0170
PRO 1260.0189
GLY 1270.0270
SER 1280.0218
ALA 1290.0342
ALA 1300.0330
GLN 1330.0551
THR 1340.0400
ASN 1350.0322
SER 1360.0247
MET 1370.0233
VAL 1380.0250
THR 1390.0114
LEU 1400.0126
GLY 1410.0163
CYS 1420.0152
LEU 1430.0157
VAL 1440.0138
LYS 1450.0136
GLY 1460.0117
TYR 1470.0111
PHE 1480.0091
PRO 1490.0081
GLU 1500.0102
PRO 1510.0177
VAL 1520.0147
THR 1530.0157
VAL 1540.0147
THR 1560.0162
TRP 1570.0140
ASN 1620.0282
SER 1630.0249
GLY 1640.0110
SER 1650.0318
LEU 1660.0256
SER 1670.0362
SER 1680.0494
GLY 1690.0209
VAL 1710.0099
HIS 1720.0135
THR 1730.0193
PHE 1740.0177
PRO 1750.0180
ALA 1760.0193
VAL 1770.0176
LEU 1780.0090
GLN 1790.0182
SER 1800.0660
ASP 1830.0141
LEU 1840.0147
TYR 1850.0154
THR 1860.0183
LEU 1870.0187
SER 1880.0192
SER 1890.0161
SER 1900.0123
VAL 1910.0091
THR 1920.0182
VAL 1930.0168
PRO 1940.0172
SER 1950.0151
SER 1960.0127
PRO 1980.0172
ARG 1990.0112
PRO 2000.0174
SER 2020.0332
GLU 2030.0435
THR 2040.0377
VAL 2050.0294
THR 2060.0323
CYS 2080.0248
ASN 2090.0197
VAL 2100.0192
ALA 2110.0114
HIS 2120.0117
PRO 2130.0139
ALA 2140.0126
SER 2150.0100
SER 2160.0140
THR 2170.0155
LYS 2180.0167
VAL 2190.0231
ASP 2200.0291
LYS 2210.0291
LYS 2220.0280
ILE 2230.0228
VAL 2260.0160
PRO 2270.0162
ARG 2280.0209
ASP 2320.0176
CYS 2330.0151
SER 20.0039
VAL 30.0075
LEU 40.0066
SER 50.0095
GLN 60.0074
SER 70.0088
PRO 80.0113
ALA 90.0120
ILE 100.0099
LEU 110.0066
SER 120.0063
ALA 130.0071
SER 140.0099
PRO 150.0110
GLY 160.0141
GLU 170.0123
LYS 180.0111
VAL 190.0115
THR 200.0053
MET 210.0055
THR 220.0062
CYS 230.0041
ARG 240.0085
ALA 250.0072
ARG 260.0156
SER 270.0165
SER 290.0115
VAL 300.0078
SER 310.0102
TYR 320.0070
MET 330.0057
HIS 340.0063
TRP 350.0063
TYR 360.0069
GLN 370.0066
GLN 380.0096
LYS 390.0108
SER 400.0106
GLY 410.0213
SER 420.0165
SER 430.0095
PRO 440.0077
LYS 450.0085
PRO 460.0075
TRP 470.0023
ILE 480.0057
HIS 490.0071
ALA 500.0067
THR 510.0078
SER 520.0077
ASN 530.0127
LEU 540.0114
ALA 550.0089
SER 560.0582
GLY 570.0458
VAL 580.0132
PRO 590.0082
ALA 600.0113
ARG 610.0089
PHE 620.0068
SER 630.0070
GLY 640.0057
SER 650.0028
GLY 660.0051
SER 670.0119
GLY 680.0144
THR 690.0119
SER 700.0099
TYR 710.0014
SER 720.0013
LEU 730.0038
THR 740.0086
ILE 750.0069
SER 760.0074
ARG 770.0103
VAL 780.0074
GLU 790.0054
ALA 800.0049
GLU 810.0053
ASP 820.0046
ALA 830.0078
ALA 840.0067
THR 850.0082
TYR 860.0066
TYR 870.0075
CYS 880.0066
GLN 890.0058
GLN 900.0050
TRP 910.0046
SER 920.0078
SER 930.0090
HIS 940.0098
PRO 950.0058
PRO 960.0055
THR 970.0046
PHE 980.0067
GLY 990.0062
SER 1000.0081
GLY 1010.0092
THR 1020.0072
LYS 1030.0054
LEU 1040.0037
GLU 1050.0037
ILE 1060.0044
LYS 1070.0023
ARG 1080.0050
ALA 1090.0088
ASP 1100.0133
ALA 1110.0103
ALA 1120.0116
PRO 1130.0050
THR 1140.0067
VAL 1150.0096
SER 1160.0052
ILE 1170.0052
PHE 1180.0054
PRO 1190.0129
PRO 1200.0135
SER 1210.0134
SER 1220.0273
GLU 1230.0198
GLN 1240.0152
LEU 1250.0245
THR 1260.0369
SER 1270.0337
GLY 1280.0196
GLY 1290.0108
ALA 1300.0074
SER 1310.0042
VAL 1320.0055
VAL 1330.0052
CYS 1340.0087
PHE 1350.0083
LEU 1360.0066
ASN 1370.0056
ASN 1380.0047
PHE 1390.0033
TYR 1400.0066
PRO 1410.0110
LYS 1420.0107
ASP 1430.0108
ILE 1440.0059
ASN 1450.0159
VAL 1460.0145
LYS 1470.0147
TRP 1480.0145
LYS 1490.0128
ILE 1500.0109
ASP 1510.0095
GLY 1520.0124
SER 1530.0142
GLU 1540.0147
ARG 1550.0132
GLN 1560.0132
ASN 1570.0137
GLY 1580.0140
VAL 1590.0135
LEU 1600.0134
ASN 1610.0123
SER 1620.0128
TRP 1630.0112
THR 1640.0122
ASP 1650.0139
GLN 1660.0138
ASP 1670.0306
SER 1680.0353
LYS 1690.0605
ASP 1700.0259
SER 1710.0098
THR 1720.0057
TYR 1730.0076
SER 1740.0076
MET 1750.0085
SER 1760.0109
SER 1770.0102
THR 1780.0114
LEU 1790.0094
THR 1800.0059
LEU 1810.0047
THR 1820.0075
LYS 1830.0116
ASP 1840.0169
GLU 1850.0126
TYR 1860.0083
GLU 1870.0122
ARG 1880.0112
HIS 1890.0041
ASN 1900.0093
SER 1910.0106
TYR 1920.0115
THR 1930.0142
CYS 1940.0215
GLU 1950.0209
ALA 1960.0203
THR 1970.0250
HIS 1980.0185
LYS 1990.0257
THR 2000.0341
SER 2010.0463
THR 2020.0685
SER 2030.0539
PRO 2040.0421
ILE 2050.0271
VAL 2060.0171
LYS 2070.0179
SER 2080.0203
PHE 2090.0177
ASN 2100.0150
ARG 2110.0098
ASN 2120.0175
GLU 2130.0109
CYS 2140.0085

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.