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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 55  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0910
ILE 4210.0217
PHE 4220.0163
ILE 4230.0068
SER 4240.0107
ASN 4250.0137
ASP 4260.0167
LYS 4270.0108
GLU 4280.0107
SER 4290.0111
ILE 4300.0087
LYS 4310.0088
CYS 4320.0089
PRO 4330.0060
CYS 4340.0040
GLU 4350.0016
PRO 4360.0094
GLU 4370.0102
ARG 4380.0120
ILE 4390.0199
SER 4400.0119
GLU 4410.0162
SER 4420.0232
THR 4430.0097
CYS 4440.0084
ASN 4450.0129
PHE 4460.0119
TYR 4470.0136
VAL 4480.0089
CYS 4490.0071
ASN 4500.0065
CYS 4510.0054
VAL 4520.0073
GLU 4530.0092
LYS 4540.0156
GLU 10.0640
VAL 20.0302
GLN 30.0260
LEU 40.0056
VAL 50.0055
GLU 60.0067
SER 70.0059
GLY 80.0074
GLY 90.0060
GLY 100.0058
LEU 110.0049
VAL 120.0067
LYS 130.0082
PRO 140.0115
GLY 150.0162
GLY 160.0128
SER 170.0121
LEU 180.0105
LYS 190.0070
LEU 200.0067
SER 210.0067
CYS 220.0062
ALA 230.0063
ALA 240.0064
SER 250.0132
GLY 260.0099
PHE 270.0103
ILE 280.0213
PHE 290.0161
SER 300.0169
ASP 310.0147
TYR 320.0090
TYR 330.0031
MET 340.0038
TYR 350.0039
TRP 360.0051
VAL 370.0065
ARG 380.0064
GLN 390.0044
THR 400.0087
PRO 410.0257
GLU 420.0358
LYS 430.0115
ARG 440.0111
LEU 450.0082
GLU 460.0070
TRP 470.0064
VAL 480.0062
ALA 490.0059
THR 500.0042
ILE 510.0039
SER 520.0058
ASP 520.0077
GLY 530.0112
ASN 540.0146
SER 550.0120
TYR 560.0110
THR 570.0106
TYR 580.0098
TYR 590.0108
VAL 600.0143
ASP 610.0291
SER 620.0243
VAL 630.0108
LYS 640.0143
GLY 650.0111
ARG 660.0032
PHE 670.0028
THR 680.0014
ILE 690.0019
SER 700.0084
ARG 710.0101
ASP 720.0132
ASN 730.0189
ALA 740.0252
LYS 750.0199
ASN 760.0118
ASN 770.0089
LEU 780.0067
TYR 790.0062
LEU 800.0055
GLN 810.0047
MET 820.0107
SER 820.0117
SER 820.0124
LEU 820.0112
LYS 830.0116
SER 840.0108
GLU 850.0107
ASP 860.0093
THR 870.0059
ALA 880.0048
ILE 890.0045
TYR 900.0061
TYR 910.0051
CYS 920.0039
ALA 930.0031
ARG 940.0046
ASP 950.0040
GLY 960.0085
PRO 970.0086
THR 980.0033
ASP 990.0079
SER 1000.0023
SER 1000.0033
GLY 1000.0048
TYR 1000.0043
GLY 1000.0043
GLY 1000.0026
PHE 1000.0031
GLY 1010.0038
TYR 1020.0056
TRP 1030.0039
GLY 1040.0045
GLN 1050.0062
GLY 1060.0058
THR 1070.0060
LEU 1080.0052
VAL 1090.0070
THR 1100.0061
VAL 1110.0086
SER 1120.0134
GLU 1130.0234
ALA 1140.0223
LYS 1150.0196
THR 1160.0151
THR 1170.0121
PRO 1180.0127
PRO 1190.0124
SER 1200.0189
VAL 1210.0160
TYR 1220.0145
PRO 1230.0151
LEU 1240.0114
ALA 1250.0116
PRO 1260.0120
GLY 1270.0243
SER 1280.0261
ALA 1290.0910
ALA 1300.0549
GLN 1330.0670
THR 1340.0360
ASN 1350.0115
SER 1360.0153
MET 1370.0067
VAL 1380.0144
THR 1390.0097
LEU 1400.0105
GLY 1410.0121
CYS 1420.0122
LEU 1430.0113
VAL 1440.0116
LYS 1450.0122
GLY 1460.0074
TYR 1470.0056
PHE 1480.0068
PRO 1490.0071
GLU 1500.0033
PRO 1510.0043
VAL 1520.0052
THR 1530.0105
VAL 1540.0148
THR 1560.0179
TRP 1570.0110
ASN 1620.0127
SER 1630.0155
GLY 1640.0328
SER 1650.0494
LEU 1660.0329
SER 1670.0473
SER 1680.0356
GLY 1690.0141
VAL 1710.0186
HIS 1720.0182
THR 1730.0187
PHE 1740.0137
PRO 1750.0123
ALA 1760.0109
VAL 1770.0117
LEU 1780.0049
GLN 1790.0017
SER 1800.0143
ASP 1830.0098
LEU 1840.0039
TYR 1850.0038
THR 1860.0112
LEU 1870.0123
SER 1880.0138
SER 1890.0161
SER 1900.0149
VAL 1910.0118
THR 1920.0109
VAL 1930.0112
PRO 1940.0116
SER 1950.0170
SER 1960.0305
PRO 1980.0264
ARG 1990.0166
PRO 2000.0142
SER 2020.0257
GLU 2030.0268
THR 2040.0209
VAL 2050.0141
THR 2060.0155
CYS 2080.0171
ASN 2090.0162
VAL 2100.0164
ALA 2110.0143
HIS 2120.0113
PRO 2130.0170
ALA 2140.0200
SER 2150.0220
SER 2160.0287
THR 2170.0192
LYS 2180.0194
VAL 2190.0242
ASP 2200.0186
LYS 2210.0179
LYS 2220.0175
ILE 2230.0148
VAL 2260.0114
PRO 2270.0141
ARG 2280.0098
ASP 2320.0106
CYS 2330.0113
SER 20.0052
VAL 30.0049
LEU 40.0044
SER 50.0029
GLN 60.0029
SER 70.0033
PRO 80.0076
ALA 90.0091
ILE 100.0100
LEU 110.0089
SER 120.0104
ALA 130.0083
SER 140.0065
PRO 150.0141
GLY 160.0183
GLU 170.0141
LYS 180.0149
VAL 190.0094
THR 200.0054
MET 210.0032
THR 220.0038
CYS 230.0027
ARG 240.0018
ALA 250.0025
ARG 260.0052
SER 270.0022
SER 290.0040
VAL 300.0049
SER 310.0057
TYR 320.0056
MET 330.0050
HIS 340.0045
TRP 350.0026
TYR 360.0026
GLN 370.0029
GLN 380.0030
LYS 390.0057
SER 400.0077
GLY 410.0176
SER 420.0120
SER 430.0054
PRO 440.0017
LYS 450.0033
PRO 460.0057
TRP 470.0057
ILE 480.0032
HIS 490.0025
ALA 500.0035
THR 510.0061
SER 520.0063
ASN 530.0091
LEU 540.0092
ALA 550.0120
SER 560.0878
GLY 570.0627
VAL 580.0156
PRO 590.0083
ALA 600.0153
ARG 610.0159
PHE 620.0079
SER 630.0084
GLY 640.0073
SER 650.0068
GLY 660.0059
SER 670.0067
GLY 680.0062
THR 690.0039
SER 700.0039
TYR 710.0055
SER 720.0050
LEU 730.0050
THR 740.0119
ILE 750.0129
SER 760.0186
ARG 770.0240
VAL 780.0128
GLU 790.0212
ALA 800.0095
GLU 810.0126
ASP 820.0098
ALA 830.0081
ALA 840.0077
THR 850.0068
TYR 860.0040
TYR 870.0039
CYS 880.0036
GLN 890.0060
GLN 900.0049
TRP 910.0040
SER 920.0045
SER 930.0059
HIS 940.0076
PRO 950.0064
PRO 960.0057
THR 970.0077
PHE 980.0061
GLY 990.0065
SER 1000.0058
GLY 1010.0057
THR 1020.0062
LYS 1030.0082
LEU 1040.0093
GLU 1050.0104
ILE 1060.0102
LYS 1070.0136
ARG 1080.0162
ALA 1090.0193
ASP 1100.0159
ALA 1110.0200
ALA 1120.0213
PRO 1130.0180
THR 1140.0170
VAL 1150.0158
SER 1160.0087
ILE 1170.0069
PHE 1180.0088
PRO 1190.0109
PRO 1200.0119
SER 1210.0095
SER 1220.0061
GLU 1230.0073
GLN 1240.0122
LEU 1250.0147
THR 1260.0138
SER 1270.0194
GLY 1280.0247
GLY 1290.0227
ALA 1300.0174
SER 1310.0081
VAL 1320.0065
VAL 1330.0082
CYS 1340.0094
PHE 1350.0095
LEU 1360.0110
ASN 1370.0150
ASN 1380.0147
PHE 1390.0141
TYR 1400.0131
PRO 1410.0088
LYS 1420.0081
ASP 1430.0089
ILE 1440.0157
ASN 1450.0218
VAL 1460.0206
LYS 1470.0167
TRP 1480.0111
LYS 1490.0133
ILE 1500.0099
ASP 1510.0080
GLY 1520.0123
SER 1530.0119
GLU 1540.0151
ARG 1550.0178
GLN 1560.0162
ASN 1570.0222
GLY 1580.0134
VAL 1590.0104
LEU 1600.0066
ASN 1610.0066
SER 1620.0072
TRP 1630.0072
THR 1640.0081
ASP 1650.0081
GLN 1660.0086
ASP 1670.0077
SER 1680.0039
LYS 1690.0087
ASP 1700.0170
SER 1710.0116
THR 1720.0116
TYR 1730.0095
SER 1740.0110
MET 1750.0111
SER 1760.0047
SER 1770.0049
THR 1780.0054
LEU 1790.0136
THR 1800.0151
LEU 1810.0143
THR 1820.0279
LYS 1830.0242
ASP 1840.0266
GLU 1850.0234
TYR 1860.0201
GLU 1870.0188
ARG 1880.0214
HIS 1890.0164
ASN 1900.0123
SER 1910.0093
TYR 1920.0116
THR 1930.0134
CYS 1940.0124
GLU 1950.0188
ALA 1960.0228
THR 1970.0260
HIS 1980.0182
LYS 1990.0145
THR 2000.0215
SER 2010.0316
THR 2020.0561
SER 2030.0305
PRO 2040.0302
ILE 2050.0309
VAL 2060.0150
LYS 2070.0122
SER 2080.0100
PHE 2090.0141
ASN 2100.0126
ARG 2110.0141
ASN 2120.0174
GLU 2130.0142
CYS 2140.0098

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.