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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1130
ILE 4210.0194
PHE 4220.0156
ILE 4230.0130
SER 4240.0174
ASN 4250.0180
ASP 4260.0194
LYS 4270.0135
GLU 4280.0142
SER 4290.0177
ILE 4300.0099
LYS 4310.0085
CYS 4320.0082
PRO 4330.0050
CYS 4340.0036
GLU 4350.0055
PRO 4360.0093
GLU 4370.0088
ARG 4380.0107
ILE 4390.0168
SER 4400.0160
GLU 4410.0176
SER 4420.0205
THR 4430.0192
CYS 4440.0220
ASN 4450.0149
PHE 4460.0162
TYR 4470.0165
VAL 4480.0032
CYS 4490.0076
ASN 4500.0107
CYS 4510.0175
VAL 4520.0320
GLU 4530.0379
LYS 4540.1130
GLU 10.0553
VAL 20.0219
GLN 30.0269
LEU 40.0081
VAL 50.0018
GLU 60.0083
SER 70.0156
GLY 80.0190
GLY 90.0197
GLY 100.0205
LEU 110.0142
VAL 120.0162
LYS 130.0172
PRO 140.0078
GLY 150.0147
GLY 160.0121
SER 170.0148
LEU 180.0186
LYS 190.0163
LEU 200.0136
SER 210.0110
CYS 220.0044
ALA 230.0092
ALA 240.0136
SER 250.0051
GLY 260.0093
PHE 270.0057
ILE 280.0136
PHE 290.0128
SER 300.0097
ASP 310.0085
TYR 320.0068
TYR 330.0053
MET 340.0025
TYR 350.0031
TRP 360.0071
VAL 370.0103
ARG 380.0100
GLN 390.0102
THR 400.0155
PRO 410.0146
GLU 420.0158
LYS 430.0137
ARG 440.0132
LEU 450.0133
GLU 460.0059
TRP 470.0068
VAL 480.0087
ALA 490.0068
THR 500.0038
ILE 510.0011
SER 520.0056
ASP 520.0080
GLY 530.0109
ASN 540.0122
SER 550.0075
TYR 560.0048
THR 570.0063
TYR 580.0086
TYR 590.0092
VAL 600.0078
ASP 610.0254
SER 620.0177
VAL 630.0090
LYS 640.0197
GLY 650.0219
ARG 660.0146
PHE 670.0115
THR 680.0122
ILE 690.0102
SER 700.0121
ARG 710.0095
ASP 720.0228
ASN 730.0323
ALA 740.0502
LYS 750.0488
ASN 760.0224
ASN 770.0141
LEU 780.0037
TYR 790.0068
LEU 800.0113
GLN 810.0138
MET 820.0163
SER 820.0144
SER 820.0111
LEU 820.0093
LYS 830.0097
SER 840.0139
GLU 850.0132
ASP 860.0111
THR 870.0148
ALA 880.0135
ILE 890.0140
TYR 900.0129
TYR 910.0072
CYS 920.0066
ALA 930.0046
ARG 940.0051
ASP 950.0066
GLY 960.0085
PRO 970.0145
THR 980.0244
ASP 990.0276
SER 1000.0109
SER 1000.0109
GLY 1000.0127
TYR 1000.0105
GLY 1000.0090
GLY 1000.0052
PHE 1000.0032
GLY 1010.0038
TYR 1020.0024
TRP 1030.0038
GLY 1040.0045
GLN 1050.0077
GLY 1060.0138
THR 1070.0150
LEU 1080.0168
VAL 1090.0184
THR 1100.0156
VAL 1110.0122
SER 1120.0096
GLU 1130.0221
ALA 1140.0181
LYS 1150.0198
THR 1160.0119
THR 1170.0098
PRO 1180.0061
PRO 1190.0061
SER 1200.0075
VAL 1210.0097
TYR 1220.0099
PRO 1230.0091
LEU 1240.0059
ALA 1250.0054
PRO 1260.0049
GLY 1270.0036
SER 1280.0039
ALA 1290.0080
ALA 1300.0048
GLN 1330.0159
THR 1340.0096
ASN 1350.0053
SER 1360.0094
MET 1370.0082
VAL 1380.0056
THR 1390.0040
LEU 1400.0045
GLY 1410.0061
CYS 1420.0083
LEU 1430.0078
VAL 1440.0066
LYS 1450.0066
GLY 1460.0058
TYR 1470.0051
PHE 1480.0058
PRO 1490.0043
GLU 1500.0015
PRO 1510.0055
VAL 1520.0052
THR 1530.0076
VAL 1540.0081
THR 1560.0101
TRP 1570.0058
ASN 1620.0067
SER 1630.0097
GLY 1640.0206
SER 1650.0316
LEU 1660.0228
SER 1670.0288
SER 1680.0245
GLY 1690.0067
VAL 1710.0061
HIS 1720.0055
THR 1730.0067
PHE 1740.0062
PRO 1750.0069
ALA 1760.0049
VAL 1770.0093
LEU 1780.0090
GLN 1790.0120
SER 1800.0254
ASP 1830.0148
LEU 1840.0117
TYR 1850.0088
THR 1860.0053
LEU 1870.0062
SER 1880.0068
SER 1890.0069
SER 1900.0052
VAL 1910.0032
THR 1920.0051
VAL 1930.0059
PRO 1940.0068
SER 1950.0079
SER 1960.0054
PRO 1980.0058
ARG 1990.0066
PRO 2000.0095
SER 2020.0155
GLU 2030.0109
THR 2040.0054
VAL 2050.0032
THR 2060.0032
CYS 2080.0070
ASN 2090.0057
VAL 2100.0060
ALA 2110.0062
HIS 2120.0058
PRO 2130.0106
ALA 2140.0076
SER 2150.0068
SER 2160.0130
THR 2170.0102
LYS 2180.0100
VAL 2190.0060
ASP 2200.0060
LYS 2210.0065
LYS 2220.0053
ILE 2230.0053
VAL 2260.0065
PRO 2270.0083
ARG 2280.0080
ASP 2320.0137
CYS 2330.0120
SER 20.0235
VAL 30.0194
LEU 40.0081
SER 50.0060
GLN 60.0136
SER 70.0197
PRO 80.0196
ALA 90.0216
ILE 100.0169
LEU 110.0137
SER 120.0135
ALA 130.0101
SER 140.0180
PRO 150.0198
GLY 160.0215
GLU 170.0181
LYS 180.0133
VAL 190.0074
THR 200.0165
MET 210.0177
THR 220.0194
CYS 230.0130
ARG 240.0066
ALA 250.0124
ARG 260.0320
SER 270.0486
SER 290.0315
VAL 300.0184
SER 310.0220
TYR 320.0110
MET 330.0109
HIS 340.0123
TRP 350.0122
TYR 360.0115
GLN 370.0110
GLN 380.0089
LYS 390.0094
SER 400.0132
GLY 410.0149
SER 420.0140
SER 430.0115
PRO 440.0095
LYS 450.0110
PRO 460.0123
TRP 470.0130
ILE 480.0117
HIS 490.0122
ALA 500.0124
THR 510.0142
SER 520.0127
ASN 530.0110
LEU 540.0058
ALA 550.0070
SER 560.0767
GLY 570.0633
VAL 580.0187
PRO 590.0075
ALA 600.0101
ARG 610.0110
PHE 620.0098
SER 630.0130
GLY 640.0170
SER 650.0260
GLY 660.0219
SER 670.0224
GLY 680.0344
THR 690.0237
SER 700.0211
TYR 710.0148
SER 720.0188
LEU 730.0208
THR 740.0196
ILE 750.0085
SER 760.0160
ARG 770.0211
VAL 780.0087
GLU 790.0173
ALA 800.0089
GLU 810.0084
ASP 820.0071
ALA 830.0096
ALA 840.0093
THR 850.0106
TYR 860.0110
TYR 870.0127
CYS 880.0129
GLN 890.0083
GLN 900.0074
TRP 910.0065
SER 920.0049
SER 930.0121
HIS 940.0174
PRO 950.0158
PRO 960.0121
THR 970.0116
PHE 980.0112
GLY 990.0114
SER 1000.0115
GLY 1010.0171
THR 1020.0141
LYS 1030.0137
LEU 1040.0089
GLU 1050.0117
ILE 1060.0110
LYS 1070.0126
ARG 1080.0040
ALA 1090.0072
ASP 1100.0108
ALA 1110.0090
ALA 1120.0076
PRO 1130.0052
THR 1140.0055
VAL 1150.0044
SER 1160.0034
ILE 1170.0055
PHE 1180.0056
PRO 1190.0078
PRO 1200.0070
SER 1210.0077
SER 1220.0088
GLU 1230.0107
GLN 1240.0111
LEU 1250.0093
THR 1260.0158
SER 1270.0200
GLY 1280.0102
GLY 1290.0100
ALA 1300.0080
SER 1310.0055
VAL 1320.0062
VAL 1330.0060
CYS 1340.0049
PHE 1350.0024
LEU 1360.0019
ASN 1370.0057
ASN 1380.0081
PHE 1390.0076
TYR 1400.0079
PRO 1410.0073
LYS 1420.0079
ASP 1430.0119
ILE 1440.0079
ASN 1450.0104
VAL 1460.0086
LYS 1470.0077
TRP 1480.0072
LYS 1490.0030
ILE 1500.0046
ASP 1510.0104
GLY 1520.0204
SER 1530.0176
GLU 1540.0144
ARG 1550.0060
GLN 1560.0054
ASN 1570.0081
GLY 1580.0056
VAL 1590.0072
LEU 1600.0079
ASN 1610.0078
SER 1620.0066
TRP 1630.0089
THR 1640.0110
ASP 1650.0142
GLN 1660.0113
ASP 1670.0214
SER 1680.0195
LYS 1690.0312
ASP 1700.0164
SER 1710.0084
THR 1720.0084
TYR 1730.0075
SER 1740.0064
MET 1750.0050
SER 1760.0019
SER 1770.0036
THR 1780.0052
LEU 1790.0060
THR 1800.0053
LEU 1810.0050
THR 1820.0069
LYS 1830.0056
ASP 1840.0021
GLU 1850.0031
TYR 1860.0048
GLU 1870.0040
ARG 1880.0059
HIS 1890.0082
ASN 1900.0113
SER 1910.0115
TYR 1920.0091
THR 1930.0090
CYS 1940.0095
GLU 1950.0098
ALA 1960.0092
THR 1970.0103
HIS 1980.0070
LYS 1990.0110
THR 2000.0116
SER 2010.0071
THR 2020.0117
SER 2030.0157
PRO 2040.0149
ILE 2050.0118
VAL 2060.0103
LYS 2070.0086
SER 2080.0080
PHE 2090.0105
ASN 2100.0107
ARG 2110.0107
ASN 2120.0084
GLU 2130.0074
CYS 2140.0080

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.