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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 57  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1084
ILE 4210.0178
PHE 4220.0121
ILE 4230.0130
SER 4240.0135
ASN 4250.0137
ASP 4260.0090
LYS 4270.0072
GLU 4280.0053
SER 4290.0054
ILE 4300.0057
LYS 4310.0086
CYS 4320.0097
PRO 4330.0126
CYS 4340.0114
GLU 4350.0090
PRO 4360.0104
GLU 4370.0128
ARG 4380.0153
ILE 4390.0197
SER 4400.0119
GLU 4410.0141
SER 4420.0558
THR 4430.0092
CYS 4440.0458
ASN 4450.0204
PHE 4460.0179
TYR 4470.0170
VAL 4480.0066
CYS 4490.0058
ASN 4500.0066
CYS 4510.0080
VAL 4520.0236
GLU 4530.0341
LYS 4540.1042
GLU 10.0092
VAL 20.0027
GLN 30.0081
LEU 40.0024
VAL 50.0038
GLU 60.0053
SER 70.0047
GLY 80.0037
GLY 90.0052
GLY 100.0082
LEU 110.0098
VAL 120.0046
LYS 130.0054
PRO 140.0241
GLY 150.0366
GLY 160.0225
SER 170.0170
LEU 180.0090
LYS 190.0035
LEU 200.0025
SER 210.0028
CYS 220.0030
ALA 230.0050
ALA 240.0063
SER 250.0094
GLY 260.0110
PHE 270.0128
ILE 280.0161
PHE 290.0106
SER 300.0075
ASP 310.0088
TYR 320.0074
TYR 330.0093
MET 340.0077
TYR 350.0087
TRP 360.0080
VAL 370.0067
ARG 380.0049
GLN 390.0059
THR 400.0102
PRO 410.0155
GLU 420.0167
LYS 430.0123
ARG 440.0127
LEU 450.0102
GLU 460.0121
TRP 470.0132
VAL 480.0119
ALA 490.0133
THR 500.0137
ILE 510.0120
SER 520.0121
ASP 520.0066
GLY 530.0100
ASN 540.0162
SER 550.0151
TYR 560.0163
THR 570.0182
TYR 580.0166
TYR 590.0159
VAL 600.0176
ASP 610.0256
SER 620.0172
VAL 630.0059
LYS 640.0112
GLY 650.0165
ARG 660.0136
PHE 670.0034
THR 680.0056
ILE 690.0066
SER 700.0131
ARG 710.0084
ASP 720.0136
ASN 730.0156
ALA 740.0300
LYS 750.0295
ASN 760.0126
ASN 770.0079
LEU 780.0038
TYR 790.0031
LEU 800.0028
GLN 810.0051
MET 820.0130
SER 820.0203
SER 820.0272
LEU 820.0232
LYS 830.0290
SER 840.0300
GLU 850.0271
ASP 860.0176
THR 870.0160
ALA 880.0069
ILE 890.0062
TYR 900.0045
TYR 910.0048
CYS 920.0059
ALA 930.0074
ARG 940.0104
ASP 950.0103
GLY 960.0137
PRO 970.0212
THR 980.0215
ASP 990.0187
SER 1000.0128
SER 1000.0096
GLY 1000.0070
TYR 1000.0071
GLY 1000.0066
GLY 1000.0096
PHE 1000.0109
GLY 1010.0121
TYR 1020.0131
TRP 1030.0053
GLY 1040.0050
GLN 1050.0051
GLY 1060.0057
THR 1070.0056
LEU 1080.0070
VAL 1090.0105
THR 1100.0132
VAL 1110.0143
SER 1120.0196
GLU 1130.0228
ALA 1140.0337
LYS 1150.0335
THR 1160.0235
THR 1170.0185
PRO 1180.0111
PRO 1190.0068
SER 1200.0051
VAL 1210.0060
TYR 1220.0075
PRO 1230.0100
LEU 1240.0071
ALA 1250.0096
PRO 1260.0110
GLY 1270.0102
SER 1280.0096
ALA 1290.0114
ALA 1300.0074
GLN 1330.0133
THR 1340.0122
ASN 1350.0101
SER 1360.0127
MET 1370.0087
VAL 1380.0058
THR 1390.0067
LEU 1400.0071
GLY 1410.0063
CYS 1420.0057
LEU 1430.0026
VAL 1440.0056
LYS 1450.0130
GLY 1460.0157
TYR 1470.0178
PHE 1480.0204
PRO 1490.0205
GLU 1500.0196
PRO 1510.0179
VAL 1520.0118
THR 1530.0159
VAL 1540.0018
THR 1560.0103
TRP 1570.0106
ASN 1620.0188
SER 1630.0217
GLY 1640.0285
SER 1650.0336
LEU 1660.0246
SER 1670.0289
SER 1680.0264
GLY 1690.0165
VAL 1710.0074
HIS 1720.0060
THR 1730.0073
PHE 1740.0087
PRO 1750.0116
ALA 1760.0124
VAL 1770.0099
LEU 1780.0125
GLN 1790.0307
SER 1800.1084
ASP 1830.0220
LEU 1840.0229
TYR 1850.0233
THR 1860.0121
LEU 1870.0117
SER 1880.0107
SER 1890.0040
SER 1900.0048
VAL 1910.0064
THR 1920.0085
VAL 1930.0094
PRO 1940.0114
SER 1950.0127
SER 1960.0196
PRO 1980.0157
ARG 1990.0092
PRO 2000.0089
SER 2020.0144
GLU 2030.0146
THR 2040.0159
VAL 2050.0107
THR 2060.0100
CYS 2080.0074
ASN 2090.0069
VAL 2100.0070
ALA 2110.0150
HIS 2120.0078
PRO 2130.0151
ALA 2140.0080
SER 2150.0088
SER 2160.0159
THR 2170.0180
LYS 2180.0249
VAL 2190.0224
ASP 2200.0120
LYS 2210.0121
LYS 2220.0133
ILE 2230.0114
VAL 2260.0135
PRO 2270.0154
ARG 2280.0143
ASP 2320.0149
CYS 2330.0191
SER 20.0102
VAL 30.0095
LEU 40.0064
SER 50.0066
GLN 60.0070
SER 70.0085
PRO 80.0072
ALA 90.0114
ILE 100.0119
LEU 110.0115
SER 120.0137
ALA 130.0137
SER 140.0162
PRO 150.0182
GLY 160.0169
GLU 170.0168
LYS 180.0117
VAL 190.0061
THR 200.0012
MET 210.0048
THR 220.0071
CYS 230.0080
ARG 240.0056
ALA 250.0019
ARG 260.0096
SER 270.0149
SER 290.0094
VAL 300.0045
SER 310.0074
TYR 320.0070
MET 330.0081
HIS 340.0096
TRP 350.0058
TYR 360.0056
GLN 370.0058
GLN 380.0024
LYS 390.0029
SER 400.0066
GLY 410.0128
SER 420.0088
SER 430.0048
PRO 440.0053
LYS 450.0065
PRO 460.0069
TRP 470.0079
ILE 480.0073
HIS 490.0093
ALA 500.0108
THR 510.0090
SER 520.0069
ASN 530.0064
LEU 540.0024
ALA 550.0063
SER 560.0215
GLY 570.0264
VAL 580.0128
PRO 590.0156
ALA 600.0147
ARG 610.0137
PHE 620.0039
SER 630.0021
GLY 640.0051
SER 650.0079
GLY 660.0074
SER 670.0069
GLY 680.0107
THR 690.0077
SER 700.0095
TYR 710.0072
SER 720.0069
LEU 730.0058
THR 740.0026
ILE 750.0082
SER 760.0140
ARG 770.0163
VAL 780.0149
GLU 790.0220
ALA 800.0092
GLU 810.0120
ASP 820.0127
ALA 830.0103
ALA 840.0078
THR 850.0060
TYR 860.0036
TYR 870.0040
CYS 880.0044
GLN 890.0094
GLN 900.0060
TRP 910.0054
SER 920.0032
SER 930.0109
HIS 940.0200
PRO 950.0178
PRO 960.0137
THR 970.0165
PHE 980.0055
GLY 990.0043
SER 1000.0045
GLY 1010.0070
THR 1020.0062
LYS 1030.0079
LEU 1040.0111
GLU 1050.0112
ILE 1060.0112
LYS 1070.0096
ARG 1080.0055
ALA 1090.0112
ASP 1100.0139
ALA 1110.0121
ALA 1120.0116
PRO 1130.0053
THR 1140.0021
VAL 1150.0055
SER 1160.0062
ILE 1170.0069
PHE 1180.0063
PRO 1190.0070
PRO 1200.0060
SER 1210.0059
SER 1220.0066
GLU 1230.0081
GLN 1240.0092
LEU 1250.0118
THR 1260.0209
SER 1270.0262
GLY 1280.0173
GLY 1290.0147
ALA 1300.0100
SER 1310.0058
VAL 1320.0063
VAL 1330.0066
CYS 1340.0068
PHE 1350.0038
LEU 1360.0038
ASN 1370.0044
ASN 1380.0061
PHE 1390.0073
TYR 1400.0096
PRO 1410.0094
LYS 1420.0097
ASP 1430.0141
ILE 1440.0131
ASN 1450.0186
VAL 1460.0124
LYS 1470.0092
TRP 1480.0061
LYS 1490.0069
ILE 1500.0059
ASP 1510.0113
GLY 1520.0304
SER 1530.0308
GLU 1540.0248
ARG 1550.0098
GLN 1560.0106
ASN 1570.0125
GLY 1580.0051
VAL 1590.0031
LEU 1600.0047
ASN 1610.0086
SER 1620.0084
TRP 1630.0083
THR 1640.0097
ASP 1650.0124
GLN 1660.0099
ASP 1670.0202
SER 1680.0187
LYS 1690.0282
ASP 1700.0161
SER 1710.0083
THR 1720.0078
TYR 1730.0070
SER 1740.0058
MET 1750.0062
SER 1760.0036
SER 1770.0045
THR 1780.0042
LEU 1790.0072
THR 1800.0072
LEU 1810.0077
THR 1820.0136
LYS 1830.0114
ASP 1840.0094
GLU 1850.0082
TYR 1860.0078
GLU 1870.0057
ARG 1880.0036
HIS 1890.0047
ASN 1900.0068
SER 1910.0108
TYR 1920.0091
THR 1930.0106
CYS 1940.0112
GLU 1950.0147
ALA 1960.0170
THR 1970.0191
HIS 1980.0135
LYS 1990.0131
THR 2000.0170
SER 2010.0148
THR 2020.0171
SER 2030.0250
PRO 2040.0240
ILE 2050.0165
VAL 2060.0145
LYS 2070.0091
SER 2080.0062
PHE 2090.0071
ASN 2100.0081
ARG 2110.0076
ASN 2120.0134
GLU 2130.0138
CYS 2140.0143

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.