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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0937
ILE 4210.0162
PHE 4220.0133
ILE 4230.0055
SER 4240.0048
ASN 4250.0067
ASP 4260.0117
LYS 4270.0072
GLU 4280.0118
SER 4290.0100
ILE 4300.0094
LYS 4310.0128
CYS 4320.0124
PRO 4330.0102
CYS 4340.0085
GLU 4350.0061
PRO 4360.0087
GLU 4370.0077
ARG 4380.0066
ILE 4390.0090
SER 4400.0073
GLU 4410.0074
SER 4420.0181
THR 4430.0053
CYS 4440.0135
ASN 4450.0060
PHE 4460.0040
TYR 4470.0055
VAL 4480.0061
CYS 4490.0083
ASN 4500.0096
CYS 4510.0189
VAL 4520.0260
GLU 4530.0267
LYS 4540.0937
GLU 10.0705
VAL 20.0337
GLN 30.0268
LEU 40.0043
VAL 50.0060
GLU 60.0106
SER 70.0170
GLY 80.0153
GLY 90.0096
GLY 100.0171
LEU 110.0174
VAL 120.0182
LYS 130.0288
PRO 140.0246
GLY 150.0234
GLY 160.0062
SER 170.0075
LEU 180.0141
LYS 190.0178
LEU 200.0152
SER 210.0142
CYS 220.0134
ALA 230.0134
ALA 240.0142
SER 250.0074
GLY 260.0083
PHE 270.0102
ILE 280.0189
PHE 290.0141
SER 300.0131
ASP 310.0091
TYR 320.0032
TYR 330.0060
MET 340.0074
TYR 350.0104
TRP 360.0129
VAL 370.0095
ARG 380.0075
GLN 390.0067
THR 400.0051
PRO 410.0095
GLU 420.0056
LYS 430.0050
ARG 440.0046
LEU 450.0052
GLU 460.0081
TRP 470.0085
VAL 480.0092
ALA 490.0152
THR 500.0130
ILE 510.0105
SER 520.0140
ASP 520.0113
GLY 530.0183
ASN 540.0239
SER 550.0153
TYR 560.0176
THR 570.0177
TYR 580.0123
TYR 590.0116
VAL 600.0105
ASP 610.0275
SER 620.0213
VAL 630.0149
LYS 640.0264
GLY 650.0308
ARG 660.0214
PHE 670.0150
THR 680.0168
ILE 690.0159
SER 700.0182
ARG 710.0098
ASP 720.0228
ASN 730.0373
ALA 740.0590
LYS 750.0556
ASN 760.0232
ASN 770.0147
LEU 780.0081
TYR 790.0125
LEU 800.0162
GLN 810.0172
MET 820.0148
SER 820.0102
SER 820.0082
LEU 820.0055
LYS 830.0156
SER 840.0219
GLU 850.0162
ASP 860.0052
THR 870.0108
ALA 880.0053
ILE 890.0085
TYR 900.0098
TYR 910.0093
CYS 920.0092
ALA 930.0081
ARG 940.0033
ASP 950.0027
GLY 960.0066
PRO 970.0082
THR 980.0091
ASP 990.0093
SER 1000.0045
SER 1000.0040
GLY 1000.0040
TYR 1000.0039
GLY 1000.0041
GLY 1000.0041
PHE 1000.0044
GLY 1010.0046
TYR 1020.0051
TRP 1030.0039
GLY 1040.0047
GLN 1050.0059
GLY 1060.0121
THR 1070.0097
LEU 1080.0065
VAL 1090.0109
THR 1100.0139
VAL 1110.0147
SER 1120.0162
GLU 1130.0212
ALA 1140.0201
LYS 1150.0308
THR 1160.0184
THR 1170.0145
PRO 1180.0030
PRO 1190.0061
SER 1200.0101
VAL 1210.0165
TYR 1220.0146
PRO 1230.0121
LEU 1240.0054
ALA 1250.0046
PRO 1260.0088
GLY 1270.0254
SER 1280.0297
ALA 1290.0311
ALA 1300.0341
GLN 1330.0472
THR 1340.0307
ASN 1350.0265
SER 1360.0124
MET 1370.0159
VAL 1380.0158
THR 1390.0033
LEU 1400.0012
GLY 1410.0017
CYS 1420.0100
LEU 1430.0103
VAL 1440.0091
LYS 1450.0101
GLY 1460.0067
TYR 1470.0065
PHE 1480.0125
PRO 1490.0115
GLU 1500.0098
PRO 1510.0052
VAL 1520.0034
THR 1530.0083
VAL 1540.0062
THR 1560.0088
TRP 1570.0073
ASN 1620.0119
SER 1630.0160
GLY 1640.0175
SER 1650.0170
LEU 1660.0088
SER 1670.0128
SER 1680.0102
GLY 1690.0095
VAL 1710.0077
HIS 1720.0050
THR 1730.0041
PHE 1740.0089
PRO 1750.0092
ALA 1760.0091
VAL 1770.0180
LEU 1780.0175
GLN 1790.0193
SER 1800.0433
ASP 1830.0218
LEU 1840.0175
TYR 1850.0158
THR 1860.0095
LEU 1870.0095
SER 1880.0097
SER 1890.0041
SER 1900.0037
VAL 1910.0036
THR 1920.0091
VAL 1930.0112
PRO 1940.0136
SER 1950.0127
SER 1960.0154
PRO 1980.0161
ARG 1990.0165
PRO 2000.0197
SER 2020.0355
GLU 2030.0232
THR 2040.0103
VAL 2050.0077
THR 2060.0080
CYS 2080.0119
ASN 2090.0111
VAL 2100.0119
ALA 2110.0149
HIS 2120.0086
PRO 2130.0157
ALA 2140.0168
SER 2150.0151
SER 2160.0237
THR 2170.0177
LYS 2180.0187
VAL 2190.0205
ASP 2200.0148
LYS 2210.0149
LYS 2220.0138
ILE 2230.0114
VAL 2260.0168
PRO 2270.0159
ARG 2280.0120
ASP 2320.0149
CYS 2330.0317
SER 20.0122
VAL 30.0084
LEU 40.0019
SER 50.0071
GLN 60.0089
SER 70.0137
PRO 80.0133
ALA 90.0155
ILE 100.0133
LEU 110.0091
SER 120.0106
ALA 130.0094
SER 140.0132
PRO 150.0152
GLY 160.0140
GLU 170.0124
LYS 180.0093
VAL 190.0073
THR 200.0090
MET 210.0094
THR 220.0112
CYS 230.0091
ARG 240.0081
ALA 250.0064
ARG 260.0091
SER 270.0211
SER 290.0162
VAL 300.0086
SER 310.0085
TYR 320.0027
MET 330.0023
HIS 340.0030
TRP 350.0026
TYR 360.0018
GLN 370.0023
GLN 380.0014
LYS 390.0013
SER 400.0034
GLY 410.0171
SER 420.0110
SER 430.0050
PRO 440.0025
LYS 450.0025
PRO 460.0017
TRP 470.0043
ILE 480.0036
HIS 490.0047
ALA 500.0037
THR 510.0043
SER 520.0049
ASN 530.0049
LEU 540.0048
ALA 550.0064
SER 560.0258
GLY 570.0159
VAL 580.0083
PRO 590.0106
ALA 600.0111
ARG 610.0108
PHE 620.0050
SER 630.0039
GLY 640.0048
SER 650.0113
GLY 660.0119
SER 670.0123
GLY 680.0179
THR 690.0133
SER 700.0143
TYR 710.0084
SER 720.0091
LEU 730.0089
THR 740.0063
ILE 750.0076
SER 760.0114
ARG 770.0127
VAL 780.0126
GLU 790.0193
ALA 800.0092
GLU 810.0111
ASP 820.0114
ALA 830.0093
ALA 840.0066
THR 850.0046
TYR 860.0020
TYR 870.0021
CYS 880.0019
GLN 890.0033
GLN 900.0029
TRP 910.0033
SER 920.0097
SER 930.0061
HIS 940.0036
PRO 950.0029
PRO 960.0026
THR 970.0028
PHE 980.0012
GLY 990.0018
SER 1000.0030
GLY 1010.0075
THR 1020.0068
LYS 1030.0079
LEU 1040.0094
GLU 1050.0103
ILE 1060.0107
LYS 1070.0091
ARG 1080.0037
ALA 1090.0069
ASP 1100.0174
ALA 1110.0146
ALA 1120.0146
PRO 1130.0063
THR 1140.0078
VAL 1150.0041
SER 1160.0005
ILE 1170.0030
PHE 1180.0057
PRO 1190.0083
PRO 1200.0073
SER 1210.0087
SER 1220.0074
GLU 1230.0161
GLN 1240.0170
LEU 1250.0174
THR 1260.0341
SER 1270.0377
GLY 1280.0196
GLY 1290.0148
ALA 1300.0094
SER 1310.0063
VAL 1320.0055
VAL 1330.0054
CYS 1340.0021
PHE 1350.0027
LEU 1360.0033
ASN 1370.0058
ASN 1380.0068
PHE 1390.0076
TYR 1400.0095
PRO 1410.0100
LYS 1420.0088
ASP 1430.0118
ILE 1440.0078
ASN 1450.0099
VAL 1460.0057
LYS 1470.0039
TRP 1480.0026
LYS 1490.0028
ILE 1500.0037
ASP 1510.0051
GLY 1520.0087
SER 1530.0110
GLU 1540.0134
ARG 1550.0074
GLN 1560.0066
ASN 1570.0068
GLY 1580.0050
VAL 1590.0054
LEU 1600.0096
ASN 1610.0070
SER 1620.0067
TRP 1630.0042
THR 1640.0045
ASP 1650.0062
GLN 1660.0049
ASP 1670.0192
SER 1680.0209
LYS 1690.0400
ASP 1700.0171
SER 1710.0067
THR 1720.0041
TYR 1730.0038
SER 1740.0038
MET 1750.0044
SER 1760.0045
SER 1770.0041
THR 1780.0042
LEU 1790.0058
THR 1800.0053
LEU 1810.0059
THR 1820.0092
LYS 1830.0148
ASP 1840.0204
GLU 1850.0116
TYR 1860.0090
GLU 1870.0108
ARG 1880.0072
HIS 1890.0045
ASN 1900.0097
SER 1910.0068
TYR 1920.0048
THR 1930.0025
CYS 1940.0022
GLU 1950.0053
ALA 1960.0073
THR 1970.0107
HIS 1980.0103
LYS 1990.0157
THR 2000.0147
SER 2010.0044
THR 2020.0170
SER 2030.0174
PRO 2040.0131
ILE 2050.0048
VAL 2060.0047
LYS 2070.0027
SER 2080.0048
PHE 2090.0127
ASN 2100.0124
ARG 2110.0119
ASN 2120.0288
GLU 2130.0305
CYS 2140.0385

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.