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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0933
ILE 4210.0286
PHE 4220.0137
ILE 4230.0105
SER 4240.0178
ASN 4250.0200
ASP 4260.0213
LYS 4270.0117
GLU 4280.0129
SER 4290.0162
ILE 4300.0093
LYS 4310.0102
CYS 4320.0089
PRO 4330.0050
CYS 4340.0051
GLU 4350.0053
PRO 4360.0088
GLU 4370.0068
ARG 4380.0088
ILE 4390.0189
SER 4400.0175
GLU 4410.0229
SER 4420.0203
THR 4430.0166
CYS 4440.0163
ASN 4450.0152
PHE 4460.0157
TYR 4470.0159
VAL 4480.0066
CYS 4490.0071
ASN 4500.0065
CYS 4510.0048
VAL 4520.0052
GLU 4530.0050
LYS 4540.0133
GLU 10.0030
VAL 20.0039
GLN 30.0064
LEU 40.0075
VAL 50.0083
GLU 60.0103
SER 70.0101
GLY 80.0101
GLY 90.0106
GLY 100.0123
LEU 110.0085
VAL 120.0091
LYS 130.0164
PRO 140.0133
GLY 150.0088
GLY 160.0073
SER 170.0081
LEU 180.0105
LYS 190.0088
LEU 200.0086
SER 210.0085
CYS 220.0077
ALA 230.0058
ALA 240.0057
SER 250.0031
GLY 260.0064
PHE 270.0074
ILE 280.0089
PHE 290.0062
SER 300.0063
ASP 310.0071
TYR 320.0079
TYR 330.0085
MET 340.0067
TYR 350.0069
TRP 360.0072
VAL 370.0096
ARG 380.0091
GLN 390.0078
THR 400.0020
PRO 410.0253
GLU 420.0321
LYS 430.0114
ARG 440.0059
LEU 450.0037
GLU 460.0076
TRP 470.0066
VAL 480.0073
ALA 490.0060
THR 500.0048
ILE 510.0060
SER 520.0066
ASP 520.0102
GLY 530.0155
ASN 540.0184
SER 550.0116
TYR 560.0103
THR 570.0080
TYR 580.0081
TYR 590.0098
VAL 600.0143
ASP 610.0393
SER 620.0330
VAL 630.0153
LYS 640.0220
GLY 650.0189
ARG 660.0072
PHE 670.0037
THR 680.0015
ILE 690.0029
SER 700.0085
ARG 710.0040
ASP 720.0088
ASN 730.0067
ALA 740.0190
LYS 750.0228
ASN 760.0089
ASN 770.0067
LEU 780.0047
TYR 790.0067
LEU 800.0067
GLN 810.0075
MET 820.0076
SER 820.0065
SER 820.0064
LEU 820.0064
LYS 830.0064
SER 840.0064
GLU 850.0067
ASP 860.0066
THR 870.0052
ALA 880.0063
ILE 890.0081
TYR 900.0094
TYR 910.0101
CYS 920.0094
ALA 930.0085
ARG 940.0119
ASP 950.0115
GLY 960.0119
PRO 970.0191
THR 980.0159
ASP 990.0178
SER 1000.0101
SER 1000.0103
GLY 1000.0101
TYR 1000.0083
GLY 1000.0075
GLY 1000.0076
PHE 1000.0087
GLY 1010.0098
TYR 1020.0114
TRP 1030.0075
GLY 1040.0075
GLN 1050.0074
GLY 1060.0101
THR 1070.0092
LEU 1080.0075
VAL 1090.0090
THR 1100.0072
VAL 1110.0076
SER 1120.0170
GLU 1130.0285
ALA 1140.0191
LYS 1150.0260
THR 1160.0213
THR 1170.0170
PRO 1180.0150
PRO 1190.0136
SER 1200.0155
VAL 1210.0085
TYR 1220.0066
PRO 1230.0054
LEU 1240.0051
ALA 1250.0059
PRO 1260.0059
GLY 1270.0247
SER 1280.0142
ALA 1290.0755
ALA 1300.0495
GLN 1330.0600
THR 1340.0310
ASN 1350.0148
SER 1360.0244
MET 1370.0147
VAL 1380.0115
THR 1390.0038
LEU 1400.0032
GLY 1410.0034
CYS 1420.0061
LEU 1430.0080
VAL 1440.0099
LYS 1450.0128
GLY 1460.0134
TYR 1470.0145
PHE 1480.0139
PRO 1490.0142
GLU 1500.0130
PRO 1510.0140
VAL 1520.0100
THR 1530.0113
VAL 1540.0084
THR 1560.0100
TRP 1570.0112
ASN 1620.0234
SER 1630.0247
GLY 1640.0152
SER 1650.0201
LEU 1660.0144
SER 1670.0099
SER 1680.0234
GLY 1690.0179
VAL 1710.0118
HIS 1720.0119
THR 1730.0122
PHE 1740.0170
PRO 1750.0199
ALA 1760.0193
VAL 1770.0221
LEU 1780.0157
GLN 1790.0137
SER 1800.0489
ASP 1830.0046
LEU 1840.0101
TYR 1850.0137
THR 1860.0131
LEU 1870.0125
SER 1880.0111
SER 1890.0080
SER 1900.0089
VAL 1910.0092
THR 1920.0036
VAL 1930.0051
PRO 1940.0083
SER 1950.0128
SER 1960.0126
PRO 1980.0117
ARG 1990.0105
PRO 2000.0127
SER 2020.0239
GLU 2030.0141
THR 2040.0056
VAL 2050.0101
THR 2060.0118
CYS 2080.0134
ASN 2090.0146
VAL 2100.0125
ALA 2110.0232
HIS 2120.0156
PRO 2130.0224
ALA 2140.0208
SER 2150.0136
SER 2160.0238
THR 2170.0257
LYS 2180.0309
VAL 2190.0312
ASP 2200.0159
LYS 2210.0158
LYS 2220.0149
ILE 2230.0089
VAL 2260.0116
PRO 2270.0072
ARG 2280.0040
ASP 2320.0077
CYS 2330.0114
SER 20.0041
VAL 30.0066
LEU 40.0054
SER 50.0066
GLN 60.0044
SER 70.0050
PRO 80.0155
ALA 90.0151
ILE 100.0194
LEU 110.0204
SER 120.0254
ALA 130.0252
SER 140.0329
PRO 150.0240
GLY 160.0167
GLU 170.0184
LYS 180.0211
VAL 190.0194
THR 200.0094
MET 210.0040
THR 220.0042
CYS 230.0030
ARG 240.0050
ALA 250.0053
ARG 260.0124
SER 270.0124
SER 290.0114
VAL 300.0081
SER 310.0091
TYR 320.0066
MET 330.0055
HIS 340.0064
TRP 350.0047
TYR 360.0032
GLN 370.0034
GLN 380.0054
LYS 390.0113
SER 400.0153
GLY 410.0270
SER 420.0152
SER 430.0076
PRO 440.0058
LYS 450.0041
PRO 460.0106
TRP 470.0107
ILE 480.0077
HIS 490.0078
ALA 500.0078
THR 510.0074
SER 520.0076
ASN 530.0097
LEU 540.0091
ALA 550.0138
SER 560.0933
GLY 570.0534
VAL 580.0213
PRO 590.0298
ALA 600.0329
ARG 610.0242
PHE 620.0173
SER 630.0151
GLY 640.0109
SER 650.0063
GLY 660.0095
SER 670.0119
GLY 680.0102
THR 690.0095
SER 700.0087
TYR 710.0049
SER 720.0063
LEU 730.0079
THR 740.0159
ILE 750.0146
SER 760.0207
ARG 770.0129
VAL 780.0107
GLU 790.0234
ALA 800.0233
GLU 810.0251
ASP 820.0190
ALA 830.0187
ALA 840.0145
THR 850.0112
TYR 860.0033
TYR 870.0025
CYS 880.0024
GLN 890.0056
GLN 900.0046
TRP 910.0043
SER 920.0052
SER 930.0047
HIS 940.0037
PRO 950.0025
PRO 960.0034
THR 970.0046
PHE 980.0023
GLY 990.0028
SER 1000.0051
GLY 1010.0058
THR 1020.0093
LYS 1030.0141
LEU 1040.0196
GLU 1050.0218
ILE 1060.0227
LYS 1070.0189
ARG 1080.0205
ALA 1090.0241
ASP 1100.0274
ALA 1110.0231
ALA 1120.0230
PRO 1130.0050
THR 1140.0055
VAL 1150.0067
SER 1160.0095
ILE 1170.0082
PHE 1180.0081
PRO 1190.0064
PRO 1200.0049
SER 1210.0051
SER 1220.0047
GLU 1230.0045
GLN 1240.0036
LEU 1250.0030
THR 1260.0028
SER 1270.0030
GLY 1280.0056
GLY 1290.0036
ALA 1300.0044
SER 1310.0050
VAL 1320.0059
VAL 1330.0062
CYS 1340.0028
PHE 1350.0039
LEU 1360.0027
ASN 1370.0087
ASN 1380.0103
PHE 1390.0118
TYR 1400.0173
PRO 1410.0155
LYS 1420.0150
ASP 1430.0194
ILE 1440.0150
ASN 1450.0269
VAL 1460.0181
LYS 1470.0145
TRP 1480.0099
LYS 1490.0161
ILE 1500.0148
ASP 1510.0138
GLY 1520.0281
SER 1530.0248
GLU 1540.0312
ARG 1550.0291
GLN 1560.0228
ASN 1570.0246
GLY 1580.0116
VAL 1590.0083
LEU 1600.0066
ASN 1610.0114
SER 1620.0161
TRP 1630.0172
THR 1640.0122
ASP 1650.0030
GLN 1660.0063
ASP 1670.0073
SER 1680.0076
LYS 1690.0194
ASP 1700.0178
SER 1710.0110
THR 1720.0069
TYR 1730.0063
SER 1740.0087
MET 1750.0104
SER 1760.0084
SER 1770.0042
THR 1780.0044
LEU 1790.0090
THR 1800.0072
LEU 1810.0068
THR 1820.0075
LYS 1830.0086
ASP 1840.0118
GLU 1850.0083
TYR 1860.0083
GLU 1870.0098
ARG 1880.0115
HIS 1890.0126
ASN 1900.0120
SER 1910.0074
TYR 1920.0101
THR 1930.0131
CYS 1940.0136
GLU 1950.0217
ALA 1960.0240
THR 1970.0326
HIS 1980.0190
LYS 1990.0258
THR 2000.0337
SER 2010.0223
THR 2020.0271
SER 2030.0602
PRO 2040.0494
ILE 2050.0328
VAL 2060.0261
LYS 2070.0181
SER 2080.0176
PHE 2090.0096
ASN 2100.0080
ARG 2110.0047
ASN 2120.0040
GLU 2130.0029
CYS 2140.0063

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.