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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 62  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1184
ILE 4210.0222
PHE 4220.0141
ILE 4230.0083
SER 4240.0121
ASN 4250.0105
ASP 4260.0105
LYS 4270.0057
GLU 4280.0070
SER 4290.0101
ILE 4300.0059
LYS 4310.0078
CYS 4320.0091
PRO 4330.0088
CYS 4340.0076
GLU 4350.0072
PRO 4360.0065
GLU 4370.0059
ARG 4380.0066
ILE 4390.0099
SER 4400.0095
GLU 4410.0101
SER 4420.0140
THR 4430.0146
CYS 4440.0148
ASN 4450.0079
PHE 4460.0096
TYR 4470.0101
VAL 4480.0029
CYS 4490.0059
ASN 4500.0074
CYS 4510.0096
VAL 4520.0124
GLU 4530.0130
LYS 4540.0248
GLU 10.0586
VAL 20.0336
GLN 30.0279
LEU 40.0085
VAL 50.0088
GLU 60.0077
SER 70.0090
GLY 80.0107
GLY 90.0115
GLY 100.0127
LEU 110.0073
VAL 120.0069
LYS 130.0136
PRO 140.0100
GLY 150.0071
GLY 160.0052
SER 170.0081
LEU 180.0126
LYS 190.0096
LEU 200.0084
SER 210.0073
CYS 220.0086
ALA 230.0081
ALA 240.0091
SER 250.0115
GLY 260.0123
PHE 270.0115
ILE 280.0126
PHE 290.0097
SER 300.0068
ASP 310.0057
TYR 320.0066
TYR 330.0072
MET 340.0043
TYR 350.0045
TRP 360.0042
VAL 370.0039
ARG 380.0055
GLN 390.0047
THR 400.0086
PRO 410.0054
GLU 420.0134
LYS 430.0074
ARG 440.0081
LEU 450.0063
GLU 460.0037
TRP 470.0015
VAL 480.0025
ALA 490.0019
THR 500.0033
ILE 510.0042
SER 520.0043
ASP 520.0055
GLY 530.0069
ASN 540.0095
SER 550.0082
TYR 560.0075
THR 570.0060
TYR 580.0053
TYR 590.0045
VAL 600.0075
ASP 610.0200
SER 620.0206
VAL 630.0111
LYS 640.0103
GLY 650.0071
ARG 660.0056
PHE 670.0069
THR 680.0050
ILE 690.0051
SER 700.0126
ARG 710.0084
ASP 720.0169
ASN 730.0211
ALA 740.0363
LYS 750.0358
ASN 760.0139
ASN 770.0094
LEU 780.0046
TYR 790.0072
LEU 800.0075
GLN 810.0088
MET 820.0096
SER 820.0065
SER 820.0050
LEU 820.0064
LYS 830.0089
SER 840.0114
GLU 850.0123
ASP 860.0115
THR 870.0123
ALA 880.0076
ILE 890.0072
TYR 900.0068
TYR 910.0025
CYS 920.0028
ALA 930.0036
ARG 940.0055
ASP 950.0061
GLY 960.0065
PRO 970.0107
THR 980.0171
ASP 990.0173
SER 1000.0070
SER 1000.0068
GLY 1000.0068
TYR 1000.0048
GLY 1000.0044
GLY 1000.0035
PHE 1000.0036
GLY 1010.0050
TYR 1020.0053
TRP 1030.0024
GLY 1040.0023
GLN 1050.0016
GLY 1060.0055
THR 1070.0070
LEU 1080.0079
VAL 1090.0123
THR 1100.0100
VAL 1110.0071
SER 1120.0130
GLU 1130.0232
ALA 1140.0088
LYS 1150.0195
THR 1160.0156
THR 1170.0123
PRO 1180.0072
PRO 1190.0086
SER 1200.0105
VAL 1210.0109
TYR 1220.0105
PRO 1230.0089
LEU 1240.0041
ALA 1250.0040
PRO 1260.0043
GLY 1270.0278
SER 1280.0257
ALA 1290.1184
ALA 1300.0593
GLN 1330.0726
THR 1340.0457
ASN 1350.0220
SER 1360.0136
MET 1370.0158
VAL 1380.0237
THR 1390.0108
LEU 1400.0074
GLY 1410.0068
CYS 1420.0059
LEU 1430.0076
VAL 1440.0086
LYS 1450.0099
GLY 1460.0094
TYR 1470.0082
PHE 1480.0079
PRO 1490.0085
GLU 1500.0068
PRO 1510.0076
VAL 1520.0040
THR 1530.0060
VAL 1540.0031
THR 1560.0053
TRP 1570.0060
ASN 1620.0117
SER 1630.0121
GLY 1640.0124
SER 1650.0150
LEU 1660.0136
SER 1670.0122
SER 1680.0220
GLY 1690.0180
VAL 1710.0059
HIS 1720.0045
THR 1730.0035
PHE 1740.0073
PRO 1750.0108
ALA 1760.0104
VAL 1770.0164
LEU 1780.0118
GLN 1790.0157
SER 1800.0240
ASP 1830.0096
LEU 1840.0088
TYR 1850.0071
THR 1860.0087
LEU 1870.0075
SER 1880.0066
SER 1890.0043
SER 1900.0054
VAL 1910.0074
THR 1920.0207
VAL 1930.0230
PRO 1940.0228
SER 1950.0287
SER 1960.0367
PRO 1980.0233
ARG 1990.0212
PRO 2000.0248
SER 2020.0450
GLU 2030.0343
THR 2040.0246
VAL 2050.0090
THR 2060.0059
CYS 2080.0024
ASN 2090.0057
VAL 2100.0048
ALA 2110.0094
HIS 2120.0057
PRO 2130.0098
ALA 2140.0122
SER 2150.0046
SER 2160.0055
THR 2170.0109
LYS 2180.0173
VAL 2190.0146
ASP 2200.0032
LYS 2210.0051
LYS 2220.0084
ILE 2230.0091
VAL 2260.0078
PRO 2270.0069
ARG 2280.0098
ASP 2320.0197
CYS 2330.0245
SER 20.0073
VAL 30.0033
LEU 40.0028
SER 50.0047
GLN 60.0023
SER 70.0032
PRO 80.0044
ALA 90.0055
ILE 100.0059
LEU 110.0083
SER 120.0114
ALA 130.0122
SER 140.0193
PRO 150.0168
GLY 160.0126
GLU 170.0072
LYS 180.0068
VAL 190.0108
THR 200.0087
MET 210.0061
THR 220.0048
CYS 230.0060
ARG 240.0117
ALA 250.0134
ARG 260.0230
SER 270.0179
SER 290.0243
VAL 300.0177
SER 310.0173
TYR 320.0075
MET 330.0060
HIS 340.0057
TRP 350.0038
TYR 360.0037
GLN 370.0034
GLN 380.0040
LYS 390.0055
SER 400.0075
GLY 410.0074
SER 420.0051
SER 430.0024
PRO 440.0034
LYS 450.0042
PRO 460.0052
TRP 470.0060
ILE 480.0054
HIS 490.0057
ALA 500.0078
THR 510.0050
SER 520.0050
ASN 530.0059
LEU 540.0080
ALA 550.0095
SER 560.0192
GLY 570.0171
VAL 580.0127
PRO 590.0148
ALA 600.0179
ARG 610.0138
PHE 620.0101
SER 630.0095
GLY 640.0071
SER 650.0042
GLY 660.0134
SER 670.0232
GLY 680.0263
THR 690.0224
SER 700.0198
TYR 710.0092
SER 720.0068
LEU 730.0060
THR 740.0119
ILE 750.0092
SER 760.0123
ARG 770.0047
VAL 780.0045
GLU 790.0117
ALA 800.0147
GLU 810.0119
ASP 820.0065
ALA 830.0063
ALA 840.0043
THR 850.0041
TYR 860.0031
TYR 870.0040
CYS 880.0046
GLN 890.0047
GLN 900.0052
TRP 910.0060
SER 920.0102
SER 930.0099
HIS 940.0091
PRO 950.0049
PRO 960.0034
THR 970.0042
PHE 980.0033
GLY 990.0028
SER 1000.0025
GLY 1010.0031
THR 1020.0030
LYS 1030.0038
LEU 1040.0070
GLU 1050.0088
ILE 1060.0112
LYS 1070.0120
ARG 1080.0098
ALA 1090.0083
ASP 1100.0138
ALA 1110.0147
ALA 1120.0173
PRO 1130.0136
THR 1140.0150
VAL 1150.0104
SER 1160.0075
ILE 1170.0111
PHE 1180.0130
PRO 1190.0106
PRO 1200.0115
SER 1210.0142
SER 1220.0143
GLU 1230.0151
GLN 1240.0111
LEU 1250.0118
THR 1260.0215
SER 1270.0140
GLY 1280.0132
GLY 1290.0088
ALA 1300.0115
SER 1310.0197
VAL 1320.0187
VAL 1330.0179
CYS 1340.0103
PHE 1350.0074
LEU 1360.0055
ASN 1370.0068
ASN 1380.0083
PHE 1390.0084
TYR 1400.0071
PRO 1410.0064
LYS 1420.0055
ASP 1430.0093
ILE 1440.0099
ASN 1450.0118
VAL 1460.0045
LYS 1470.0080
TRP 1480.0124
LYS 1490.0122
ILE 1500.0208
ASP 1510.0191
GLY 1520.0124
SER 1530.0097
GLU 1540.0267
ARG 1550.0169
GLN 1560.0246
ASN 1570.0315
GLY 1580.0269
VAL 1590.0272
LEU 1600.0282
ASN 1610.0149
SER 1620.0131
TRP 1630.0100
THR 1640.0035
ASP 1650.0041
GLN 1660.0044
ASP 1670.0058
SER 1680.0122
LYS 1690.0327
ASP 1700.0133
SER 1710.0081
THR 1720.0038
TYR 1730.0040
SER 1740.0044
MET 1750.0042
SER 1760.0142
SER 1770.0156
THR 1780.0213
LEU 1790.0302
THR 1800.0258
LEU 1810.0216
THR 1820.0325
LYS 1830.0194
ASP 1840.0386
GLU 1850.0251
TYR 1860.0118
GLU 1870.0106
ARG 1880.0127
HIS 1890.0110
ASN 1900.0180
SER 1910.0174
TYR 1920.0162
THR 1930.0139
CYS 1940.0052
GLU 1950.0070
ALA 1960.0120
THR 1970.0191
HIS 1980.0177
LYS 1990.0166
THR 2000.0113
SER 2010.0247
THR 2020.0658
SER 2030.0257
PRO 2040.0231
ILE 2050.0218
VAL 2060.0147
LYS 2070.0125
SER 2080.0135
PHE 2090.0182
ASN 2100.0173
ARG 2110.0131
ASN 2120.0261
GLU 2130.0216
CYS 2140.0284

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.