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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 63  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0681
ILE 4210.0529
PHE 4220.0425
ILE 4230.0184
SER 4240.0142
ASN 4250.0087
ASP 4260.0180
LYS 4270.0147
GLU 4280.0192
SER 4290.0192
ILE 4300.0128
LYS 4310.0203
CYS 4320.0125
PRO 4330.0139
CYS 4340.0114
GLU 4350.0083
PRO 4360.0018
GLU 4370.0105
ARG 4380.0158
ILE 4390.0216
SER 4400.0158
GLU 4410.0147
SER 4420.0443
THR 4430.0281
CYS 4440.0412
ASN 4450.0119
PHE 4460.0097
TYR 4470.0085
VAL 4480.0021
CYS 4490.0088
ASN 4500.0160
CYS 4510.0129
VAL 4520.0199
GLU 4530.0272
LYS 4540.0681
GLU 10.0168
VAL 20.0052
GLN 30.0121
LEU 40.0056
VAL 50.0072
GLU 60.0082
SER 70.0079
GLY 80.0056
GLY 90.0038
GLY 100.0058
LEU 110.0078
VAL 120.0089
LYS 130.0149
PRO 140.0144
GLY 150.0151
GLY 160.0099
SER 170.0079
LEU 180.0051
LYS 190.0044
LEU 200.0067
SER 210.0076
CYS 220.0089
ALA 230.0092
ALA 240.0079
SER 250.0082
GLY 260.0041
PHE 270.0084
ILE 280.0139
PHE 290.0075
SER 300.0102
ASP 310.0131
TYR 320.0093
TYR 330.0057
MET 340.0072
TYR 350.0087
TRP 360.0089
VAL 370.0072
ARG 380.0074
GLN 390.0067
THR 400.0077
PRO 410.0280
GLU 420.0320
LYS 430.0132
ARG 440.0085
LEU 450.0021
GLU 460.0019
TRP 470.0035
VAL 480.0042
ALA 490.0073
THR 500.0068
ILE 510.0075
SER 520.0067
ASP 520.0166
GLY 530.0257
ASN 540.0336
SER 550.0271
TYR 560.0219
THR 570.0145
TYR 580.0082
TYR 590.0038
VAL 600.0025
ASP 610.0292
SER 620.0266
VAL 630.0159
LYS 640.0212
GLY 650.0198
ARG 660.0126
PHE 670.0077
THR 680.0068
ILE 690.0063
SER 700.0056
ARG 710.0022
ASP 720.0071
ASN 730.0113
ALA 740.0209
LYS 750.0218
ASN 760.0080
ASN 770.0079
LEU 780.0063
TYR 790.0048
LEU 800.0058
GLN 810.0027
MET 820.0050
SER 820.0050
SER 820.0043
LEU 820.0021
LYS 830.0034
SER 840.0061
GLU 850.0101
ASP 860.0087
THR 870.0086
ALA 880.0087
ILE 890.0084
TYR 900.0087
TYR 910.0096
CYS 920.0087
ALA 930.0079
ARG 940.0106
ASP 950.0148
GLY 960.0178
PRO 970.0231
THR 980.0353
ASP 990.0400
SER 1000.0217
SER 1000.0214
GLY 1000.0233
TYR 1000.0241
GLY 1000.0216
GLY 1000.0186
PHE 1000.0147
GLY 1010.0142
TYR 1020.0104
TRP 1030.0051
GLY 1040.0042
GLN 1050.0072
GLY 1060.0096
THR 1070.0070
LEU 1080.0040
VAL 1090.0039
THR 1100.0027
VAL 1110.0059
SER 1120.0177
GLU 1130.0168
ALA 1140.0164
LYS 1150.0244
THR 1160.0210
THR 1170.0191
PRO 1180.0151
PRO 1190.0093
SER 1200.0101
VAL 1210.0044
TYR 1220.0044
PRO 1230.0048
LEU 1240.0045
ALA 1250.0042
PRO 1260.0034
GLY 1270.0102
SER 1280.0122
ALA 1290.0298
ALA 1300.0115
GLN 1330.0093
THR 1340.0052
ASN 1350.0098
SER 1360.0056
MET 1370.0036
VAL 1380.0038
THR 1390.0013
LEU 1400.0014
GLY 1410.0028
CYS 1420.0048
LEU 1430.0048
VAL 1440.0048
LYS 1450.0075
GLY 1460.0082
TYR 1470.0100
PHE 1480.0141
PRO 1490.0136
GLU 1500.0092
PRO 1510.0076
VAL 1520.0072
THR 1530.0138
VAL 1540.0078
THR 1560.0037
TRP 1570.0012
ASN 1620.0088
SER 1630.0115
GLY 1640.0117
SER 1650.0170
LEU 1660.0128
SER 1670.0145
SER 1680.0190
GLY 1690.0146
VAL 1710.0061
HIS 1720.0058
THR 1730.0047
PHE 1740.0016
PRO 1750.0018
ALA 1760.0012
VAL 1770.0083
LEU 1780.0081
GLN 1790.0160
SER 1800.0173
ASP 1830.0137
LEU 1840.0116
TYR 1850.0066
THR 1860.0051
LEU 1870.0038
SER 1880.0037
SER 1890.0035
SER 1900.0035
VAL 1910.0031
THR 1920.0038
VAL 1930.0032
PRO 1940.0060
SER 1950.0072
SER 1960.0087
PRO 1980.0024
ARG 1990.0043
PRO 2000.0101
SER 2020.0204
GLU 2030.0182
THR 2040.0098
VAL 2050.0021
THR 2060.0036
CYS 2080.0076
ASN 2090.0090
VAL 2100.0111
ALA 2110.0142
HIS 2120.0090
PRO 2130.0104
ALA 2140.0115
SER 2150.0181
SER 2160.0199
THR 2170.0138
LYS 2180.0184
VAL 2190.0146
ASP 2200.0063
LYS 2210.0052
LYS 2220.0045
ILE 2230.0016
VAL 2260.0068
PRO 2270.0088
ARG 2280.0107
ASP 2320.0251
CYS 2330.0065
SER 20.0184
VAL 30.0214
LEU 40.0176
SER 50.0037
GLN 60.0042
SER 70.0097
PRO 80.0147
ALA 90.0118
ILE 100.0100
LEU 110.0121
SER 120.0095
ALA 130.0116
SER 140.0296
PRO 150.0347
GLY 160.0384
GLU 170.0203
LYS 180.0087
VAL 190.0202
THR 200.0237
MET 210.0179
THR 220.0129
CYS 230.0067
ARG 240.0089
ALA 250.0136
ARG 260.0284
SER 270.0303
SER 290.0224
VAL 300.0142
SER 310.0111
TYR 320.0193
MET 330.0164
HIS 340.0162
TRP 350.0076
TYR 360.0057
GLN 370.0061
GLN 380.0089
LYS 390.0182
SER 400.0273
GLY 410.0557
SER 420.0327
SER 430.0131
PRO 440.0074
LYS 450.0057
PRO 460.0081
TRP 470.0068
ILE 480.0091
HIS 490.0166
ALA 500.0201
THR 510.0141
SER 520.0138
ASN 530.0139
LEU 540.0116
ALA 550.0147
SER 560.0208
GLY 570.0224
VAL 580.0159
PRO 590.0243
ALA 600.0283
ARG 610.0279
PHE 620.0215
SER 630.0208
GLY 640.0191
SER 650.0137
GLY 660.0147
SER 670.0167
GLY 680.0210
THR 690.0198
SER 700.0186
TYR 710.0119
SER 720.0136
LEU 730.0158
THR 740.0288
ILE 750.0240
SER 760.0225
ARG 770.0276
VAL 780.0175
GLU 790.0284
ALA 800.0164
GLU 810.0193
ASP 820.0166
ALA 830.0127
ALA 840.0110
THR 850.0097
TYR 860.0059
TYR 870.0042
CYS 880.0058
GLN 890.0191
GLN 900.0177
TRP 910.0170
SER 920.0163
SER 930.0207
HIS 940.0225
PRO 950.0192
PRO 960.0190
THR 970.0237
PHE 980.0094
GLY 990.0057
SER 1000.0037
GLY 1010.0060
THR 1020.0092
LYS 1030.0094
LEU 1040.0092
GLU 1050.0067
ILE 1060.0094
LYS 1070.0105
ARG 1080.0053
ALA 1090.0032
ASP 1100.0138
ALA 1110.0109
ALA 1120.0101
PRO 1130.0025
THR 1140.0022
VAL 1150.0039
SER 1160.0061
ILE 1170.0085
PHE 1180.0099
PRO 1190.0107
PRO 1200.0081
SER 1210.0059
SER 1220.0079
GLU 1230.0060
GLN 1240.0052
LEU 1250.0086
THR 1260.0200
SER 1270.0223
GLY 1280.0139
GLY 1290.0082
ALA 1300.0070
SER 1310.0106
VAL 1320.0107
VAL 1330.0108
CYS 1340.0060
PHE 1350.0032
LEU 1360.0010
ASN 1370.0022
ASN 1380.0034
PHE 1390.0021
TYR 1400.0031
PRO 1410.0066
LYS 1420.0083
ASP 1430.0107
ILE 1440.0054
ASN 1450.0119
VAL 1460.0068
LYS 1470.0054
TRP 1480.0026
LYS 1490.0047
ILE 1500.0073
ASP 1510.0094
GLY 1520.0160
SER 1530.0145
GLU 1540.0159
ARG 1550.0036
GLN 1560.0094
ASN 1570.0152
GLY 1580.0167
VAL 1590.0135
LEU 1600.0133
ASN 1610.0089
SER 1620.0051
TRP 1630.0048
THR 1640.0071
ASP 1650.0071
GLN 1660.0085
ASP 1670.0157
SER 1680.0127
LYS 1690.0152
ASP 1700.0096
SER 1710.0063
THR 1720.0058
TYR 1730.0055
SER 1740.0036
MET 1750.0021
SER 1760.0042
SER 1770.0076
THR 1780.0114
LEU 1790.0143
THR 1800.0126
LEU 1810.0090
THR 1820.0096
LYS 1830.0056
ASP 1840.0083
GLU 1850.0051
TYR 1860.0012
GLU 1870.0045
ARG 1880.0078
HIS 1890.0049
ASN 1900.0078
SER 1910.0067
TYR 1920.0062
THR 1930.0053
CYS 1940.0012
GLU 1950.0080
ALA 1960.0101
THR 1970.0149
HIS 1980.0063
LYS 1990.0140
THR 2000.0171
SER 2010.0087
THR 2020.0081
SER 2030.0347
PRO 2040.0260
ILE 2050.0167
VAL 2060.0112
LYS 2070.0092
SER 2080.0102
PHE 2090.0115
ASN 2100.0102
ARG 2110.0083
ASN 2120.0093
GLU 2130.0093
CYS 2140.0064

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.