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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 64  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0763
ILE 4210.0120
PHE 4220.0065
ILE 4230.0063
SER 4240.0078
ASN 4250.0072
ASP 4260.0089
LYS 4270.0052
GLU 4280.0061
SER 4290.0073
ILE 4300.0046
LYS 4310.0037
CYS 4320.0051
PRO 4330.0034
CYS 4340.0026
GLU 4350.0027
PRO 4360.0061
GLU 4370.0058
ARG 4380.0068
ILE 4390.0060
SER 4400.0050
GLU 4410.0042
SER 4420.0102
THR 4430.0105
CYS 4440.0109
ASN 4450.0053
PHE 4460.0051
TYR 4470.0057
VAL 4480.0026
CYS 4490.0047
ASN 4500.0062
CYS 4510.0045
VAL 4520.0057
GLU 4530.0056
LYS 4540.0242
GLU 10.0232
VAL 20.0130
GLN 30.0025
LEU 40.0087
VAL 50.0103
GLU 60.0134
SER 70.0144
GLY 80.0103
GLY 90.0094
GLY 100.0103
LEU 110.0108
VAL 120.0094
LYS 130.0148
PRO 140.0139
GLY 150.0166
GLY 160.0180
SER 170.0111
LEU 180.0042
LYS 190.0049
LEU 200.0088
SER 210.0115
CYS 220.0137
ALA 230.0126
ALA 240.0119
SER 250.0048
GLY 260.0042
PHE 270.0077
ILE 280.0053
PHE 290.0055
SER 300.0012
ASP 310.0015
TYR 320.0015
TYR 330.0008
MET 340.0065
TYR 350.0084
TRP 360.0106
VAL 370.0115
ARG 380.0093
GLN 390.0099
THR 400.0103
PRO 410.0155
GLU 420.0147
LYS 430.0115
ARG 440.0109
LEU 450.0109
GLU 460.0076
TRP 470.0094
VAL 480.0098
ALA 490.0110
THR 500.0090
ILE 510.0076
SER 520.0043
ASP 520.0053
GLY 530.0067
ASN 540.0067
SER 550.0076
TYR 560.0075
THR 570.0106
TYR 580.0126
TYR 590.0144
VAL 600.0144
ASP 610.0234
SER 620.0186
VAL 630.0157
LYS 640.0250
GLY 650.0275
ARG 660.0214
PHE 670.0116
THR 680.0131
ILE 690.0140
SER 700.0085
ARG 710.0025
ASP 720.0094
ASN 730.0151
ALA 740.0275
LYS 750.0293
ASN 760.0128
ASN 770.0106
LEU 780.0095
TYR 790.0100
LEU 800.0103
GLN 810.0071
MET 820.0078
SER 820.0142
SER 820.0210
LEU 820.0144
LYS 830.0164
SER 840.0165
GLU 850.0104
ASP 860.0041
THR 870.0106
ALA 880.0085
ILE 890.0121
TYR 900.0119
TYR 910.0120
CYS 920.0123
ALA 930.0113
ARG 940.0076
ASP 950.0085
GLY 960.0070
PRO 970.0148
THR 980.0229
ASP 990.0244
SER 1000.0114
SER 1000.0126
GLY 1000.0148
TYR 1000.0130
GLY 1000.0120
GLY 1000.0085
PHE 1000.0069
GLY 1010.0061
TYR 1020.0045
TRP 1030.0089
GLY 1040.0094
GLN 1050.0091
GLY 1060.0154
THR 1070.0135
LEU 1080.0114
VAL 1090.0113
THR 1100.0127
VAL 1110.0113
SER 1120.0124
GLU 1130.0139
ALA 1140.0127
LYS 1150.0125
THR 1160.0106
THR 1170.0094
PRO 1180.0118
PRO 1190.0130
SER 1200.0134
VAL 1210.0157
TYR 1220.0125
PRO 1230.0081
LEU 1240.0090
ALA 1250.0122
PRO 1260.0127
GLY 1270.0174
SER 1280.0204
ALA 1290.0445
ALA 1300.0240
GLN 1330.0280
THR 1340.0150
ASN 1350.0402
SER 1360.0316
MET 1370.0234
VAL 1380.0176
THR 1390.0088
LEU 1400.0091
GLY 1410.0101
CYS 1420.0048
LEU 1430.0059
VAL 1440.0067
LYS 1450.0092
GLY 1460.0097
TYR 1470.0101
PHE 1480.0086
PRO 1490.0086
GLU 1500.0070
PRO 1510.0119
VAL 1520.0120
THR 1530.0156
VAL 1540.0082
THR 1560.0068
TRP 1570.0077
ASN 1620.0136
SER 1630.0130
GLY 1640.0107
SER 1650.0150
LEU 1660.0147
SER 1670.0160
SER 1680.0232
GLY 1690.0161
VAL 1710.0121
HIS 1720.0118
THR 1730.0105
PHE 1740.0106
PRO 1750.0111
ALA 1760.0100
VAL 1770.0138
LEU 1780.0117
GLN 1790.0169
SER 1800.0281
ASP 1830.0130
LEU 1840.0122
TYR 1850.0083
THR 1860.0079
LEU 1870.0065
SER 1880.0067
SER 1890.0050
SER 1900.0068
VAL 1910.0080
THR 1920.0117
VAL 1930.0053
PRO 1940.0067
SER 1950.0127
SER 1960.0144
PRO 1980.0066
ARG 1990.0091
PRO 2000.0149
SER 2020.0182
GLU 2030.0188
THR 2040.0187
VAL 2050.0099
THR 2060.0100
CYS 2080.0095
ASN 2090.0080
VAL 2100.0115
ALA 2110.0196
HIS 2120.0160
PRO 2130.0182
ALA 2140.0150
SER 2150.0175
SER 2160.0234
THR 2170.0154
LYS 2180.0180
VAL 2190.0151
ASP 2200.0060
LYS 2210.0090
LYS 2220.0095
ILE 2230.0087
VAL 2260.0207
PRO 2270.0249
ARG 2280.0231
ASP 2320.0577
CYS 2330.0358
SER 20.0037
VAL 30.0054
LEU 40.0089
SER 50.0086
GLN 60.0067
SER 70.0119
PRO 80.0113
ALA 90.0115
ILE 100.0084
LEU 110.0136
SER 120.0125
ALA 130.0085
SER 140.0216
PRO 150.0196
GLY 160.0247
GLU 170.0183
LYS 180.0066
VAL 190.0102
THR 200.0160
MET 210.0122
THR 220.0103
CYS 230.0045
ARG 240.0084
ALA 250.0132
ARG 260.0254
SER 270.0132
SER 290.0167
VAL 300.0127
SER 310.0108
TYR 320.0098
MET 330.0076
HIS 340.0075
TRP 350.0036
TYR 360.0034
GLN 370.0017
GLN 380.0026
LYS 390.0033
SER 400.0072
GLY 410.0117
SER 420.0098
SER 430.0088
PRO 440.0057
LYS 450.0056
PRO 460.0078
TRP 470.0048
ILE 480.0058
HIS 490.0096
ALA 500.0116
THR 510.0062
SER 520.0086
ASN 530.0105
LEU 540.0103
ALA 550.0119
SER 560.0175
GLY 570.0153
VAL 580.0098
PRO 590.0050
ALA 600.0090
ARG 610.0141
PHE 620.0110
SER 630.0108
GLY 640.0098
SER 650.0063
GLY 660.0041
SER 670.0092
GLY 680.0142
THR 690.0140
SER 700.0105
TYR 710.0063
SER 720.0086
LEU 730.0104
THR 740.0193
ILE 750.0139
SER 760.0154
ARG 770.0229
VAL 780.0048
GLU 790.0064
ALA 800.0057
GLU 810.0091
ASP 820.0099
ALA 830.0095
ALA 840.0068
THR 850.0042
TYR 860.0021
TYR 870.0034
CYS 880.0053
GLN 890.0092
GLN 900.0082
TRP 910.0066
SER 920.0088
SER 930.0068
HIS 940.0042
PRO 950.0027
PRO 960.0059
THR 970.0078
PHE 980.0086
GLY 990.0080
SER 1000.0082
GLY 1010.0065
THR 1020.0057
LYS 1030.0068
LEU 1040.0092
GLU 1050.0094
ILE 1060.0068
LYS 1070.0139
ARG 1080.0095
ALA 1090.0085
ASP 1100.0086
ALA 1110.0088
ALA 1120.0082
PRO 1130.0068
THR 1140.0050
VAL 1150.0075
SER 1160.0101
ILE 1170.0126
PHE 1180.0137
PRO 1190.0178
PRO 1200.0116
SER 1210.0084
SER 1220.0260
GLU 1230.0265
GLN 1240.0213
LEU 1250.0369
THR 1260.0748
SER 1270.0763
GLY 1280.0358
GLY 1290.0179
ALA 1300.0112
SER 1310.0137
VAL 1320.0148
VAL 1330.0141
CYS 1340.0097
PHE 1350.0070
LEU 1360.0063
ASN 1370.0100
ASN 1380.0100
PHE 1390.0094
TYR 1400.0036
PRO 1410.0026
LYS 1420.0039
ASP 1430.0032
ILE 1440.0063
ASN 1450.0109
VAL 1460.0175
LYS 1470.0132
TRP 1480.0069
LYS 1490.0150
ILE 1500.0163
ASP 1510.0252
GLY 1520.0493
SER 1530.0523
GLU 1540.0665
ARG 1550.0300
GLN 1560.0102
ASN 1570.0334
GLY 1580.0323
VAL 1590.0264
LEU 1600.0246
ASN 1610.0203
SER 1620.0163
TRP 1630.0180
THR 1640.0118
ASP 1650.0081
GLN 1660.0097
ASP 1670.0087
SER 1680.0148
LYS 1690.0373
ASP 1700.0157
SER 1710.0121
THR 1720.0134
TYR 1730.0115
SER 1740.0110
MET 1750.0112
SER 1760.0096
SER 1770.0132
THR 1780.0162
LEU 1790.0172
THR 1800.0165
LEU 1810.0157
THR 1820.0099
LYS 1830.0185
ASP 1840.0251
GLU 1850.0124
TYR 1860.0101
GLU 1870.0082
ARG 1880.0116
HIS 1890.0114
ASN 1900.0177
SER 1910.0138
TYR 1920.0074
THR 1930.0067
CYS 1940.0060
GLU 1950.0091
ALA 1960.0137
THR 1970.0096
HIS 1980.0060
LYS 1990.0057
THR 2000.0115
SER 2010.0085
THR 2020.0121
SER 2030.0179
PRO 2040.0132
ILE 2050.0044
VAL 2060.0038
LYS 2070.0083
SER 2080.0128
PHE 2090.0172
ASN 2100.0185
ARG 2110.0188
ASN 2120.0222
GLU 2130.0231
CYS 2140.0243

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.