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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 65  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0911
ILE 4210.0222
PHE 4220.0114
ILE 4230.0116
SER 4240.0169
ASN 4250.0156
ASP 4260.0223
LYS 4270.0131
GLU 4280.0152
SER 4290.0148
ILE 4300.0106
LYS 4310.0117
CYS 4320.0117
PRO 4330.0105
CYS 4340.0074
GLU 4350.0041
PRO 4360.0074
GLU 4370.0073
ARG 4380.0089
ILE 4390.0154
SER 4400.0116
GLU 4410.0105
SER 4420.0426
THR 4430.0168
CYS 4440.0376
ASN 4450.0081
PHE 4460.0058
TYR 4470.0053
VAL 4480.0026
CYS 4490.0045
ASN 4500.0062
CYS 4510.0122
VAL 4520.0200
GLU 4530.0217
LYS 4540.0446
GLU 10.0234
VAL 20.0131
GLN 30.0071
LEU 40.0034
VAL 50.0039
GLU 60.0061
SER 70.0154
GLY 80.0141
GLY 90.0141
GLY 100.0182
LEU 110.0165
VAL 120.0146
LYS 130.0163
PRO 140.0226
GLY 150.0157
GLY 160.0110
SER 170.0058
LEU 180.0089
LYS 190.0081
LEU 200.0073
SER 210.0077
CYS 220.0067
ALA 230.0055
ALA 240.0032
SER 250.0069
GLY 260.0093
PHE 270.0082
ILE 280.0092
PHE 290.0073
SER 300.0086
ASP 310.0065
TYR 320.0042
TYR 330.0037
MET 340.0045
TYR 350.0047
TRP 360.0062
VAL 370.0077
ARG 380.0066
GLN 390.0068
THR 400.0093
PRO 410.0240
GLU 420.0179
LYS 430.0046
ARG 440.0085
LEU 450.0091
GLU 460.0068
TRP 470.0069
VAL 480.0067
ALA 490.0075
THR 500.0058
ILE 510.0052
SER 520.0068
ASP 520.0083
GLY 530.0109
ASN 540.0106
SER 550.0099
TYR 560.0097
THR 570.0118
TYR 580.0080
TYR 590.0083
VAL 600.0108
ASP 610.0176
SER 620.0135
VAL 630.0089
LYS 640.0115
GLY 650.0115
ARG 660.0068
PHE 670.0061
THR 680.0074
ILE 690.0081
SER 700.0071
ARG 710.0023
ASP 720.0086
ASN 730.0202
ALA 740.0292
LYS 750.0265
ASN 760.0110
ASN 770.0073
LEU 780.0036
TYR 790.0058
LEU 800.0079
GLN 810.0080
MET 820.0069
SER 820.0034
SER 820.0091
LEU 820.0112
LYS 830.0164
SER 840.0230
GLU 850.0173
ASP 860.0138
THR 870.0192
ALA 880.0105
ILE 890.0111
TYR 900.0107
TYR 910.0087
CYS 920.0072
ALA 930.0067
ARG 940.0010
ASP 950.0024
GLY 960.0029
PRO 970.0077
THR 980.0117
ASP 990.0132
SER 1000.0046
SER 1000.0028
GLY 1000.0020
TYR 1000.0023
GLY 1000.0030
GLY 1000.0024
PHE 1000.0018
GLY 1010.0028
TYR 1020.0033
TRP 1030.0056
GLY 1040.0051
GLN 1050.0051
GLY 1060.0131
THR 1070.0129
LEU 1080.0135
VAL 1090.0217
THR 1100.0222
VAL 1110.0196
SER 1120.0308
GLU 1130.0308
ALA 1140.0186
LYS 1150.0101
THR 1160.0075
THR 1170.0025
PRO 1180.0034
PRO 1190.0043
SER 1200.0055
VAL 1210.0016
TYR 1220.0027
PRO 1230.0039
LEU 1240.0030
ALA 1250.0031
PRO 1260.0047
GLY 1270.0136
SER 1280.0197
ALA 1290.0531
ALA 1300.0162
GLN 1330.0167
THR 1340.0189
ASN 1350.0217
SER 1360.0229
MET 1370.0230
VAL 1380.0212
THR 1390.0128
LEU 1400.0125
GLY 1410.0128
CYS 1420.0058
LEU 1430.0046
VAL 1440.0069
LYS 1450.0070
GLY 1460.0060
TYR 1470.0056
PHE 1480.0045
PRO 1490.0054
GLU 1500.0065
PRO 1510.0090
VAL 1520.0064
THR 1530.0075
VAL 1540.0064
THR 1560.0062
TRP 1570.0048
ASN 1620.0175
SER 1630.0228
GLY 1640.0225
SER 1650.0312
LEU 1660.0225
SER 1670.0195
SER 1680.0377
GLY 1690.0340
VAL 1710.0198
HIS 1720.0200
THR 1730.0199
PHE 1740.0167
PRO 1750.0171
ALA 1760.0195
VAL 1770.0197
LEU 1780.0178
GLN 1790.0148
SER 1800.0140
ASP 1830.0103
LEU 1840.0088
TYR 1850.0102
THR 1860.0135
LEU 1870.0125
SER 1880.0117
SER 1890.0159
SER 1900.0165
VAL 1910.0157
THR 1920.0190
VAL 1930.0174
PRO 1940.0184
SER 1950.0189
SER 1960.0148
PRO 1980.0089
ARG 1990.0085
PRO 2000.0069
SER 2020.0120
GLU 2030.0131
THR 2040.0122
VAL 2050.0070
THR 2060.0068
CYS 2080.0069
ASN 2090.0054
VAL 2100.0055
ALA 2110.0073
HIS 2120.0072
PRO 2130.0088
ALA 2140.0119
SER 2150.0078
SER 2160.0078
THR 2170.0041
LYS 2180.0043
VAL 2190.0049
ASP 2200.0044
LYS 2210.0053
LYS 2220.0089
ILE 2230.0089
VAL 2260.0087
PRO 2270.0152
ARG 2280.0212
ASP 2320.0533
CYS 2330.0260
SER 20.0094
VAL 30.0090
LEU 40.0091
SER 50.0097
GLN 60.0083
SER 70.0117
PRO 80.0140
ALA 90.0141
ILE 100.0091
LEU 110.0016
SER 120.0035
ALA 130.0047
SER 140.0097
PRO 150.0101
GLY 160.0158
GLU 170.0134
LYS 180.0100
VAL 190.0134
THR 200.0112
MET 210.0071
THR 220.0061
CYS 230.0053
ARG 240.0058
ALA 250.0105
ARG 260.0296
SER 270.0118
SER 290.0122
VAL 300.0095
SER 310.0082
TYR 320.0027
MET 330.0026
HIS 340.0019
TRP 350.0021
TYR 360.0017
GLN 370.0029
GLN 380.0104
LYS 390.0216
SER 400.0354
GLY 410.0911
SER 420.0556
SER 430.0196
PRO 440.0112
LYS 450.0086
PRO 460.0073
TRP 470.0092
ILE 480.0080
HIS 490.0062
ALA 500.0045
THR 510.0053
SER 520.0089
ASN 530.0092
LEU 540.0101
ALA 550.0105
SER 560.0409
GLY 570.0298
VAL 580.0152
PRO 590.0084
ALA 600.0107
ARG 610.0091
PHE 620.0120
SER 630.0125
GLY 640.0115
SER 650.0103
GLY 660.0030
SER 670.0050
GLY 680.0109
THR 690.0087
SER 700.0046
TYR 710.0040
SER 720.0064
LEU 730.0086
THR 740.0141
ILE 750.0098
SER 760.0083
ARG 770.0123
VAL 780.0090
GLU 790.0063
ALA 800.0086
GLU 810.0037
ASP 820.0038
ALA 830.0028
ALA 840.0041
THR 850.0067
TYR 860.0023
TYR 870.0047
CYS 880.0037
GLN 890.0059
GLN 900.0069
TRP 910.0073
SER 920.0102
SER 930.0142
HIS 940.0130
PRO 950.0114
PRO 960.0079
THR 970.0089
PHE 980.0067
GLY 990.0068
SER 1000.0069
GLY 1010.0087
THR 1020.0061
LYS 1030.0054
LEU 1040.0020
GLU 1050.0033
ILE 1060.0036
LYS 1070.0104
ARG 1080.0116
ALA 1090.0156
ASP 1100.0237
ALA 1110.0240
ALA 1120.0257
PRO 1130.0158
THR 1140.0168
VAL 1150.0132
SER 1160.0035
ILE 1170.0051
PHE 1180.0057
PRO 1190.0172
PRO 1200.0174
SER 1210.0154
SER 1220.0218
GLU 1230.0172
GLN 1240.0203
LEU 1250.0234
THR 1260.0221
SER 1270.0239
GLY 1280.0269
GLY 1290.0274
ALA 1300.0250
SER 1310.0119
VAL 1320.0120
VAL 1330.0111
CYS 1340.0032
PHE 1350.0066
LEU 1360.0071
ASN 1370.0171
ASN 1380.0172
PHE 1390.0155
TYR 1400.0177
PRO 1410.0171
LYS 1420.0152
ASP 1430.0149
ILE 1440.0130
ASN 1450.0104
VAL 1460.0061
LYS 1470.0057
TRP 1480.0060
LYS 1490.0031
ILE 1500.0067
ASP 1510.0039
GLY 1520.0449
SER 1530.0575
GLU 1540.0547
ARG 1550.0073
GLN 1560.0226
ASN 1570.0380
GLY 1580.0228
VAL 1590.0177
LEU 1600.0141
ASN 1610.0094
SER 1620.0111
TRP 1630.0120
THR 1640.0097
ASP 1650.0064
GLN 1660.0084
ASP 1670.0254
SER 1680.0230
LYS 1690.0474
ASP 1700.0074
SER 1710.0048
THR 1720.0128
TYR 1730.0124
SER 1740.0125
MET 1750.0100
SER 1760.0081
SER 1770.0070
THR 1780.0071
LEU 1790.0216
THR 1800.0215
LEU 1810.0221
THR 1820.0382
LYS 1830.0296
ASP 1840.0318
GLU 1850.0260
TYR 1860.0219
GLU 1870.0160
ARG 1880.0133
HIS 1890.0131
ASN 1900.0142
SER 1910.0110
TYR 1920.0149
THR 1930.0178
CYS 1940.0124
GLU 1950.0116
ALA 1960.0115
THR 1970.0189
HIS 1980.0208
LYS 1990.0225
THR 2000.0254
SER 2010.0227
THR 2020.0405
SER 2030.0214
PRO 2040.0209
ILE 2050.0169
VAL 2060.0114
LYS 2070.0108
SER 2080.0142
PHE 2090.0169
ASN 2100.0142
ARG 2110.0150
ASN 2120.0266
GLU 2130.0265
CYS 2140.0324

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.