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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 66  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1891
ILE 4210.0132
PHE 4220.0061
ILE 4230.0056
SER 4240.0082
ASN 4250.0066
ASP 4260.0093
LYS 4270.0064
GLU 4280.0074
SER 4290.0071
ILE 4300.0052
LYS 4310.0052
CYS 4320.0051
PRO 4330.0057
CYS 4340.0038
GLU 4350.0018
PRO 4360.0023
GLU 4370.0021
ARG 4380.0032
ILE 4390.0077
SER 4400.0058
GLU 4410.0056
SER 4420.0210
THR 4430.0077
CYS 4440.0181
ASN 4450.0045
PHE 4460.0039
TYR 4470.0026
VAL 4480.0011
CYS 4490.0017
ASN 4500.0030
CYS 4510.0071
VAL 4520.0096
GLU 4530.0096
LYS 4540.0188
GLU 10.0081
VAL 20.0047
GLN 30.0024
LEU 40.0043
VAL 50.0056
GLU 60.0033
SER 70.0097
GLY 80.0131
GLY 90.0132
GLY 100.0165
LEU 110.0126
VAL 120.0085
LYS 130.0079
PRO 140.0180
GLY 150.0175
GLY 160.0091
SER 170.0065
LEU 180.0070
LYS 190.0068
LEU 200.0063
SER 210.0060
CYS 220.0016
ALA 230.0030
ALA 240.0046
SER 250.0071
GLY 260.0073
PHE 270.0095
ILE 280.0097
PHE 290.0077
SER 300.0060
ASP 310.0058
TYR 320.0043
TYR 330.0020
MET 340.0014
TYR 350.0011
TRP 360.0011
VAL 370.0051
ARG 380.0052
GLN 390.0079
THR 400.0143
PRO 410.0423
GLU 420.0421
LYS 430.0082
ARG 440.0150
LEU 450.0166
GLU 460.0073
TRP 470.0059
VAL 480.0026
ALA 490.0029
THR 500.0032
ILE 510.0036
SER 520.0033
ASP 520.0041
GLY 530.0056
ASN 540.0048
SER 550.0037
TYR 560.0048
THR 570.0053
TYR 580.0049
TYR 590.0035
VAL 600.0043
ASP 610.0177
SER 620.0140
VAL 630.0068
LYS 640.0109
GLY 650.0090
ARG 660.0071
PHE 670.0056
THR 680.0056
ILE 690.0056
SER 700.0012
ARG 710.0019
ASP 720.0050
ASN 730.0067
ALA 740.0120
LYS 750.0138
ASN 760.0077
ASN 770.0047
LEU 780.0027
TYR 790.0041
LEU 800.0041
GLN 810.0037
MET 820.0070
SER 820.0076
SER 820.0122
LEU 820.0126
LYS 830.0175
SER 840.0199
GLU 850.0175
ASP 860.0128
THR 870.0148
ALA 880.0069
ILE 890.0051
TYR 900.0035
TYR 910.0062
CYS 920.0009
ALA 930.0030
ARG 940.0053
ASP 950.0045
GLY 960.0048
PRO 970.0120
THR 980.0139
ASP 990.0129
SER 1000.0055
SER 1000.0050
GLY 1000.0044
TYR 1000.0017
GLY 1000.0033
GLY 1000.0028
PHE 1000.0046
GLY 1010.0046
TYR 1020.0066
TRP 1030.0083
GLY 1040.0087
GLN 1050.0107
GLY 1060.0032
THR 1070.0066
LEU 1080.0103
VAL 1090.0166
THR 1100.0160
VAL 1110.0124
SER 1120.0173
GLU 1130.0149
ALA 1140.0058
LYS 1150.0047
THR 1160.0060
THR 1170.0068
PRO 1180.0051
PRO 1190.0031
SER 1200.0012
VAL 1210.0068
TYR 1220.0051
PRO 1230.0068
LEU 1240.0038
ALA 1250.0024
PRO 1260.0033
GLY 1270.0106
SER 1280.0085
ALA 1290.0110
ALA 1300.0105
GLN 1330.0187
THR 1340.0039
ASN 1350.0199
SER 1360.0138
MET 1370.0154
VAL 1380.0164
THR 1390.0097
LEU 1400.0096
GLY 1410.0106
CYS 1420.0070
LEU 1430.0036
VAL 1440.0032
LYS 1450.0036
GLY 1460.0038
TYR 1470.0033
PHE 1480.0050
PRO 1490.0053
GLU 1500.0053
PRO 1510.0064
VAL 1520.0033
THR 1530.0081
VAL 1540.0115
THR 1560.0083
TRP 1570.0039
ASN 1620.0126
SER 1630.0157
GLY 1640.0147
SER 1650.0232
LEU 1660.0149
SER 1670.0195
SER 1680.0253
GLY 1690.0221
VAL 1710.0103
HIS 1720.0124
THR 1730.0127
PHE 1740.0094
PRO 1750.0111
ALA 1760.0114
VAL 1770.0116
LEU 1780.0074
GLN 1790.0108
SER 1800.0245
ASP 1830.0050
LEU 1840.0044
TYR 1850.0059
THR 1860.0053
LEU 1870.0041
SER 1880.0043
SER 1890.0101
SER 1900.0102
VAL 1910.0095
THR 1920.0138
VAL 1930.0117
PRO 1940.0124
SER 1950.0103
SER 1960.0114
PRO 1980.0098
ARG 1990.0094
PRO 2000.0099
SER 2020.0114
GLU 2030.0127
THR 2040.0127
VAL 2050.0099
THR 2060.0119
CYS 2080.0119
ASN 2090.0113
VAL 2100.0119
ALA 2110.0074
HIS 2120.0035
PRO 2130.0061
ALA 2140.0116
SER 2150.0105
SER 2160.0111
THR 2170.0027
LYS 2180.0105
VAL 2190.0108
ASP 2200.0102
LYS 2210.0095
LYS 2220.0095
ILE 2230.0089
VAL 2260.0067
PRO 2270.0131
ARG 2280.0181
ASP 2320.0432
CYS 2330.0188
SER 20.0066
VAL 30.0056
LEU 40.0077
SER 50.0109
GLN 60.0081
SER 70.0123
PRO 80.0125
ALA 90.0106
ILE 100.0196
LEU 110.0240
SER 120.0248
ALA 130.0180
SER 140.0177
PRO 150.0058
GLY 160.0182
GLU 170.0198
LYS 180.0120
VAL 190.0120
THR 200.0115
MET 210.0105
THR 220.0072
CYS 230.0067
ARG 240.0098
ALA 250.0147
ARG 260.0324
SER 270.0144
SER 290.0180
VAL 300.0133
SER 310.0128
TYR 320.0049
MET 330.0045
HIS 340.0043
TRP 350.0050
TYR 360.0037
GLN 370.0040
GLN 380.0140
LYS 390.0371
SER 400.0752
GLY 410.1891
SER 420.1170
SER 430.0391
PRO 440.0196
LYS 450.0162
PRO 460.0094
TRP 470.0043
ILE 480.0057
HIS 490.0048
ALA 500.0058
THR 510.0066
SER 520.0114
ASN 530.0122
LEU 540.0104
ALA 550.0075
SER 560.0303
GLY 570.0061
VAL 580.0098
PRO 590.0187
ALA 600.0181
ARG 610.0183
PHE 620.0152
SER 630.0143
GLY 640.0142
SER 650.0127
GLY 660.0046
SER 670.0120
GLY 680.0187
THR 690.0158
SER 700.0108
TYR 710.0068
SER 720.0097
LEU 730.0131
THR 740.0142
ILE 750.0117
SER 760.0098
ARG 770.0180
VAL 780.0060
GLU 790.0162
ALA 800.0184
GLU 810.0220
ASP 820.0199
ALA 830.0167
ALA 840.0118
THR 850.0127
TYR 860.0086
TYR 870.0079
CYS 880.0074
GLN 890.0054
GLN 900.0058
TRP 910.0061
SER 920.0087
SER 930.0087
HIS 940.0075
PRO 950.0071
PRO 960.0061
THR 970.0058
PHE 980.0084
GLY 990.0079
SER 1000.0073
GLY 1010.0076
THR 1020.0091
LYS 1030.0154
LEU 1040.0215
GLU 1050.0237
ILE 1060.0199
LYS 1070.0150
ARG 1080.0063
ALA 1090.0131
ASP 1100.0214
ALA 1110.0202
ALA 1120.0199
PRO 1130.0136
THR 1140.0178
VAL 1150.0110
SER 1160.0067
ILE 1170.0028
PHE 1180.0020
PRO 1190.0093
PRO 1200.0094
SER 1210.0086
SER 1220.0176
GLU 1230.0154
GLN 1240.0133
LEU 1250.0178
THR 1260.0210
SER 1270.0168
GLY 1280.0144
GLY 1290.0133
ALA 1300.0137
SER 1310.0063
VAL 1320.0053
VAL 1330.0041
CYS 1340.0051
PHE 1350.0085
LEU 1360.0103
ASN 1370.0150
ASN 1380.0149
PHE 1390.0107
TYR 1400.0067
PRO 1410.0070
LYS 1420.0098
ASP 1430.0099
ILE 1440.0049
ASN 1450.0051
VAL 1460.0093
LYS 1470.0096
TRP 1480.0066
LYS 1490.0118
ILE 1500.0099
ASP 1510.0156
GLY 1520.0460
SER 1530.0550
GLU 1540.0553
ARG 1550.0123
GLN 1560.0098
ASN 1570.0279
GLY 1580.0198
VAL 1590.0154
LEU 1600.0128
ASN 1610.0116
SER 1620.0125
TRP 1630.0154
THR 1640.0201
ASP 1650.0177
GLN 1660.0087
ASP 1670.0026
SER 1680.0083
LYS 1690.0243
ASP 1700.0132
SER 1710.0130
THR 1720.0137
TYR 1730.0133
SER 1740.0146
MET 1750.0131
SER 1760.0097
SER 1770.0073
THR 1780.0068
LEU 1790.0106
THR 1800.0111
LEU 1810.0125
THR 1820.0196
LYS 1830.0153
ASP 1840.0160
GLU 1850.0108
TYR 1860.0086
GLU 1870.0020
ARG 1880.0123
HIS 1890.0120
ASN 1900.0101
SER 1910.0083
TYR 1920.0085
THR 1930.0119
CYS 1940.0069
GLU 1950.0083
ALA 1960.0084
THR 1970.0130
HIS 1980.0156
LYS 1990.0204
THR 2000.0160
SER 2010.0171
THR 2020.0577
SER 2030.0131
PRO 2040.0114
ILE 2050.0110
VAL 2060.0064
LYS 2070.0048
SER 2080.0045
PHE 2090.0064
ASN 2100.0060
ARG 2110.0066
ASN 2120.0130
GLU 2130.0132
CYS 2140.0177

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.