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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 67  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0818
ILE 4210.0175
PHE 4220.0175
ILE 4230.0192
SER 4240.0240
ASN 4250.0211
ASP 4260.0297
LYS 4270.0129
GLU 4280.0150
SER 4290.0124
ILE 4300.0103
LYS 4310.0094
CYS 4320.0088
PRO 4330.0063
CYS 4340.0052
GLU 4350.0045
PRO 4360.0152
GLU 4370.0153
ARG 4380.0213
ILE 4390.0389
SER 4400.0329
GLU 4410.0357
SER 4420.0818
THR 4430.0339
CYS 4440.0708
ASN 4450.0216
PHE 4460.0152
TYR 4470.0134
VAL 4480.0055
CYS 4490.0053
ASN 4500.0043
CYS 4510.0042
VAL 4520.0097
GLU 4530.0125
LYS 4540.0297
GLU 10.0258
VAL 20.0157
GLN 30.0114
LEU 40.0027
VAL 50.0034
GLU 60.0034
SER 70.0106
GLY 80.0083
GLY 90.0104
GLY 100.0137
LEU 110.0143
VAL 120.0154
LYS 130.0152
PRO 140.0200
GLY 150.0157
GLY 160.0054
SER 170.0051
LEU 180.0073
LYS 190.0050
LEU 200.0039
SER 210.0030
CYS 220.0055
ALA 230.0066
ALA 240.0091
SER 250.0042
GLY 260.0073
PHE 270.0104
ILE 280.0134
PHE 290.0125
SER 300.0126
ASP 310.0119
TYR 320.0113
TYR 330.0114
MET 340.0088
TYR 350.0082
TRP 360.0075
VAL 370.0061
ARG 380.0070
GLN 390.0074
THR 400.0134
PRO 410.0182
GLU 420.0328
LYS 430.0105
ARG 440.0137
LEU 450.0119
GLU 460.0040
TRP 470.0072
VAL 480.0084
ALA 490.0128
THR 500.0132
ILE 510.0144
SER 520.0176
ASP 520.0201
GLY 530.0249
ASN 540.0287
SER 550.0265
TYR 560.0234
THR 570.0246
TYR 580.0157
TYR 590.0159
VAL 600.0178
ASP 610.0237
SER 620.0170
VAL 630.0133
LYS 640.0175
GLY 650.0175
ARG 660.0112
PHE 670.0084
THR 680.0098
ILE 690.0109
SER 700.0141
ARG 710.0081
ASP 720.0155
ASN 730.0197
ALA 740.0345
LYS 750.0393
ASN 760.0155
ASN 770.0115
LEU 780.0076
TYR 790.0043
LEU 800.0074
GLN 810.0080
MET 820.0082
SER 820.0043
SER 820.0057
LEU 820.0082
LYS 830.0133
SER 840.0202
GLU 850.0176
ASP 860.0142
THR 870.0160
ALA 880.0114
ILE 890.0116
TYR 900.0105
TYR 910.0037
CYS 920.0036
ALA 930.0058
ARG 940.0061
ASP 950.0039
GLY 960.0066
PRO 970.0110
THR 980.0115
ASP 990.0148
SER 1000.0071
SER 1000.0052
GLY 1000.0050
TYR 1000.0039
GLY 1000.0020
GLY 1000.0021
PHE 1000.0034
GLY 1010.0046
TYR 1020.0056
TRP 1030.0046
GLY 1040.0063
GLN 1050.0095
GLY 1060.0122
THR 1070.0116
LEU 1080.0124
VAL 1090.0174
THR 1100.0172
VAL 1110.0177
SER 1120.0262
GLU 1130.0282
ALA 1140.0197
LYS 1150.0379
THR 1160.0228
THR 1170.0166
PRO 1180.0121
PRO 1190.0113
SER 1200.0117
VAL 1210.0058
TYR 1220.0037
PRO 1230.0067
LEU 1240.0083
ALA 1250.0076
PRO 1260.0071
GLY 1270.0076
SER 1280.0107
ALA 1290.0222
ALA 1300.0094
GLN 1330.0152
THR 1340.0078
ASN 1350.0090
SER 1360.0094
MET 1370.0087
VAL 1380.0110
THR 1390.0115
LEU 1400.0110
GLY 1410.0116
CYS 1420.0067
LEU 1430.0017
VAL 1440.0038
LYS 1450.0119
GLY 1460.0104
TYR 1470.0091
PHE 1480.0036
PRO 1490.0054
GLU 1500.0094
PRO 1510.0072
VAL 1520.0063
THR 1530.0064
VAL 1540.0089
THR 1560.0176
TRP 1570.0146
ASN 1620.0117
SER 1630.0135
GLY 1640.0242
SER 1650.0321
LEU 1660.0286
SER 1670.0459
SER 1680.0436
GLY 1690.0266
VAL 1710.0218
HIS 1720.0147
THR 1730.0114
PHE 1740.0022
PRO 1750.0118
ALA 1760.0189
VAL 1770.0288
LEU 1780.0239
GLN 1790.0369
SER 1800.0673
ASP 1830.0168
LEU 1840.0170
TYR 1850.0183
THR 1860.0132
LEU 1870.0063
SER 1880.0027
SER 1890.0112
SER 1900.0141
VAL 1910.0158
THR 1920.0146
VAL 1930.0093
PRO 1940.0053
SER 1950.0067
SER 1960.0079
PRO 1980.0057
ARG 1990.0052
PRO 2000.0099
SER 2020.0115
GLU 2030.0147
THR 2040.0134
VAL 2050.0088
THR 2060.0107
CYS 2080.0123
ASN 2090.0092
VAL 2100.0071
ALA 2110.0123
HIS 2120.0097
PRO 2130.0116
ALA 2140.0118
SER 2150.0070
SER 2160.0186
THR 2170.0172
LYS 2180.0128
VAL 2190.0124
ASP 2200.0100
LYS 2210.0094
LYS 2220.0106
ILE 2230.0093
VAL 2260.0179
PRO 2270.0210
ARG 2280.0234
ASP 2320.0736
CYS 2330.0309
SER 20.0067
VAL 30.0039
LEU 40.0027
SER 50.0055
GLN 60.0040
SER 70.0056
PRO 80.0040
ALA 90.0023
ILE 100.0047
LEU 110.0054
SER 120.0047
ALA 130.0035
SER 140.0105
PRO 150.0112
GLY 160.0156
GLU 170.0115
LYS 180.0071
VAL 190.0111
THR 200.0075
MET 210.0052
THR 220.0030
CYS 230.0055
ARG 240.0094
ALA 250.0108
ARG 260.0097
SER 270.0147
SER 290.0176
VAL 300.0122
SER 310.0125
TYR 320.0060
MET 330.0052
HIS 340.0053
TRP 350.0031
TYR 360.0028
GLN 370.0027
GLN 380.0059
LYS 390.0129
SER 400.0258
GLY 410.0762
SER 420.0481
SER 430.0188
PRO 440.0089
LYS 450.0064
PRO 460.0026
TRP 470.0057
ILE 480.0046
HIS 490.0047
ALA 500.0066
THR 510.0048
SER 520.0061
ASN 530.0061
LEU 540.0087
ALA 550.0107
SER 560.0155
GLY 570.0176
VAL 580.0130
PRO 590.0093
ALA 600.0133
ARG 610.0119
PHE 620.0108
SER 630.0100
GLY 640.0074
SER 650.0046
GLY 660.0081
SER 670.0155
GLY 680.0189
THR 690.0167
SER 700.0141
TYR 710.0060
SER 720.0051
LEU 730.0063
THR 740.0110
ILE 750.0085
SER 760.0066
ARG 770.0090
VAL 780.0050
GLU 790.0073
ALA 800.0055
GLU 810.0052
ASP 820.0044
ALA 830.0034
ALA 840.0040
THR 850.0053
TYR 860.0037
TYR 870.0036
CYS 880.0033
GLN 890.0046
GLN 900.0040
TRP 910.0042
SER 920.0065
SER 930.0054
HIS 940.0071
PRO 950.0095
PRO 960.0064
THR 970.0040
PHE 980.0041
GLY 990.0041
SER 1000.0033
GLY 1010.0025
THR 1020.0025
LYS 1030.0031
LEU 1040.0034
GLU 1050.0034
ILE 1060.0016
LYS 1070.0060
ARG 1080.0067
ALA 1090.0091
ASP 1100.0102
ALA 1110.0103
ALA 1120.0104
PRO 1130.0090
THR 1140.0105
VAL 1150.0094
SER 1160.0083
ILE 1170.0084
PHE 1180.0088
PRO 1190.0047
PRO 1200.0039
SER 1210.0033
SER 1220.0105
GLU 1230.0091
GLN 1240.0070
LEU 1250.0154
THR 1260.0306
SER 1270.0314
GLY 1280.0113
GLY 1290.0076
ALA 1300.0032
SER 1310.0065
VAL 1320.0064
VAL 1330.0064
CYS 1340.0092
PHE 1350.0091
LEU 1360.0079
ASN 1370.0101
ASN 1380.0102
PHE 1390.0082
TYR 1400.0081
PRO 1410.0076
LYS 1420.0068
ASP 1430.0045
ILE 1440.0043
ASN 1450.0066
VAL 1460.0051
LYS 1470.0056
TRP 1480.0044
LYS 1490.0074
ILE 1500.0094
ASP 1510.0096
GLY 1520.0158
SER 1530.0102
GLU 1540.0229
ARG 1550.0181
GLN 1560.0169
ASN 1570.0157
GLY 1580.0134
VAL 1590.0098
LEU 1600.0108
ASN 1610.0088
SER 1620.0070
TRP 1630.0043
THR 1640.0032
ASP 1650.0044
GLN 1660.0012
ASP 1670.0048
SER 1680.0053
LYS 1690.0141
ASP 1700.0058
SER 1710.0055
THR 1720.0071
TYR 1730.0057
SER 1740.0069
MET 1750.0072
SER 1760.0073
SER 1770.0076
THR 1780.0091
LEU 1790.0105
THR 1800.0084
LEU 1810.0048
THR 1820.0103
LYS 1830.0127
ASP 1840.0224
GLU 1850.0119
TYR 1860.0089
GLU 1870.0126
ARG 1880.0108
HIS 1890.0051
ASN 1900.0092
SER 1910.0066
TYR 1920.0040
THR 1930.0040
CYS 1940.0013
GLU 1950.0057
ALA 1960.0078
THR 1970.0114
HIS 1980.0088
LYS 1990.0073
THR 2000.0073
SER 2010.0082
THR 2020.0265
SER 2030.0212
PRO 2040.0173
ILE 2050.0135
VAL 2060.0073
LYS 2070.0045
SER 2080.0035
PHE 2090.0054
ASN 2100.0062
ARG 2110.0062
ASN 2120.0081
GLU 2130.0024
CYS 2140.0041

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.