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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 68  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1360
ILE 4210.0068
PHE 4220.0161
ILE 4230.0162
SER 4240.0177
ASN 4250.0165
ASP 4260.0142
LYS 4270.0052
GLU 4280.0052
SER 4290.0055
ILE 4300.0027
LYS 4310.0083
CYS 4320.0108
PRO 4330.0119
CYS 4340.0087
GLU 4350.0067
PRO 4360.0037
GLU 4370.0053
ARG 4380.0070
ILE 4390.0111
SER 4400.0053
GLU 4410.0019
SER 4420.0228
THR 4430.0102
CYS 4440.0227
ASN 4450.0082
PHE 4460.0102
TYR 4470.0082
VAL 4480.0060
CYS 4490.0076
ASN 4500.0069
CYS 4510.0171
VAL 4520.0338
GLU 4530.0351
LYS 4540.0872
GLU 10.0086
VAL 20.0067
GLN 30.0113
LEU 40.0059
VAL 50.0043
GLU 60.0033
SER 70.0108
GLY 80.0119
GLY 90.0094
GLY 100.0177
LEU 110.0163
VAL 120.0110
LYS 130.0159
PRO 140.0172
GLY 150.0131
GLY 160.0083
SER 170.0101
LEU 180.0106
LYS 190.0145
LEU 200.0086
SER 210.0079
CYS 220.0065
ALA 230.0061
ALA 240.0062
SER 250.0099
GLY 260.0095
PHE 270.0098
ILE 280.0141
PHE 290.0111
SER 300.0108
ASP 310.0082
TYR 320.0057
TYR 330.0066
MET 340.0061
TYR 350.0060
TRP 360.0054
VAL 370.0082
ARG 380.0044
GLN 390.0051
THR 400.0118
PRO 410.0379
GLU 420.0502
LYS 430.0116
ARG 440.0033
LEU 450.0070
GLU 460.0010
TRP 470.0011
VAL 480.0034
ALA 490.0084
THR 500.0093
ILE 510.0112
SER 520.0097
ASP 520.0083
GLY 530.0111
ASN 540.0107
SER 550.0154
TYR 560.0165
THR 570.0176
TYR 580.0138
TYR 590.0131
VAL 600.0138
ASP 610.0500
SER 620.0435
VAL 630.0234
LYS 640.0303
GLY 650.0225
ARG 660.0134
PHE 670.0149
THR 680.0152
ILE 690.0139
SER 700.0153
ARG 710.0095
ASP 720.0110
ASN 730.0183
ALA 740.0344
LYS 750.0339
ASN 760.0136
ASN 770.0118
LEU 780.0097
TYR 790.0109
LEU 800.0131
GLN 810.0170
MET 820.0114
SER 820.0098
SER 820.0084
LEU 820.0090
LYS 830.0095
SER 840.0117
GLU 850.0159
ASP 860.0146
THR 870.0156
ALA 880.0077
ILE 890.0073
TYR 900.0077
TYR 910.0086
CYS 920.0052
ALA 930.0062
ARG 940.0053
ASP 950.0019
GLY 960.0017
PRO 970.0123
THR 980.0204
ASP 990.0246
SER 1000.0082
SER 1000.0078
GLY 1000.0106
TYR 1000.0089
GLY 1000.0083
GLY 1000.0040
PHE 1000.0044
GLY 1010.0015
TYR 1020.0042
TRP 1030.0062
GLY 1040.0070
GLN 1050.0110
GLY 1060.0098
THR 1070.0094
LEU 1080.0100
VAL 1090.0126
THR 1100.0132
VAL 1110.0101
SER 1120.0212
GLU 1130.0160
ALA 1140.0144
LYS 1150.0424
THR 1160.0356
THR 1170.0290
PRO 1180.0170
PRO 1190.0100
SER 1200.0127
VAL 1210.0038
TYR 1220.0011
PRO 1230.0033
LEU 1240.0042
ALA 1250.0045
PRO 1260.0054
GLY 1270.0039
SER 1280.0084
ALA 1290.0300
ALA 1300.0140
GLN 1330.0099
THR 1340.0107
ASN 1350.0286
SER 1360.0153
MET 1370.0127
VAL 1380.0137
THR 1390.0085
LEU 1400.0091
GLY 1410.0097
CYS 1420.0078
LEU 1430.0062
VAL 1440.0057
LYS 1450.0081
GLY 1460.0093
TYR 1470.0109
PHE 1480.0153
PRO 1490.0166
GLU 1500.0133
PRO 1510.0099
VAL 1520.0059
THR 1530.0153
VAL 1540.0115
THR 1560.0123
TRP 1570.0104
ASN 1620.0162
SER 1630.0253
GLY 1640.0247
SER 1650.0263
LEU 1660.0190
SER 1670.0299
SER 1680.0310
GLY 1690.0125
VAL 1710.0066
HIS 1720.0070
THR 1730.0060
PHE 1740.0066
PRO 1750.0116
ALA 1760.0119
VAL 1770.0199
LEU 1780.0171
GLN 1790.0290
SER 1800.0400
ASP 1830.0178
LEU 1840.0161
TYR 1850.0089
THR 1860.0041
LEU 1870.0034
SER 1880.0045
SER 1890.0081
SER 1900.0074
VAL 1910.0067
THR 1920.0097
VAL 1930.0075
PRO 1940.0065
SER 1950.0047
SER 1960.0117
PRO 1980.0122
ARG 1990.0097
PRO 2000.0097
SER 2020.0102
GLU 2030.0144
THR 2040.0167
VAL 2050.0128
THR 2060.0142
CYS 2080.0132
ASN 2090.0142
VAL 2100.0161
ALA 2110.0197
HIS 2120.0056
PRO 2130.0064
ALA 2140.0211
SER 2150.0187
SER 2160.0110
THR 2170.0233
LYS 2180.0368
VAL 2190.0283
ASP 2200.0083
LYS 2210.0066
LYS 2220.0085
ILE 2230.0091
VAL 2260.0036
PRO 2270.0074
ARG 2280.0105
ASP 2320.0352
CYS 2330.0227
SER 20.0100
VAL 30.0114
LEU 40.0121
SER 50.0152
GLN 60.0141
SER 70.0202
PRO 80.0234
ALA 90.0251
ILE 100.0219
LEU 110.0093
SER 120.0067
ALA 130.0072
SER 140.0047
PRO 150.0051
GLY 160.0109
GLU 170.0098
LYS 180.0090
VAL 190.0090
THR 200.0096
MET 210.0088
THR 220.0100
CYS 230.0096
ARG 240.0126
ALA 250.0050
ARG 260.0220
SER 270.0098
SER 290.0085
VAL 300.0048
SER 310.0105
TYR 320.0082
MET 330.0070
HIS 340.0080
TRP 350.0072
TYR 360.0076
GLN 370.0068
GLN 380.0138
LYS 390.0264
SER 400.0517
GLY 410.1360
SER 420.0806
SER 430.0268
PRO 440.0144
LYS 450.0066
PRO 460.0045
TRP 470.0048
ILE 480.0068
HIS 490.0087
ALA 500.0121
THR 510.0090
SER 520.0102
ASN 530.0104
LEU 540.0096
ALA 550.0092
SER 560.0248
GLY 570.0171
VAL 580.0108
PRO 590.0106
ALA 600.0120
ARG 610.0108
PHE 620.0089
SER 630.0105
GLY 640.0103
SER 650.0137
GLY 660.0174
SER 670.0211
GLY 680.0179
THR 690.0146
SER 700.0176
TYR 710.0091
SER 720.0081
LEU 730.0067
THR 740.0113
ILE 750.0091
SER 760.0099
ARG 770.0147
VAL 780.0078
GLU 790.0055
ALA 800.0072
GLU 810.0072
ASP 820.0073
ALA 830.0078
ALA 840.0093
THR 850.0115
TYR 860.0102
TYR 870.0112
CYS 880.0114
GLN 890.0122
GLN 900.0129
TRP 910.0121
SER 920.0145
SER 930.0222
HIS 940.0177
PRO 950.0176
PRO 960.0143
THR 970.0153
PHE 980.0115
GLY 990.0105
SER 1000.0118
GLY 1010.0125
THR 1020.0107
LYS 1030.0116
LEU 1040.0078
GLU 1050.0074
ILE 1060.0072
LYS 1070.0089
ARG 1080.0125
ALA 1090.0165
ASP 1100.0115
ALA 1110.0117
ALA 1120.0116
PRO 1130.0081
THR 1140.0086
VAL 1150.0084
SER 1160.0062
ILE 1170.0048
PHE 1180.0042
PRO 1190.0068
PRO 1200.0069
SER 1210.0058
SER 1220.0149
GLU 1230.0130
GLN 1240.0095
LEU 1250.0142
THR 1260.0180
SER 1270.0123
GLY 1280.0103
GLY 1290.0079
ALA 1300.0073
SER 1310.0049
VAL 1320.0057
VAL 1330.0052
CYS 1340.0061
PHE 1350.0064
LEU 1360.0066
ASN 1370.0101
ASN 1380.0100
PHE 1390.0097
TYR 1400.0117
PRO 1410.0113
LYS 1420.0110
ASP 1430.0089
ILE 1440.0060
ASN 1450.0070
VAL 1460.0076
LYS 1470.0070
TRP 1480.0049
LYS 1490.0106
ILE 1500.0116
ASP 1510.0111
GLY 1520.0182
SER 1530.0232
GLU 1540.0349
ARG 1550.0224
GLN 1560.0182
ASN 1570.0153
GLY 1580.0085
VAL 1590.0050
LEU 1600.0046
ASN 1610.0061
SER 1620.0058
TRP 1630.0059
THR 1640.0093
ASP 1650.0109
GLN 1660.0066
ASP 1670.0072
SER 1680.0072
LYS 1690.0172
ASP 1700.0136
SER 1710.0108
THR 1720.0106
TYR 1730.0078
SER 1740.0078
MET 1750.0077
SER 1760.0045
SER 1770.0039
THR 1780.0045
LEU 1790.0081
THR 1800.0068
LEU 1810.0054
THR 1820.0192
LYS 1830.0167
ASP 1840.0243
GLU 1850.0117
TYR 1860.0087
GLU 1870.0097
ARG 1880.0071
HIS 1890.0078
ASN 1900.0096
SER 1910.0060
TYR 1920.0053
THR 1930.0057
CYS 1940.0023
GLU 1950.0049
ALA 1960.0065
THR 1970.0099
HIS 1980.0076
LYS 1990.0071
THR 2000.0067
SER 2010.0044
THR 2020.0059
SER 2030.0145
PRO 2040.0126
ILE 2050.0086
VAL 2060.0065
LYS 2070.0037
SER 2080.0020
PHE 2090.0068
ASN 2100.0060
ARG 2110.0044
ASN 2120.0088
GLU 2130.0114
CYS 2140.0143

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.