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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 69  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0670
ILE 4210.0098
PHE 4220.0108
ILE 4230.0090
SER 4240.0101
ASN 4250.0113
ASP 4260.0132
LYS 4270.0035
GLU 4280.0066
SER 4290.0046
ILE 4300.0054
LYS 4310.0079
CYS 4320.0070
PRO 4330.0054
CYS 4340.0024
GLU 4350.0017
PRO 4360.0074
GLU 4370.0080
ARG 4380.0101
ILE 4390.0164
SER 4400.0139
GLU 4410.0145
SER 4420.0278
THR 4430.0111
CYS 4440.0241
ASN 4450.0096
PHE 4460.0076
TYR 4470.0084
VAL 4480.0027
CYS 4490.0035
ASN 4500.0041
CYS 4510.0067
VAL 4520.0153
GLU 4530.0193
LYS 4540.0468
GLU 10.0147
VAL 20.0059
GLN 30.0161
LEU 40.0117
VAL 50.0119
GLU 60.0110
SER 70.0105
GLY 80.0110
GLY 90.0086
GLY 100.0130
LEU 110.0099
VAL 120.0119
LYS 130.0092
PRO 140.0177
GLY 150.0303
GLY 160.0193
SER 170.0151
LEU 180.0147
LYS 190.0113
LEU 200.0095
SER 210.0120
CYS 220.0107
ALA 230.0059
ALA 240.0050
SER 250.0114
GLY 260.0108
PHE 270.0111
ILE 280.0161
PHE 290.0111
SER 300.0089
ASP 310.0119
TYR 320.0078
TYR 330.0051
MET 340.0069
TYR 350.0071
TRP 360.0080
VAL 370.0050
ARG 380.0021
GLN 390.0035
THR 400.0085
PRO 410.0156
GLU 420.0186
LYS 430.0106
ARG 440.0081
LEU 450.0059
GLU 460.0045
TRP 470.0052
VAL 480.0052
ALA 490.0084
THR 500.0085
ILE 510.0090
SER 520.0072
ASP 520.0089
GLY 530.0135
ASN 540.0144
SER 550.0096
TYR 560.0096
THR 570.0104
TYR 580.0075
TYR 590.0094
VAL 600.0113
ASP 610.0090
SER 620.0050
VAL 630.0077
LYS 640.0082
GLY 650.0108
ARG 660.0102
PHE 670.0102
THR 680.0132
ILE 690.0133
SER 700.0245
ARG 710.0159
ASP 720.0201
ASN 730.0189
ALA 740.0449
LYS 750.0450
ASN 760.0123
ASN 770.0095
LEU 780.0105
TYR 790.0128
LEU 800.0121
GLN 810.0133
MET 820.0118
SER 820.0139
SER 820.0155
LEU 820.0132
LYS 830.0133
SER 840.0126
GLU 850.0137
ASP 860.0104
THR 870.0112
ALA 880.0037
ILE 890.0017
TYR 900.0052
TYR 910.0073
CYS 920.0080
ALA 930.0088
ARG 940.0060
ASP 950.0042
GLY 960.0045
PRO 970.0066
THR 980.0065
ASP 990.0032
SER 1000.0023
SER 1000.0027
GLY 1000.0039
TYR 1000.0031
GLY 1000.0024
GLY 1000.0023
PHE 1000.0042
GLY 1010.0050
TYR 1020.0073
TRP 1030.0088
GLY 1040.0104
GLN 1050.0110
GLY 1060.0091
THR 1070.0073
LEU 1080.0050
VAL 1090.0124
THR 1100.0123
VAL 1110.0142
SER 1120.0248
GLU 1130.0367
ALA 1140.0289
LYS 1150.0410
THR 1160.0232
THR 1170.0144
PRO 1180.0104
PRO 1190.0132
SER 1200.0166
VAL 1210.0085
TYR 1220.0062
PRO 1230.0079
LEU 1240.0082
ALA 1250.0081
PRO 1260.0081
GLY 1270.0157
SER 1280.0153
ALA 1290.0320
ALA 1300.0219
GLN 1330.0458
THR 1340.0292
ASN 1350.0310
SER 1360.0338
MET 1370.0236
VAL 1380.0129
THR 1390.0078
LEU 1400.0077
GLY 1410.0095
CYS 1420.0085
LEU 1430.0080
VAL 1440.0093
LYS 1450.0104
GLY 1460.0094
TYR 1470.0074
PHE 1480.0045
PRO 1490.0053
GLU 1500.0081
PRO 1510.0087
VAL 1520.0103
THR 1530.0135
VAL 1540.0155
THR 1560.0204
TRP 1570.0099
ASN 1620.0304
SER 1630.0540
GLY 1640.0504
SER 1650.0394
LEU 1660.0033
SER 1670.0398
SER 1680.0623
GLY 1690.0361
VAL 1710.0192
HIS 1720.0171
THR 1730.0165
PHE 1740.0152
PRO 1750.0171
ALA 1760.0111
VAL 1770.0103
LEU 1780.0061
GLN 1790.0067
SER 1800.0252
ASP 1830.0068
LEU 1840.0046
TYR 1850.0051
THR 1860.0058
LEU 1870.0041
SER 1880.0055
SER 1890.0075
SER 1900.0097
VAL 1910.0124
THR 1920.0119
VAL 1930.0037
PRO 1940.0126
SER 1950.0227
SER 1960.0142
PRO 1980.0079
ARG 1990.0081
PRO 2000.0198
SER 2020.0454
GLU 2030.0372
THR 2040.0162
VAL 2050.0143
THR 2060.0091
CYS 2080.0057
ASN 2090.0110
VAL 2100.0166
ALA 2110.0193
HIS 2120.0114
PRO 2130.0129
ALA 2140.0190
SER 2150.0107
SER 2160.0104
THR 2170.0238
LYS 2180.0271
VAL 2190.0276
ASP 2200.0081
LYS 2210.0054
LYS 2220.0028
ILE 2230.0063
VAL 2260.0124
PRO 2270.0121
ARG 2280.0129
ASP 2320.0519
CYS 2330.0237
SER 20.0076
VAL 30.0086
LEU 40.0082
SER 50.0031
GLN 60.0045
SER 70.0056
PRO 80.0082
ALA 90.0059
ILE 100.0069
LEU 110.0079
SER 120.0062
ALA 130.0067
SER 140.0073
PRO 150.0070
GLY 160.0088
GLU 170.0063
LYS 180.0066
VAL 190.0077
THR 200.0081
MET 210.0072
THR 220.0061
CYS 230.0062
ARG 240.0044
ALA 250.0042
ARG 260.0051
SER 270.0041
SER 290.0050
VAL 300.0063
SER 310.0061
TYR 320.0056
MET 330.0053
HIS 340.0047
TRP 350.0023
TYR 360.0014
GLN 370.0017
GLN 380.0062
LYS 390.0078
SER 400.0110
GLY 410.0157
SER 420.0102
SER 430.0094
PRO 440.0066
LYS 450.0045
PRO 460.0040
TRP 470.0010
ILE 480.0010
HIS 490.0029
ALA 500.0056
THR 510.0048
SER 520.0050
ASN 530.0029
LEU 540.0017
ALA 550.0016
SER 560.0081
GLY 570.0024
VAL 580.0031
PRO 590.0059
ALA 600.0063
ARG 610.0091
PHE 620.0058
SER 630.0045
GLY 640.0041
SER 650.0058
GLY 660.0062
SER 670.0079
GLY 680.0060
THR 690.0054
SER 700.0064
TYR 710.0043
SER 720.0041
LEU 730.0051
THR 740.0089
ILE 750.0081
SER 760.0074
ARG 770.0109
VAL 780.0071
GLU 790.0068
ALA 800.0058
GLU 810.0081
ASP 820.0075
ALA 830.0053
ALA 840.0049
THR 850.0043
TYR 860.0022
TYR 870.0034
CYS 880.0052
GLN 890.0078
GLN 900.0062
TRP 910.0050
SER 920.0082
SER 930.0132
HIS 940.0129
PRO 950.0123
PRO 960.0082
THR 970.0108
PHE 980.0059
GLY 990.0063
SER 1000.0055
GLY 1010.0039
THR 1020.0050
LYS 1030.0054
LEU 1040.0060
GLU 1050.0049
ILE 1060.0038
LYS 1070.0075
ARG 1080.0101
ALA 1090.0125
ASP 1100.0199
ALA 1110.0177
ALA 1120.0148
PRO 1130.0067
THR 1140.0090
VAL 1150.0041
SER 1160.0053
ILE 1170.0051
PHE 1180.0052
PRO 1190.0071
PRO 1200.0076
SER 1210.0074
SER 1220.0157
GLU 1230.0117
GLN 1240.0044
LEU 1250.0136
THR 1260.0256
SER 1270.0222
GLY 1280.0032
GLY 1290.0034
ALA 1300.0023
SER 1310.0055
VAL 1320.0042
VAL 1330.0041
CYS 1340.0025
PHE 1350.0059
LEU 1360.0073
ASN 1370.0128
ASN 1380.0130
PHE 1390.0079
TYR 1400.0065
PRO 1410.0054
LYS 1420.0089
ASP 1430.0154
ILE 1440.0114
ASN 1450.0150
VAL 1460.0090
LYS 1470.0083
TRP 1480.0061
LYS 1490.0026
ILE 1500.0151
ASP 1510.0211
GLY 1520.0201
SER 1530.0208
GLU 1540.0187
ARG 1550.0267
GLN 1560.0417
ASN 1570.0670
GLY 1580.0279
VAL 1590.0190
LEU 1600.0155
ASN 1610.0173
SER 1620.0205
TRP 1630.0228
THR 1640.0175
ASP 1650.0108
GLN 1660.0083
ASP 1670.0135
SER 1680.0166
LYS 1690.0466
ASP 1700.0108
SER 1710.0104
THR 1720.0149
TYR 1730.0129
SER 1740.0146
MET 1750.0155
SER 1760.0115
SER 1770.0082
THR 1780.0045
LEU 1790.0075
THR 1800.0074
LEU 1810.0082
THR 1820.0212
LYS 1830.0218
ASP 1840.0334
GLU 1850.0209
TYR 1860.0160
GLU 1870.0184
ARG 1880.0193
HIS 1890.0084
ASN 1900.0066
SER 1910.0118
TYR 1920.0081
THR 1930.0081
CYS 1940.0041
GLU 1950.0052
ALA 1960.0068
THR 1970.0110
HIS 1980.0121
LYS 1990.0179
THR 2000.0135
SER 2010.0192
THR 2020.0474
SER 2030.0183
PRO 2040.0145
ILE 2050.0122
VAL 2060.0071
LYS 2070.0074
SER 2080.0097
PHE 2090.0131
ASN 2100.0124
ARG 2110.0105
ASN 2120.0256
GLU 2130.0123
CYS 2140.0096

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.