Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* 2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex *

CA strain for 2608162333311823063

--- normal mode 7 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ILE 421 PHE 422 -0.0003

PHE 422 ILE 423 -0.0005

ILE 423 SER 424 0.0023

SER 424 ASN 425 0.0001

ASN 425 ASP 426 -0.0002

ASP 426 LYS 427 0.0127

LYS 427 GLU 428 0.0001

GLU 428 SER 429 -0.0003

SER 429 ILE 430 -0.0052

ILE 430 LYS 431 0.0001

LYS 431 CYS 432 -0.0001

CYS 432 PRO 433 -0.0116

PRO 433 CYS 434 0.0001

CYS 434 GLU 435 -0.0002

GLU 435 PRO 436 0.0017

PRO 436 GLU 437 0.0003

GLU 437 ARG 438 0.0002

ARG 438 ILE 439 0.0075

ILE 439 SER 440 -0.0001

SER 440 GLU 441 0.0001

GLU 441 SER 442 -0.0030

SER 442 THR 443 0.0000

THR 443 CYS 444 0.0003

CYS 444 ASN 445 -0.0019

ASN 445 PHE 446 -0.0001

PHE 446 TYR 447 0.0002

TYR 447 VAL 448 -0.0233

VAL 448 CYS 449 0.0001

CYS 449 ASN 450 0.0004

ASN 450 CYS 451 -0.0113

CYS 451 VAL 452 0.0002

VAL 452 GLU 453 -0.0002

GLU 453 LYS 454 0.0071

LYS 454 GLU 1 0.0010

GLU 1 VAL 2 -0.0000

VAL 2 GLN 3 -0.0002

GLN 3 LEU 4 0.0080

LEU 4 VAL 5 -0.0001

VAL 5 GLU 6 0.0001

GLU 6 SER 7 0.0105

SER 7 GLY 8 0.0003

GLY 8 GLY 9 0.0004

GLY 9 GLY 10 0.1035

GLY 10 LEU 11 -0.0002

LEU 11 VAL 12 -0.0001

VAL 12 LYS 13 0.0297

LYS 13 PRO 14 0.0002

PRO 14 GLY 15 0.0000

GLY 15 GLY 16 -0.0170

GLY 16 SER 17 0.0002

SER 17 LEU 18 -0.0001

LEU 18 LYS 19 -0.0147

LYS 19 LEU 20 -0.0003

LEU 20 SER 21 -0.0000

SER 21 CYS 22 -0.0120

CYS 22 ALA 23 0.0001

ALA 23 ALA 24 0.0002

ALA 24 SER 25 -0.0018

SER 25 GLY 26 -0.0001

GLY 26 PHE 27 0.0001

PHE 27 ILE 28 0.0002

ILE 28 PHE 29 -0.0001

PHE 29 SER 30 -0.0005

SER 30 ASP 31 0.0010

ASP 31 TYR 32 -0.0000

TYR 32 TYR 33 -0.0000

TYR 33 MET 34 0.0151

MET 34 TYR 35 0.0000

TYR 35 TRP 36 -0.0001

TRP 36 VAL 37 -0.0011

VAL 37 ARG 38 -0.0001

ARG 38 GLN 39 0.0002

GLN 39 THR 40 -0.0105

THR 40 PRO 41 0.0002

PRO 41 GLU 42 0.0002

GLU 42 LYS 43 -0.0057

LYS 43 ARG 44 -0.0002

ARG 44 LEU 45 -0.0002

LEU 45 GLU 46 -0.0074

GLU 46 TRP 47 0.0001

TRP 47 VAL 48 -0.0004

VAL 48 ALA 49 -0.0026

ALA 49 THR 50 -0.0000

THR 50 ILE 51 -0.0000

ILE 51 SER 52 -0.0014

SER 52 ASP 52 -0.0003

ASP 52 GLY 53 -0.0003

GLY 53 ASN 54 0.0000

ASN 54 SER 55 -0.0025

SER 55 TYR 56 0.0001

TYR 56 THR 57 0.0004

THR 57 TYR 58 -0.0069

TYR 58 TYR 59 0.0000

TYR 59 VAL 60 -0.0002

VAL 60 ASP 61 -0.0041

ASP 61 SER 62 0.0005

SER 62 VAL 63 -0.0002

VAL 63 LYS 64 0.0099

LYS 64 GLY 65 0.0001

GLY 65 ARG 66 -0.0002

ARG 66 PHE 67 -0.0091

PHE 67 THR 68 -0.0001

THR 68 ILE 69 0.0000

ILE 69 SER 70 -0.0176

SER 70 ARG 71 -0.0001

ARG 71 ASP 72 0.0000

ASP 72 ASN 73 -0.0042

ASN 73 ALA 74 -0.0003

ALA 74 LYS 75 0.0002

LYS 75 ASN 76 -0.0031

ASN 76 ASN 77 0.0004

ASN 77 LEU 78 -0.0001

LEU 78 TYR 79 -0.0101

TYR 79 LEU 80 0.0001

LEU 80 GLN 81 -0.0000

GLN 81 MET 82 -0.0294

MET 82 SER 82 -0.0001

SER 82 SER 82 -0.0000

SER 82 LEU 82 -0.0001

LEU 82 LYS 83 -0.0000

LYS 83 SER 84 0.0000

SER 84 GLU 85 -0.0136

GLU 85 ASP 86 -0.0000

ASP 86 THR 87 -0.0002

THR 87 ALA 88 -0.0001

ALA 88 ILE 89 0.0002

ILE 89 TYR 90 -0.0000

TYR 90 TYR 91 0.0006

TYR 91 CYS 92 0.0005

CYS 92 ALA 93 -0.0003

ALA 93 ARG 94 0.0146

ARG 94 ASP 95 -0.0000

ASP 95 GLY 96 0.0000

GLY 96 PRO 97 0.0132

PRO 97 THR 98 0.0001

THR 98 ASP 99 0.0001

ASP 99 SER 100 -0.0007

SER 100 SER 100 -0.0001

SER 100 GLY 100 -0.0001

GLY 100 TYR 100 0.0002

TYR 100 GLY 100 0.0000

GLY 100 GLY 100 0.0000

GLY 100 PHE 100 -0.0001

PHE 100 GLY 101 0.0002

GLY 101 TYR 102 -0.0002

TYR 102 TRP 103 0.0138

TRP 103 GLY 104 0.0000

GLY 104 GLN 105 -0.0000

GLN 105 GLY 106 0.0182

GLY 106 THR 107 -0.0003

THR 107 LEU 108 -0.0000

LEU 108 VAL 109 0.0379

VAL 109 THR 110 -0.0003

THR 110 VAL 111 -0.0001

VAL 111 SER 112 -0.0505

SER 112 GLU 113 -0.0003

GLU 113 ALA 114 0.0001

ALA 114 LYS 115 -0.0981

LYS 115 THR 116 0.0000

THR 116 THR 117 -0.0002

THR 117 PRO 118 -0.0535

PRO 118 PRO 119 -0.0001

PRO 119 SER 120 0.0003

SER 120 VAL 121 -0.0474

VAL 121 TYR 122 0.0002

TYR 122 PRO 123 -0.0001

PRO 123 LEU 124 -0.0081

LEU 124 ALA 125 0.0004

ALA 125 PRO 126 0.0000

PRO 126 GLY 127 0.0106

GLY 127 SER 128 0.0001

SER 128 ALA 129 -0.0002

ALA 129 ALA 130 0.0060

ALA 130 GLN 133 -0.0157

GLN 133 THR 134 -0.0001

THR 134 ASN 135 -0.0003

ASN 135 SER 136 -0.0044

SER 136 MET 137 0.0001

MET 137 VAL 138 0.0001

VAL 138 THR 139 -0.0040

THR 139 LEU 140 0.0001

LEU 140 GLY 141 0.0003

GLY 141 CYS 142 -0.0183

CYS 142 LEU 143 0.0001

LEU 143 VAL 144 -0.0004

VAL 144 LYS 145 -0.0178

LYS 145 GLY 146 0.0000

GLY 146 TYR 147 0.0001

TYR 147 PHE 148 -0.0365

PHE 148 PRO 149 0.0002

PRO 149 GLU 150 -0.0004

GLU 150 PRO 151 0.0725

PRO 151 VAL 152 0.0002

VAL 152 THR 153 -0.0003

THR 153 VAL 154 0.0545

VAL 154 THR 156 0.0168

THR 156 TRP 157 0.0002

TRP 157 ASN 162 0.0027

ASN 162 SER 163 -0.0001

SER 163 GLY 164 -0.0000

GLY 164 SER 165 0.0003

SER 165 LEU 166 -0.0002

LEU 166 SER 167 -0.0003

SER 167 SER 168 -0.0239

SER 168 GLY 169 -0.0001

GLY 169 VAL 171 -0.0133

VAL 171 HIS 172 0.0004

HIS 172 THR 173 -0.0002

THR 173 PHE 174 0.0140

PHE 174 PRO 175 0.0002

PRO 175 ALA 176 -0.0000

ALA 176 VAL 177 0.0067

VAL 177 LEU 178 0.0002

LEU 178 GLN 179 -0.0001

GLN 179 SER 180 -0.0036

SER 180 ASP 183 -0.0206

ASP 183 LEU 184 0.0003

LEU 184 TYR 185 -0.0001

TYR 185 THR 186 -0.0283

THR 186 LEU 187 0.0000

LEU 187 SER 188 -0.0002

SER 188 SER 189 -0.0052

SER 189 SER 190 -0.0002

SER 190 VAL 191 0.0001

VAL 191 THR 192 0.0022

THR 192 VAL 193 -0.0001

VAL 193 PRO 194 0.0004

PRO 194 SER 195 0.0054

SER 195 SER 196 0.0001

SER 196 PRO 198 -0.0006

PRO 198 ARG 199 -0.0002

ARG 199 PRO 200 0.0000

PRO 200 SER 202 -0.0072

SER 202 GLU 203 0.0001

GLU 203 THR 204 -0.0000

THR 204 VAL 205 0.0042

VAL 205 THR 206 -0.0003

THR 206 CYS 208 0.0108

CYS 208 ASN 209 0.0001

ASN 209 VAL 210 -0.0001

VAL 210 ALA 211 0.0258

ALA 211 HIS 212 0.0001

HIS 212 PRO 213 -0.0000

PRO 213 ALA 214 0.0315

ALA 214 SER 215 -0.0000

SER 215 SER 216 -0.0001

SER 216 THR 217 0.0253

THR 217 LYS 218 -0.0002

LYS 218 VAL 219 0.0002

VAL 219 ASP 220 0.0039

ASP 220 LYS 221 -0.0001

LYS 221 LYS 222 -0.0003

LYS 222 ILE 223 0.0018

ILE 223 VAL 226 0.0102

VAL 226 PRO 227 0.0002

PRO 227 ARG 228 -0.0001

ARG 228 ASP 232 0.0045

ASP 232 CYS 233 0.0000

CYS 233 SER 2 -0.0160

SER 2 VAL 3 0.0000

VAL 3 LEU 4 -0.0000

LEU 4 SER 5 -0.0270

SER 5 GLN 6 0.0001

GLN 6 SER 7 -0.0003

SER 7 PRO 8 -0.0901

PRO 8 ALA 9 -0.0001

ALA 9 ILE 10 0.0001

ILE 10 LEU 11 0.0313

LEU 11 SER 12 0.0001

SER 12 ALA 13 -0.0002

ALA 13 SER 14 0.0304

SER 14 PRO 15 -0.0004

PRO 15 GLY 16 -0.0003

GLY 16 GLU 17 0.0193

GLU 17 LYS 18 0.0001

LYS 18 VAL 19 -0.0002

VAL 19 THR 20 0.0019

THR 20 MET 21 0.0001

MET 21 THR 22 0.0000

THR 22 CYS 23 0.0032

CYS 23 ARG 24 -0.0000

ARG 24 ALA 25 -0.0002

ALA 25 ARG 26 -0.0026

ARG 26 SER 27 -0.0003

SER 27 SER 29 -0.0007

SER 29 VAL 30 -0.0004

VAL 30 SER 31 -0.0000

SER 31 TYR 32 -0.0010

TYR 32 MET 33 -0.0001

MET 33 HIS 34 0.0004

HIS 34 TRP 35 0.0079

TRP 35 TYR 36 -0.0001

TYR 36 GLN 37 0.0003

GLN 37 GLN 38 0.0050

GLN 38 LYS 39 -0.0002

LYS 39 SER 40 -0.0000

SER 40 GLY 41 0.0225

GLY 41 SER 42 -0.0001

SER 42 SER 43 -0.0001

SER 43 PRO 44 -0.0017

PRO 44 LYS 45 -0.0000

LYS 45 PRO 46 0.0000

PRO 46 TRP 47 -0.0112

TRP 47 ILE 48 -0.0001

ILE 48 HIS 49 -0.0003

HIS 49 ALA 50 0.0033

ALA 50 THR 51 0.0002

THR 51 SER 52 -0.0001

SER 52 ASN 53 -0.0020

ASN 53 LEU 54 -0.0003

LEU 54 ALA 55 0.0001

ALA 55 SER 56 -0.0017

SER 56 GLY 57 -0.0000

GLY 57 VAL 58 -0.0001

VAL 58 PRO 59 -0.0036

PRO 59 ALA 60 0.0003

ALA 60 ARG 61 -0.0000

ARG 61 PHE 62 0.0084

PHE 62 SER 63 0.0002

SER 63 GLY 64 -0.0002

GLY 64 SER 65 0.0411

SER 65 GLY 66 0.0000

GLY 66 SER 67 0.0000

SER 67 GLY 68 0.0207

GLY 68 THR 69 0.0002

THR 69 SER 70 -0.0001

SER 70 TYR 71 0.0110

TYR 71 SER 72 -0.0001

SER 72 LEU 73 -0.0000

LEU 73 THR 74 0.0130

THR 74 ILE 75 -0.0000

ILE 75 SER 76 -0.0000

SER 76 ARG 77 0.0096

ARG 77 VAL 78 0.0001

VAL 78 GLU 79 0.0003

GLU 79 ALA 80 0.0452

ALA 80 GLU 81 0.0003

GLU 81 ASP 82 -0.0001

ASP 82 ALA 83 -0.0192

ALA 83 ALA 84 -0.0001

ALA 84 THR 85 0.0005

THR 85 TYR 86 -0.0099

TYR 86 TYR 87 -0.0003

TYR 87 CYS 88 0.0003

CYS 88 GLN 89 -0.0133

GLN 89 GLN 90 -0.0002

GLN 90 TRP 91 0.0000

TRP 91 SER 92 -0.0035

SER 92 SER 93 -0.0002

SER 93 HIS 94 0.0005

HIS 94 PRO 95 0.0002

PRO 95 PRO 96 0.0000

PRO 96 THR 97 0.0002

THR 97 PHE 98 -0.0227

PHE 98 GLY 99 0.0000

GLY 99 SER 100 0.0002

SER 100 GLY 101 -0.0175

GLY 101 THR 102 0.0001

THR 102 LYS 103 0.0002

LYS 103 LEU 104 0.0126

LEU 104 GLU 105 0.0003

GLU 105 ILE 106 0.0000

ILE 106 LYS 107 0.0261

LYS 107 ARG 108 -0.0001

ARG 108 ALA 109 0.0000

ALA 109 ASP 110 -0.0060

ASP 110 ALA 111 -0.0000

ALA 111 ALA 112 -0.0002

ALA 112 PRO 113 -0.0141

PRO 113 THR 114 -0.0002

THR 114 VAL 115 0.0003

VAL 115 SER 116 -0.0121

SER 116 ILE 117 -0.0000

ILE 117 PHE 118 -0.0000

PHE 118 PRO 119 0.0070

PRO 119 PRO 120 0.0003

PRO 120 SER 121 -0.0003

SER 121 SER 122 0.0034

SER 122 GLU 123 -0.0000

GLU 123 GLN 124 0.0001

GLN 124 LEU 125 0.0057

LEU 125 THR 126 -0.0001

THR 126 SER 127 -0.0003

SER 127 GLY 128 0.0014

GLY 128 GLY 129 -0.0002

GLY 129 ALA 130 0.0001

ALA 130 SER 131 -0.0025

SER 131 VAL 132 -0.0000

VAL 132 VAL 133 0.0003

VAL 133 CYS 134 0.0092

CYS 134 PHE 135 -0.0002

PHE 135 LEU 136 0.0002

LEU 136 ASN 137 0.0383

ASN 137 ASN 138 -0.0000

ASN 138 PHE 139 -0.0001

PHE 139 TYR 140 -0.0411

TYR 140 PRO 141 -0.0004

PRO 141 LYS 142 -0.0000

LYS 142 ASP 143 -0.0711

ASP 143 ILE 144 0.0001

ILE 144 ASN 145 0.0000

ASN 145 VAL 146 -0.0295

VAL 146 LYS 147 -0.0001

LYS 147 TRP 148 0.0001

TRP 148 LYS 149 -0.0112

LYS 149 ILE 150 -0.0000

ILE 150 ASP 151 -0.0002

ASP 151 GLY 152 0.0022

GLY 152 SER 153 -0.0002

SER 153 GLU 154 -0.0005

GLU 154 ARG 155 -0.0047

ARG 155 GLN 156 0.0002

GLN 156 ASN 157 0.0001

ASN 157 GLY 158 -0.0059

GLY 158 VAL 159 -0.0002

VAL 159 LEU 160 -0.0000

LEU 160 ASN 161 -0.0239

ASN 161 SER 162 0.0001

SER 162 TRP 163 0.0001

TRP 163 THR 164 -0.0189

THR 164 ASP 165 -0.0004

ASP 165 GLN 166 -0.0000

GLN 166 ASP 167 -0.0687

ASP 167 SER 168 0.0003

SER 168 LYS 169 0.0001

LYS 169 ASP 170 0.0605

ASP 170 SER 171 0.0000

SER 171 THR 172 -0.0003

THR 172 TYR 173 0.0100

TYR 173 SER 174 0.0002

SER 174 MET 175 0.0002

MET 175 SER 176 -0.0117

SER 176 SER 177 -0.0003

SER 177 THR 178 -0.0001

THR 178 LEU 179 -0.0062

LEU 179 THR 180 0.0001

THR 180 LEU 181 -0.0003

LEU 181 THR 182 -0.0047

THR 182 LYS 183 -0.0004

LYS 183 ASP 184 0.0000

ASP 184 GLU 185 0.0041

GLU 185 TYR 186 0.0002

TYR 186 GLU 187 0.0002

GLU 187 ARG 188 0.0011

ARG 188 HIS 189 0.0001

HIS 189 ASN 190 0.0000

ASN 190 SER 191 -0.0026

SER 191 TYR 192 0.0003

TYR 192 THR 193 -0.0000

THR 193 CYS 194 -0.0031

CYS 194 GLU 195 -0.0004

GLU 195 ALA 196 0.0001

ALA 196 THR 197 -0.0051

THR 197 HIS 198 0.0002

HIS 198 LYS 199 0.0001

LYS 199 THR 200 0.0086

THR 200 SER 201 0.0003

SER 201 THR 202 -0.0001

THR 202 SER 203 -0.0010

SER 203 PRO 204 0.0002

PRO 204 ILE 205 -0.0002

ILE 205 VAL 206 -0.0160

VAL 206 LYS 207 0.0002

LYS 207 SER 208 0.0001

SER 208 PHE 209 -0.0148

PHE 209 ASN 210 -0.0001

ASN 210 ARG 211 0.0002

ARG 211 ASN 212 -0.0033

ASN 212 GLU 213 0.0001

GLU 213 CYS 214 -0.0000

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.

Should you encounter any unexpected behaviour, please let us know. elNémo has been relocated. **Some cleaning from time to time** Sorry for the inconvenience.

*** 2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex ***

CA strain for 2608162333311823063

--- normal mode 7 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* 2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex *