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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0412
ILE 4210.0293
PHE 4220.0284
ILE 4230.0288
SER 4240.0304
ASN 4250.0318
ASP 4260.0290
LYS 4270.0238
GLU 4280.0220
SER 4290.0253
ILE 4300.0228
LYS 4310.0190
CYS 4320.0161
PRO 4330.0116
CYS 4340.0103
GLU 4350.0129
PRO 4360.0167
GLU 4370.0186
ARG 4380.0230
ILE 4390.0269
SER 4400.0315
GLU 4410.0360
SER 4420.0412
THR 4430.0396
CYS 4440.0374
ASN 4450.0320
PHE 4460.0298
TYR 4470.0250
VAL 4480.0225
CYS 4490.0186
ASN 4500.0157
CYS 4510.0135
VAL 4520.0168
GLU 4530.0169
LYS 4540.0201
GLU 10.0241
VAL 20.0203
GLN 30.0197
LEU 40.0162
VAL 50.0178
GLU 60.0155
SER 70.0169
GLY 80.0166
GLY 90.0169
GLY 100.0185
LEU 110.0195
VAL 120.0191
LYS 130.0195
PRO 140.0184
GLY 150.0167
GLY 160.0161
SER 170.0135
LEU 180.0133
LYS 190.0115
LEU 200.0121
SER 210.0135
CYS 220.0141
ALA 230.0180
ALA 240.0181
SER 250.0221
GLY 260.0241
PHE 270.0226
ILE 280.0230
PHE 290.0193
SER 300.0195
ASP 310.0203
TYR 320.0160
TYR 330.0120
MET 340.0089
TYR 350.0049
TRP 360.0044
VAL 370.0050
ARG 380.0087
GLN 390.0116
THR 400.0147
PRO 410.0183
GLU 420.0180
LYS 430.0145
ARG 440.0123
LEU 450.0087
GLU 460.0072
TRP 470.0036
VAL 480.0037
ALA 490.0010
THR 500.0047
ILE 510.0080
SER 520.0122
ASP 520.0159
GLY 530.0194
ASN 540.0177
SER 550.0132
TYR 560.0121
THR 570.0078
TYR 580.0068
TYR 590.0055
VAL 600.0077
ASP 610.0110
SER 620.0118
VAL 630.0083
LYS 640.0076
GLY 650.0069
ARG 660.0071
PHE 670.0045
THR 680.0016
ILE 690.0039
SER 700.0074
ARG 710.0117
ASP 720.0157
ASN 730.0190
ALA 740.0221
LYS 750.0212
ASN 760.0195
ASN 770.0159
LEU 780.0115
TYR 790.0095
LEU 800.0069
GLN 810.0069
MET 820.0088
SER 820.0102
SER 820.0126
LEU 820.0139
LYS 830.0160
SER 840.0184
GLU 850.0166
ASP 860.0138
THR 870.0163
ALA 880.0149
ILE 890.0141
TYR 900.0109
TYR 910.0097
CYS 920.0088
ALA 930.0081
ARG 940.0098
ASP 950.0105
GLY 960.0126
PRO 970.0171
THR 980.0196
ASP 990.0178
SER 1000.0132
SER 1000.0131
GLY 1000.0137
TYR 1000.0109
GLY 1000.0078
GLY 1000.0054
PHE 1000.0055
GLY 1010.0094
TYR 1020.0115
TRP 1030.0106
GLY 1040.0136
GLN 1050.0161
GLY 1060.0138
THR 1070.0156
LEU 1080.0175
VAL 1090.0165
THR 1100.0187
VAL 1110.0187
SER 1120.0195
GLU 1130.0201
ALA 1140.0196
LYS 1150.0180
THR 1160.0177
THR 1170.0149
PRO 1180.0138
PRO 1190.0107
SER 1200.0080
VAL 1210.0106
TYR 1220.0105
PRO 1230.0142
LEU 1240.0125
ALA 1250.0169
PRO 1260.0175
GLY 1270.0202
SER 1280.0244
ALA 1290.0236
ALA 1300.0192
GLN 1330.0240
THR 1340.0224
ASN 1350.0187
SER 1360.0230
MET 1370.0199
VAL 1380.0186
THR 1390.0142
LEU 1400.0148
GLY 1410.0114
CYS 1420.0111
LEU 1430.0067
VAL 1440.0084
LYS 1450.0054
GLY 1460.0073
TYR 1470.0120
PHE 1480.0164
PRO 1490.0182
GLU 1500.0183
PRO 1510.0198
VAL 1520.0174
THR 1530.0193
VAL 1540.0189
THR 1560.0226
TRP 1570.0232
ASN 1620.0282
SER 1630.0300
GLY 1640.0297
SER 1650.0321
LEU 1660.0270
SER 1670.0255
SER 1680.0226
GLY 1690.0178
VAL 1710.0168
HIS 1720.0134
THR 1730.0143
PHE 1740.0122
PRO 1750.0152
ALA 1760.0138
VAL 1770.0136
LEU 1780.0152
GLN 1790.0135
SER 1800.0131
ASP 1830.0146
LEU 1840.0123
TYR 1850.0125
THR 1860.0085
LEU 1870.0094
SER 1880.0078
SER 1890.0110
SER 1900.0112
VAL 1910.0157
THR 1920.0168
VAL 1930.0222
PRO 1940.0253
SER 1950.0270
SER 1960.0320
PRO 1980.0307
ARG 1990.0281
PRO 2000.0295
SER 2020.0347
GLU 2030.0342
THR 2040.0307
VAL 2050.0255
THR 2060.0236
CYS 2080.0195
ASN 2090.0214
VAL 2100.0185
ALA 2110.0199
HIS 2120.0188
PRO 2130.0225
ALA 2140.0211
SER 2150.0184
SER 2160.0206
THR 2170.0182
LYS 2180.0210
VAL 2190.0193
ASP 2200.0216
LYS 2210.0194
LYS 2220.0230
ILE 2230.0215
VAL 2260.0250
PRO 2270.0252
ARG 2280.0244
ASP 2320.0286
CYS 2330.0305
SER 20.0133
VAL 30.0129
LEU 40.0113
SER 50.0125
GLN 60.0107
SER 70.0122
PRO 80.0123
ALA 90.0133
ILE 100.0144
LEU 110.0132
SER 120.0149
ALA 130.0147
SER 140.0163
PRO 150.0161
GLY 160.0156
GLU 170.0141
LYS 180.0113
VAL 190.0103
THR 200.0080
MET 210.0086
THR 220.0081
CYS 230.0086
ARG 240.0116
ALA 250.0126
ARG 260.0164
SER 270.0169
SER 290.0157
VAL 300.0124
SER 310.0121
TYR 320.0087
MET 330.0050
HIS 340.0017
TRP 350.0024
TYR 360.0055
GLN 370.0087
GLN 380.0116
LYS 390.0143
SER 400.0161
GLY 410.0183
SER 420.0157
SER 430.0125
PRO 440.0094
LYS 450.0096
PRO 460.0071
TRP 470.0067
ILE 480.0042
HIS 490.0056
ALA 500.0069
THR 510.0049
SER 520.0049
ASN 530.0071
LEU 540.0077
ALA 550.0101
SER 560.0141
GLY 570.0149
VAL 580.0114
PRO 590.0112
ALA 600.0093
ARG 610.0090
PHE 620.0067
SER 630.0031
GLY 640.0007
SER 650.0040
GLY 660.0075
SER 670.0108
GLY 680.0137
THR 690.0133
SER 700.0109
TYR 710.0070
SER 720.0050
LEU 730.0039
THR 740.0059
ILE 750.0085
SER 760.0091
ARG 770.0125
VAL 780.0131
GLU 790.0148
ALA 800.0156
GLU 810.0146
ASP 820.0131
ALA 830.0142
ALA 840.0129
THR 850.0115
TYR 860.0085
TYR 870.0066
CYS 880.0045
GLN 890.0036
GLN 900.0062
TRP 910.0081
SER 920.0121
SER 930.0135
HIS 940.0119
PRO 950.0097
PRO 960.0068
THR 970.0075
PHE 980.0065
GLY 990.0090
SER 1000.0115
GLY 1010.0099
THR 1020.0109
LYS 1030.0129
LEU 1040.0133
GLU 1050.0147
ILE 1060.0157
LYS 1070.0159
ARG 1080.0155
ALA 1090.0152
ASP 1100.0119
ALA 1110.0090
ALA 1120.0052
PRO 1130.0032
THR 1140.0039
VAL 1150.0035
SER 1160.0075
ILE 1170.0091
PHE 1180.0107
PRO 1190.0140
PRO 1200.0121
SER 1210.0141
SER 1220.0178
GLU 1230.0147
GLN 1240.0104
LEU 1250.0147
THR 1260.0160
SER 1270.0110
GLY 1280.0127
GLY 1290.0102
ALA 1300.0112
SER 1310.0077
VAL 1320.0089
VAL 1330.0046
CYS 1340.0034
PHE 1350.0019
LEU 1360.0025
ASN 1370.0064
ASN 1380.0089
PHE 1390.0087
TYR 1400.0119
PRO 1410.0131
LYS 1420.0130
ASP 1430.0142
ILE 1440.0113
ASN 1450.0124
VAL 1460.0113
LYS 1470.0150
TRP 1480.0153
LYS 1490.0199
ILE 1500.0221
ASP 1510.0266
GLY 1520.0295
SER 1530.0258
GLU 1540.0269
ARG 1550.0235
GLN 1560.0214
ASN 1570.0200
GLY 1580.0158
VAL 1590.0124
LEU 1600.0105
ASN 1610.0098
SER 1620.0108
TRP 1630.0128
THR 1640.0142
ASP 1650.0158
GLN 1660.0153
ASP 1670.0140
SER 1680.0145
LYS 1690.0145
ASP 1700.0144
SER 1710.0147
THR 1720.0131
TYR 1730.0118
SER 1740.0090
MET 1750.0077
SER 1760.0048
SER 1770.0054
THR 1780.0050
LEU 1790.0097
THR 1800.0100
LEU 1810.0145
THR 1820.0162
LYS 1830.0176
ASP 1840.0226
GLU 1850.0232
TYR 1860.0206
GLU 1870.0250
ARG 1880.0287
HIS 1890.0273
ASN 1900.0270
SER 1910.0239
TYR 1920.0185
THR 1930.0157
CYS 1940.0111
GLU 1950.0118
ALA 1960.0089
THR 1970.0110
HIS 1980.0096
LYS 1990.0110
THR 2000.0070
SER 2010.0071
THR 2020.0115
SER 2030.0130
PRO 2040.0121
ILE 2050.0081
VAL 2060.0117
LYS 2070.0119
SER 2080.0162
PHE 2090.0199
ASN 2100.0245
ARG 2110.0246
ASN 2120.0297
GLU 2130.0289
CYS 2140.0286

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.