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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 72  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0486
ILE 4210.0252
PHE 4220.0161
ILE 4230.0119
SER 4240.0227
ASN 4250.0278
ASP 4260.0418
LYS 4270.0177
GLU 4280.0176
SER 4290.0166
ILE 4300.0117
LYS 4310.0070
CYS 4320.0068
PRO 4330.0037
CYS 4340.0038
GLU 4350.0042
PRO 4360.0119
GLU 4370.0160
ARG 4380.0233
ILE 4390.0328
SER 4400.0244
GLU 4410.0275
SER 4420.0436
THR 4430.0422
CYS 4440.0436
ASN 4450.0223
PHE 4460.0119
TYR 4470.0157
VAL 4480.0083
CYS 4490.0058
ASN 4500.0057
CYS 4510.0034
VAL 4520.0033
GLU 4530.0034
LYS 4540.0054
GLU 10.0361
VAL 20.0167
GLN 30.0371
LEU 40.0179
VAL 50.0120
GLU 60.0091
SER 70.0090
GLY 80.0119
GLY 90.0124
GLY 100.0118
LEU 110.0052
VAL 120.0068
LYS 130.0119
PRO 140.0142
GLY 150.0187
GLY 160.0123
SER 170.0137
LEU 180.0147
LYS 190.0110
LEU 200.0076
SER 210.0083
CYS 220.0063
ALA 230.0070
ALA 240.0120
SER 250.0163
GLY 260.0120
PHE 270.0128
ILE 280.0234
PHE 290.0192
SER 300.0191
ASP 310.0179
TYR 320.0145
TYR 330.0123
MET 340.0110
TYR 350.0087
TRP 360.0063
VAL 370.0066
ARG 380.0089
GLN 390.0130
THR 400.0209
PRO 410.0286
GLU 420.0417
LYS 430.0203
ARG 440.0167
LEU 450.0111
GLU 460.0087
TRP 470.0054
VAL 480.0041
ALA 490.0030
THR 500.0077
ILE 510.0110
SER 520.0127
ASP 520.0162
GLY 530.0212
ASN 540.0218
SER 550.0192
TYR 560.0130
THR 570.0120
TYR 580.0038
TYR 590.0050
VAL 600.0067
ASP 610.0235
SER 620.0195
VAL 630.0118
LYS 640.0157
GLY 650.0146
ARG 660.0127
PHE 670.0078
THR 680.0068
ILE 690.0093
SER 700.0273
ARG 710.0194
ASP 720.0210
ASN 730.0206
ALA 740.0395
LYS 750.0457
ASN 760.0142
ASN 770.0137
LEU 780.0127
TYR 790.0137
LEU 800.0133
GLN 810.0137
MET 820.0151
SER 820.0149
SER 820.0135
LEU 820.0094
LYS 830.0069
SER 840.0048
GLU 850.0091
ASP 860.0124
THR 870.0176
ALA 880.0151
ILE 890.0125
TYR 900.0091
TYR 910.0097
CYS 920.0101
ALA 930.0125
ARG 940.0143
ASP 950.0094
GLY 960.0108
PRO 970.0145
THR 980.0150
ASP 990.0178
SER 1000.0075
SER 1000.0025
GLY 1000.0026
TYR 1000.0033
GLY 1000.0029
GLY 1000.0036
PHE 1000.0087
GLY 1010.0107
TYR 1020.0155
TRP 1030.0117
GLY 1040.0115
GLN 1050.0093
GLY 1060.0103
THR 1070.0119
LEU 1080.0132
VAL 1090.0132
THR 1100.0096
VAL 1110.0068
SER 1120.0116
GLU 1130.0177
ALA 1140.0193
LYS 1150.0320
THR 1160.0298
THR 1170.0196
PRO 1180.0094
PRO 1190.0091
SER 1200.0107
VAL 1210.0062
TYR 1220.0052
PRO 1230.0036
LEU 1240.0038
ALA 1250.0042
PRO 1260.0051
GLY 1270.0104
SER 1280.0231
ALA 1290.0407
ALA 1300.0141
GLN 1330.0174
THR 1340.0043
ASN 1350.0127
SER 1360.0199
MET 1370.0202
VAL 1380.0138
THR 1390.0061
LEU 1400.0059
GLY 1410.0059
CYS 1420.0013
LEU 1430.0038
VAL 1440.0051
LYS 1450.0081
GLY 1460.0062
TYR 1470.0084
PHE 1480.0144
PRO 1490.0185
GLU 1500.0213
PRO 1510.0206
VAL 1520.0140
THR 1530.0180
VAL 1540.0101
THR 1560.0035
TRP 1570.0031
ASN 1620.0140
SER 1630.0281
GLY 1640.0271
SER 1650.0150
LEU 1660.0142
SER 1670.0335
SER 1680.0392
GLY 1690.0177
VAL 1710.0021
HIS 1720.0027
THR 1730.0003
PHE 1740.0056
PRO 1750.0140
ALA 1760.0204
VAL 1770.0297
LEU 1780.0281
GLN 1790.0358
SER 1800.0486
ASP 1830.0036
LEU 1840.0052
TYR 1850.0138
THR 1860.0113
LEU 1870.0082
SER 1880.0056
SER 1890.0034
SER 1900.0032
VAL 1910.0032
THR 1920.0150
VAL 1930.0146
PRO 1940.0150
SER 1950.0195
SER 1960.0218
PRO 1980.0189
ARG 1990.0216
PRO 2000.0210
SER 2020.0308
GLU 2030.0188
THR 2040.0148
VAL 2050.0114
THR 2060.0129
CYS 2080.0086
ASN 2090.0128
VAL 2100.0163
ALA 2110.0273
HIS 2120.0175
PRO 2130.0177
ALA 2140.0352
SER 2150.0197
SER 2160.0053
THR 2170.0280
LYS 2180.0474
VAL 2190.0386
ASP 2200.0139
LYS 2210.0073
LYS 2220.0083
ILE 2230.0139
VAL 2260.0267
PRO 2270.0226
ARG 2280.0153
ASP 2320.0410
CYS 2330.0270
SER 20.0029
VAL 30.0017
LEU 40.0028
SER 50.0037
GLN 60.0045
SER 70.0048
PRO 80.0072
ALA 90.0068
ILE 100.0070
LEU 110.0099
SER 120.0091
ALA 130.0079
SER 140.0075
PRO 150.0037
GLY 160.0071
GLU 170.0056
LYS 180.0098
VAL 190.0110
THR 200.0055
MET 210.0053
THR 220.0042
CYS 230.0038
ARG 240.0037
ALA 250.0033
ARG 260.0056
SER 270.0066
SER 290.0043
VAL 300.0032
SER 310.0028
TYR 320.0006
MET 330.0013
HIS 340.0022
TRP 350.0023
TYR 360.0030
GLN 370.0035
GLN 380.0050
LYS 390.0040
SER 400.0105
GLY 410.0358
SER 420.0211
SER 430.0111
PRO 440.0067
LYS 450.0072
PRO 460.0085
TRP 470.0076
ILE 480.0072
HIS 490.0067
ALA 500.0048
THR 510.0048
SER 520.0065
ASN 530.0077
LEU 540.0069
ALA 550.0084
SER 560.0297
GLY 570.0187
VAL 580.0068
PRO 590.0060
ALA 600.0078
ARG 610.0112
PHE 620.0080
SER 630.0082
GLY 640.0087
SER 650.0062
GLY 660.0049
SER 670.0041
GLY 680.0050
THR 690.0046
SER 700.0045
TYR 710.0043
SER 720.0049
LEU 730.0053
THR 740.0135
ILE 750.0109
SER 760.0119
ARG 770.0140
VAL 780.0063
GLU 790.0030
ALA 800.0058
GLU 810.0075
ASP 820.0079
ALA 830.0051
ALA 840.0026
THR 850.0059
TYR 860.0036
TYR 870.0046
CYS 880.0058
GLN 890.0024
GLN 900.0022
TRP 910.0027
SER 920.0032
SER 930.0034
HIS 940.0037
PRO 950.0033
PRO 960.0034
THR 970.0035
PHE 980.0073
GLY 990.0097
SER 1000.0117
GLY 1010.0079
THR 1020.0074
LYS 1030.0064
LEU 1040.0066
GLU 1050.0067
ILE 1060.0065
LYS 1070.0098
ARG 1080.0102
ALA 1090.0115
ASP 1100.0039
ALA 1110.0035
ALA 1120.0064
PRO 1130.0069
THR 1140.0080
VAL 1150.0091
SER 1160.0060
ILE 1170.0069
PHE 1180.0051
PRO 1190.0061
PRO 1200.0060
SER 1210.0069
SER 1220.0077
GLU 1230.0087
GLN 1240.0088
LEU 1250.0100
THR 1260.0156
SER 1270.0136
GLY 1280.0130
GLY 1290.0102
ALA 1300.0080
SER 1310.0077
VAL 1320.0082
VAL 1330.0088
CYS 1340.0084
PHE 1350.0075
LEU 1360.0092
ASN 1370.0092
ASN 1380.0086
PHE 1390.0084
TYR 1400.0039
PRO 1410.0033
LYS 1420.0062
ASP 1430.0090
ILE 1440.0106
ASN 1450.0169
VAL 1460.0089
LYS 1470.0064
TRP 1480.0026
LYS 1490.0051
ILE 1500.0099
ASP 1510.0129
GLY 1520.0195
SER 1530.0045
GLU 1540.0236
ARG 1550.0183
GLN 1560.0145
ASN 1570.0107
GLY 1580.0146
VAL 1590.0122
LEU 1600.0123
ASN 1610.0119
SER 1620.0098
TRP 1630.0062
THR 1640.0022
ASP 1650.0017
GLN 1660.0038
ASP 1670.0066
SER 1680.0092
LYS 1690.0121
ASP 1700.0115
SER 1710.0077
THR 1720.0072
TYR 1730.0060
SER 1740.0078
MET 1750.0091
SER 1760.0089
SER 1770.0102
THR 1780.0107
LEU 1790.0107
THR 1800.0092
LEU 1810.0054
THR 1820.0119
LYS 1830.0132
ASP 1840.0151
GLU 1850.0090
TYR 1860.0050
GLU 1870.0050
ARG 1880.0083
HIS 1890.0049
ASN 1900.0064
SER 1910.0112
TYR 1920.0070
THR 1930.0059
CYS 1940.0098
GLU 1950.0107
ALA 1960.0146
THR 1970.0197
HIS 1980.0119
LYS 1990.0123
THR 2000.0191
SER 2010.0345
THR 2020.0453
SER 2030.0390
PRO 2040.0314
ILE 2050.0197
VAL 2060.0048
LYS 2070.0065
SER 2080.0066
PHE 2090.0083
ASN 2100.0063
ARG 2110.0037
ASN 2120.0162
GLU 2130.0200
CYS 2140.0265

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.