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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 74  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0558
ILE 4210.0144
PHE 4220.0119
ILE 4230.0087
SER 4240.0105
ASN 4250.0106
ASP 4260.0097
LYS 4270.0028
GLU 4280.0101
SER 4290.0065
ILE 4300.0089
LYS 4310.0118
CYS 4320.0091
PRO 4330.0071
CYS 4340.0030
GLU 4350.0041
PRO 4360.0117
GLU 4370.0110
ARG 4380.0095
ILE 4390.0196
SER 4400.0225
GLU 4410.0328
SER 4420.0489
THR 4430.0202
CYS 4440.0402
ASN 4450.0125
PHE 4460.0090
TYR 4470.0042
VAL 4480.0093
CYS 4490.0108
ASN 4500.0137
CYS 4510.0124
VAL 4520.0191
GLU 4530.0210
LYS 4540.0509
GLU 10.0439
VAL 20.0153
GLN 30.0176
LEU 40.0160
VAL 50.0180
GLU 60.0217
SER 70.0192
GLY 80.0147
GLY 90.0126
GLY 100.0060
LEU 110.0033
VAL 120.0064
LYS 130.0203
PRO 140.0116
GLY 150.0307
GLY 160.0269
SER 170.0181
LEU 180.0089
LYS 190.0081
LEU 200.0121
SER 210.0153
CYS 220.0177
ALA 230.0133
ALA 240.0101
SER 250.0095
GLY 260.0120
PHE 270.0114
ILE 280.0144
PHE 290.0096
SER 300.0148
ASP 310.0121
TYR 320.0125
TYR 330.0126
MET 340.0094
TYR 350.0112
TRP 360.0122
VAL 370.0092
ARG 380.0065
GLN 390.0060
THR 400.0061
PRO 410.0040
GLU 420.0063
LYS 430.0043
ARG 440.0087
LEU 450.0093
GLU 460.0031
TRP 470.0019
VAL 480.0026
ALA 490.0058
THR 500.0056
ILE 510.0076
SER 520.0150
ASP 520.0181
GLY 530.0265
ASN 540.0319
SER 550.0227
TYR 560.0197
THR 570.0147
TYR 580.0054
TYR 590.0046
VAL 600.0082
ASP 610.0452
SER 620.0383
VAL 630.0151
LYS 640.0240
GLY 650.0165
ARG 660.0070
PHE 670.0051
THR 680.0062
ILE 690.0069
SER 700.0133
ARG 710.0039
ASP 720.0082
ASN 730.0182
ALA 740.0391
LYS 750.0377
ASN 760.0104
ASN 770.0082
LEU 780.0092
TYR 790.0102
LEU 800.0094
GLN 810.0073
MET 820.0089
SER 820.0169
SER 820.0243
LEU 820.0180
LYS 830.0211
SER 840.0174
GLU 850.0202
ASP 860.0097
THR 870.0025
ALA 880.0064
ILE 890.0112
TYR 900.0128
TYR 910.0175
CYS 920.0172
ALA 930.0157
ARG 940.0206
ASP 950.0194
GLY 960.0240
PRO 970.0496
THR 980.0558
ASP 990.0528
SER 1000.0224
SER 1000.0185
GLY 1000.0152
TYR 1000.0117
GLY 1000.0057
GLY 1000.0088
PHE 1000.0131
GLY 1010.0185
TYR 1020.0230
TRP 1030.0155
GLY 1040.0159
GLN 1050.0152
GLY 1060.0182
THR 1070.0157
LEU 1080.0115
VAL 1090.0078
THR 1100.0067
VAL 1110.0086
SER 1120.0213
GLU 1130.0448
ALA 1140.0257
LYS 1150.0171
THR 1160.0132
THR 1170.0140
PRO 1180.0070
PRO 1190.0073
SER 1200.0098
VAL 1210.0024
TYR 1220.0034
PRO 1230.0065
LEU 1240.0056
ALA 1250.0074
PRO 1260.0098
GLY 1270.0145
SER 1280.0258
ALA 1290.0391
ALA 1300.0237
GLN 1330.0325
THR 1340.0221
ASN 1350.0167
SER 1360.0046
MET 1370.0091
VAL 1380.0115
THR 1390.0070
LEU 1400.0050
GLY 1410.0051
CYS 1420.0043
LEU 1430.0033
VAL 1440.0046
LYS 1450.0095
GLY 1460.0094
TYR 1470.0080
PHE 1480.0045
PRO 1490.0036
GLU 1500.0018
PRO 1510.0022
VAL 1520.0032
THR 1530.0034
VAL 1540.0038
THR 1560.0076
TRP 1570.0064
ASN 1620.0146
SER 1630.0227
GLY 1640.0154
SER 1650.0128
LEU 1660.0096
SER 1670.0248
SER 1680.0448
GLY 1690.0215
VAL 1710.0078
HIS 1720.0066
THR 1730.0069
PHE 1740.0035
PRO 1750.0058
ALA 1760.0071
VAL 1770.0159
LEU 1780.0156
GLN 1790.0245
SER 1800.0342
ASP 1830.0073
LEU 1840.0109
TYR 1850.0117
THR 1860.0086
LEU 1870.0053
SER 1880.0032
SER 1890.0044
SER 1900.0051
VAL 1910.0052
THR 1920.0102
VAL 1930.0103
PRO 1940.0112
SER 1950.0096
SER 1960.0109
PRO 1980.0113
ARG 1990.0098
PRO 2000.0083
SER 2020.0032
GLU 2030.0067
THR 2040.0070
VAL 2050.0071
THR 2060.0061
CYS 2080.0057
ASN 2090.0044
VAL 2100.0049
ALA 2110.0050
HIS 2120.0010
PRO 2130.0044
ALA 2140.0062
SER 2150.0068
SER 2160.0054
THR 2170.0035
LYS 2180.0072
VAL 2190.0091
ASP 2200.0106
LYS 2210.0115
LYS 2220.0133
ILE 2230.0117
VAL 2260.0241
PRO 2270.0228
ARG 2280.0160
ASP 2320.0270
CYS 2330.0171
SER 20.0104
VAL 30.0094
LEU 40.0089
SER 50.0106
GLN 60.0093
SER 70.0103
PRO 80.0129
ALA 90.0146
ILE 100.0134
LEU 110.0125
SER 120.0118
ALA 130.0102
SER 140.0117
PRO 150.0165
GLY 160.0240
GLU 170.0188
LYS 180.0188
VAL 190.0182
THR 200.0050
MET 210.0066
THR 220.0050
CYS 230.0070
ARG 240.0120
ALA 250.0087
ARG 260.0115
SER 270.0193
SER 290.0170
VAL 300.0117
SER 310.0127
TYR 320.0008
MET 330.0002
HIS 340.0018
TRP 350.0027
TYR 360.0021
GLN 370.0032
GLN 380.0041
LYS 390.0024
SER 400.0037
GLY 410.0135
SER 420.0097
SER 430.0104
PRO 440.0054
LYS 450.0025
PRO 460.0029
TRP 470.0048
ILE 480.0021
HIS 490.0040
ALA 500.0037
THR 510.0017
SER 520.0050
ASN 530.0083
LEU 540.0064
ALA 550.0072
SER 560.0189
GLY 570.0206
VAL 580.0237
PRO 590.0281
ALA 600.0278
ARG 610.0213
PHE 620.0164
SER 630.0145
GLY 640.0112
SER 650.0046
GLY 660.0123
SER 670.0223
GLY 680.0234
THR 690.0204
SER 700.0191
TYR 710.0071
SER 720.0051
LEU 730.0069
THR 740.0222
ILE 750.0168
SER 760.0168
ARG 770.0229
VAL 780.0088
GLU 790.0170
ALA 800.0172
GLU 810.0192
ASP 820.0191
ALA 830.0112
ALA 840.0096
THR 850.0111
TYR 860.0078
TYR 870.0078
CYS 880.0075
GLN 890.0046
GLN 900.0036
TRP 910.0043
SER 920.0096
SER 930.0139
HIS 940.0134
PRO 950.0126
PRO 960.0081
THR 970.0097
PHE 980.0093
GLY 990.0096
SER 1000.0097
GLY 1010.0125
THR 1020.0120
LYS 1030.0112
LEU 1040.0132
GLU 1050.0139
ILE 1060.0129
LYS 1070.0133
ARG 1080.0130
ALA 1090.0120
ASP 1100.0134
ALA 1110.0132
ALA 1120.0138
PRO 1130.0057
THR 1140.0057
VAL 1150.0063
SER 1160.0077
ILE 1170.0079
PHE 1180.0080
PRO 1190.0088
PRO 1200.0071
SER 1210.0051
SER 1220.0117
GLU 1230.0083
GLN 1240.0037
LEU 1250.0066
THR 1260.0066
SER 1270.0042
GLY 1280.0060
GLY 1290.0055
ALA 1300.0056
SER 1310.0065
VAL 1320.0070
VAL 1330.0078
CYS 1340.0068
PHE 1350.0054
LEU 1360.0043
ASN 1370.0021
ASN 1380.0058
PHE 1390.0035
TYR 1400.0031
PRO 1410.0037
LYS 1420.0082
ASP 1430.0141
ILE 1440.0047
ASN 1450.0048
VAL 1460.0039
LYS 1470.0022
TRP 1480.0020
LYS 1490.0057
ILE 1500.0092
ASP 1510.0096
GLY 1520.0132
SER 1530.0095
GLU 1540.0217
ARG 1550.0120
GLN 1560.0097
ASN 1570.0079
GLY 1580.0019
VAL 1590.0049
LEU 1600.0048
ASN 1610.0063
SER 1620.0045
TRP 1630.0057
THR 1640.0052
ASP 1650.0094
GLN 1660.0117
ASP 1670.0107
SER 1680.0165
LYS 1690.0493
ASP 1700.0194
SER 1710.0195
THR 1720.0147
TYR 1730.0076
SER 1740.0038
MET 1750.0034
SER 1760.0052
SER 1770.0065
THR 1780.0072
LEU 1790.0058
THR 1800.0048
LEU 1810.0028
THR 1820.0050
LYS 1830.0041
ASP 1840.0041
GLU 1850.0020
TYR 1860.0021
GLU 1870.0038
ARG 1880.0057
HIS 1890.0048
ASN 1900.0057
SER 1910.0085
TYR 1920.0068
THR 1930.0061
CYS 1940.0037
GLU 1950.0039
ALA 1960.0056
THR 1970.0094
HIS 1980.0097
LYS 1990.0219
THR 2000.0203
SER 2010.0108
THR 2020.0184
SER 2030.0293
PRO 2040.0192
ILE 2050.0111
VAL 2060.0081
LYS 2070.0084
SER 2080.0090
PHE 2090.0053
ASN 2100.0047
ARG 2110.0038
ASN 2120.0176
GLU 2130.0193
CYS 2140.0242

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.