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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 75  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1208
ILE 4210.0169
PHE 4220.0175
ILE 4230.0186
SER 4240.0160
ASN 4250.0124
ASP 4260.0082
LYS 4270.0047
GLU 4280.0061
SER 4290.0085
ILE 4300.0086
LYS 4310.0096
CYS 4320.0117
PRO 4330.0095
CYS 4340.0098
GLU 4350.0098
PRO 4360.0103
GLU 4370.0124
ARG 4380.0098
ILE 4390.0077
SER 4400.0036
GLU 4410.0040
SER 4420.0076
THR 4430.0126
CYS 4440.0125
ASN 4450.0052
PHE 4460.0086
TYR 4470.0091
VAL 4480.0107
CYS 4490.0141
ASN 4500.0149
CYS 4510.0204
VAL 4520.0375
GLU 4530.0407
LYS 4540.1208
GLU 10.0118
VAL 20.0132
GLN 30.0126
LEU 40.0089
VAL 50.0073
GLU 60.0064
SER 70.0033
GLY 80.0019
GLY 90.0031
GLY 100.0050
LEU 110.0047
VAL 120.0067
LYS 130.0199
PRO 140.0073
GLY 150.0042
GLY 160.0067
SER 170.0070
LEU 180.0058
LYS 190.0075
LEU 200.0049
SER 210.0035
CYS 220.0045
ALA 230.0043
ALA 240.0057
SER 250.0060
GLY 260.0081
PHE 270.0105
ILE 280.0150
PHE 290.0115
SER 300.0110
ASP 310.0089
TYR 320.0074
TYR 330.0055
MET 340.0023
TYR 350.0015
TRP 360.0020
VAL 370.0070
ARG 380.0063
GLN 390.0056
THR 400.0117
PRO 410.0139
GLU 420.0048
LYS 430.0051
ARG 440.0129
LEU 450.0128
GLU 460.0096
TRP 470.0095
VAL 480.0093
ALA 490.0060
THR 500.0036
ILE 510.0028
SER 520.0046
ASP 520.0096
GLY 530.0165
ASN 540.0184
SER 550.0135
TYR 560.0093
THR 570.0102
TYR 580.0096
TYR 590.0108
VAL 600.0117
ASP 610.0208
SER 620.0117
VAL 630.0064
LYS 640.0121
GLY 650.0158
ARG 660.0121
PHE 670.0054
THR 680.0055
ILE 690.0052
SER 700.0136
ARG 710.0098
ASP 720.0111
ASN 730.0112
ALA 740.0248
LYS 750.0280
ASN 760.0083
ASN 770.0075
LEU 780.0064
TYR 790.0073
LEU 800.0078
GLN 810.0091
MET 820.0093
SER 820.0120
SER 820.0140
LEU 820.0107
LYS 830.0129
SER 840.0126
GLU 850.0145
ASP 860.0082
THR 870.0080
ALA 880.0078
ILE 890.0073
TYR 900.0060
TYR 910.0066
CYS 920.0076
ALA 930.0067
ARG 940.0065
ASP 950.0039
GLY 960.0085
PRO 970.0189
THR 980.0243
ASP 990.0217
SER 1000.0096
SER 1000.0057
GLY 1000.0049
TYR 1000.0070
GLY 1000.0058
GLY 1000.0027
PHE 1000.0042
GLY 1010.0063
TYR 1020.0103
TRP 1030.0100
GLY 1040.0108
GLN 1050.0084
GLY 1060.0077
THR 1070.0073
LEU 1080.0067
VAL 1090.0041
THR 1100.0028
VAL 1110.0021
SER 1120.0192
GLU 1130.0296
ALA 1140.0115
LYS 1150.0186
THR 1160.0171
THR 1170.0136
PRO 1180.0148
PRO 1190.0123
SER 1200.0164
VAL 1210.0123
TYR 1220.0102
PRO 1230.0094
LEU 1240.0043
ALA 1250.0034
PRO 1260.0033
GLY 1270.0076
SER 1280.0219
ALA 1290.0432
ALA 1300.0065
GLN 1330.0269
THR 1340.0136
ASN 1350.0339
SER 1360.0369
MET 1370.0296
VAL 1380.0173
THR 1390.0083
LEU 1400.0074
GLY 1410.0068
CYS 1420.0076
LEU 1430.0091
VAL 1440.0103
LYS 1450.0096
GLY 1460.0054
TYR 1470.0070
PHE 1480.0104
PRO 1490.0086
GLU 1500.0030
PRO 1510.0030
VAL 1520.0081
THR 1530.0157
VAL 1540.0141
THR 1560.0151
TRP 1570.0090
ASN 1620.0345
SER 1630.0431
GLY 1640.0247
SER 1650.0329
LEU 1660.0208
SER 1670.0233
SER 1680.0583
GLY 1690.0300
VAL 1710.0075
HIS 1720.0088
THR 1730.0060
PHE 1740.0023
PRO 1750.0022
ALA 1760.0023
VAL 1770.0071
LEU 1780.0066
GLN 1790.0081
SER 1800.0116
ASP 1830.0111
LEU 1840.0067
TYR 1850.0016
THR 1860.0072
LEU 1870.0065
SER 1880.0057
SER 1890.0028
SER 1900.0034
VAL 1910.0082
THR 1920.0170
VAL 1930.0114
PRO 1940.0118
SER 1950.0172
SER 1960.0143
PRO 1980.0096
ARG 1990.0104
PRO 2000.0099
SER 2020.0209
GLU 2030.0117
THR 2040.0075
VAL 2050.0084
THR 2060.0065
CYS 2080.0086
ASN 2090.0118
VAL 2100.0165
ALA 2110.0222
HIS 2120.0163
PRO 2130.0219
ALA 2140.0255
SER 2150.0276
SER 2160.0357
THR 2170.0207
LYS 2180.0218
VAL 2190.0227
ASP 2200.0088
LYS 2210.0082
LYS 2220.0050
ILE 2230.0026
VAL 2260.0089
PRO 2270.0058
ARG 2280.0013
ASP 2320.0188
CYS 2330.0119
SER 20.0052
VAL 30.0059
LEU 40.0103
SER 50.0151
GLN 60.0135
SER 70.0170
PRO 80.0266
ALA 90.0270
ILE 100.0228
LEU 110.0094
SER 120.0066
ALA 130.0068
SER 140.0196
PRO 150.0218
GLY 160.0264
GLU 170.0212
LYS 180.0184
VAL 190.0222
THR 200.0185
MET 210.0108
THR 220.0081
CYS 230.0111
ARG 240.0135
ALA 250.0184
ARG 260.0233
SER 270.0231
SER 290.0179
VAL 300.0157
SER 310.0181
TYR 320.0064
MET 330.0065
HIS 340.0067
TRP 350.0046
TYR 360.0050
GLN 370.0040
GLN 380.0055
LYS 390.0140
SER 400.0294
GLY 410.0716
SER 420.0399
SER 430.0036
PRO 440.0035
LYS 450.0047
PRO 460.0062
TRP 470.0074
ILE 480.0062
HIS 490.0048
ALA 500.0052
THR 510.0025
SER 520.0044
ASN 530.0079
LEU 540.0090
ALA 550.0095
SER 560.0716
GLY 570.0316
VAL 580.0204
PRO 590.0290
ALA 600.0302
ARG 610.0199
PHE 620.0164
SER 630.0165
GLY 640.0117
SER 650.0110
GLY 660.0085
SER 670.0183
GLY 680.0231
THR 690.0191
SER 700.0146
TYR 710.0059
SER 720.0040
LEU 730.0087
THR 740.0208
ILE 750.0146
SER 760.0176
ARG 770.0138
VAL 780.0067
GLU 790.0165
ALA 800.0132
GLU 810.0151
ASP 820.0114
ALA 830.0056
ALA 840.0044
THR 850.0061
TYR 860.0049
TYR 870.0075
CYS 880.0085
GLN 890.0120
GLN 900.0089
TRP 910.0079
SER 920.0138
SER 930.0231
HIS 940.0197
PRO 950.0197
PRO 960.0114
THR 970.0138
PHE 980.0131
GLY 990.0123
SER 1000.0125
GLY 1010.0135
THR 1020.0118
LYS 1030.0104
LEU 1040.0054
GLU 1050.0046
ILE 1060.0056
LYS 1070.0053
ARG 1080.0081
ALA 1090.0132
ASP 1100.0122
ALA 1110.0106
ALA 1120.0104
PRO 1130.0093
THR 1140.0102
VAL 1150.0100
SER 1160.0047
ILE 1170.0046
PHE 1180.0045
PRO 1190.0039
PRO 1200.0040
SER 1210.0051
SER 1220.0061
GLU 1230.0098
GLN 1240.0080
LEU 1250.0082
THR 1260.0141
SER 1270.0174
GLY 1280.0130
GLY 1290.0094
ALA 1300.0051
SER 1310.0017
VAL 1320.0024
VAL 1330.0036
CYS 1340.0054
PHE 1350.0059
LEU 1360.0069
ASN 1370.0116
ASN 1380.0121
PHE 1390.0111
TYR 1400.0121
PRO 1410.0145
LYS 1420.0168
ASP 1430.0162
ILE 1440.0106
ASN 1450.0120
VAL 1460.0035
LYS 1470.0028
TRP 1480.0038
LYS 1490.0108
ILE 1500.0107
ASP 1510.0183
GLY 1520.0317
SER 1530.0318
GLU 1540.0332
ARG 1550.0198
GLN 1560.0138
ASN 1570.0418
GLY 1580.0130
VAL 1590.0101
LEU 1600.0100
ASN 1610.0045
SER 1620.0045
TRP 1630.0063
THR 1640.0085
ASP 1650.0113
GLN 1660.0085
ASP 1670.0064
SER 1680.0131
LYS 1690.0262
ASP 1700.0134
SER 1710.0123
THR 1720.0113
TYR 1730.0106
SER 1740.0100
MET 1750.0087
SER 1760.0042
SER 1770.0038
THR 1780.0047
LEU 1790.0013
THR 1800.0030
LEU 1810.0051
THR 1820.0108
LYS 1830.0102
ASP 1840.0100
GLU 1850.0090
TYR 1860.0080
GLU 1870.0083
ARG 1880.0145
HIS 1890.0100
ASN 1900.0080
SER 1910.0052
TYR 1920.0049
THR 1930.0051
CYS 1940.0041
GLU 1950.0054
ALA 1960.0086
THR 1970.0128
HIS 1980.0095
LYS 1990.0091
THR 2000.0067
SER 2010.0034
THR 2020.0034
SER 2030.0186
PRO 2040.0163
ILE 2050.0122
VAL 2060.0097
LYS 2070.0085
SER 2080.0067
PHE 2090.0038
ASN 2100.0065
ARG 2110.0091
ASN 2120.0299
GLU 2130.0203
CYS 2140.0260

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.