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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 76  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0801
ILE 4210.0250
PHE 4220.0230
ILE 4230.0233
SER 4240.0233
ASN 4250.0272
ASP 4260.0225
LYS 4270.0088
GLU 4280.0129
SER 4290.0078
ILE 4300.0103
LYS 4310.0142
CYS 4320.0123
PRO 4330.0091
CYS 4340.0084
GLU 4350.0083
PRO 4360.0134
GLU 4370.0169
ARG 4380.0155
ILE 4390.0118
SER 4400.0101
GLU 4410.0073
SER 4420.0155
THR 4430.0267
CYS 4440.0268
ASN 4450.0120
PHE 4460.0060
TYR 4470.0048
VAL 4480.0076
CYS 4490.0103
ASN 4500.0124
CYS 4510.0119
VAL 4520.0118
GLU 4530.0109
LYS 4540.0187
GLU 10.0402
VAL 20.0152
GLN 30.0267
LEU 40.0052
VAL 50.0034
GLU 60.0064
SER 70.0137
GLY 80.0120
GLY 90.0108
GLY 100.0122
LEU 110.0122
VAL 120.0098
LYS 130.0109
PRO 140.0094
GLY 150.0132
GLY 160.0125
SER 170.0060
LEU 180.0079
LYS 190.0109
LEU 200.0103
SER 210.0117
CYS 220.0078
ALA 230.0040
ALA 240.0071
SER 250.0121
GLY 260.0084
PHE 270.0071
ILE 280.0114
PHE 290.0088
SER 300.0115
ASP 310.0088
TYR 320.0073
TYR 330.0063
MET 340.0044
TYR 350.0056
TRP 360.0076
VAL 370.0104
ARG 380.0102
GLN 390.0091
THR 400.0156
PRO 410.0126
GLU 420.0118
LYS 430.0058
ARG 440.0134
LEU 450.0121
GLU 460.0100
TRP 470.0095
VAL 480.0117
ALA 490.0081
THR 500.0052
ILE 510.0030
SER 520.0062
ASP 520.0111
GLY 530.0173
ASN 540.0211
SER 550.0148
TYR 560.0119
THR 570.0064
TYR 580.0068
TYR 590.0096
VAL 600.0102
ASP 610.0207
SER 620.0168
VAL 630.0127
LYS 640.0175
GLY 650.0162
ARG 660.0114
PHE 670.0076
THR 680.0087
ILE 690.0086
SER 700.0101
ARG 710.0089
ASP 720.0122
ASN 730.0166
ALA 740.0243
LYS 750.0156
ASN 760.0057
ASN 770.0062
LEU 780.0063
TYR 790.0110
LEU 800.0084
GLN 810.0080
MET 820.0039
SER 820.0048
SER 820.0110
LEU 820.0062
LYS 830.0079
SER 840.0061
GLU 850.0103
ASP 860.0064
THR 870.0070
ALA 880.0089
ILE 890.0085
TYR 900.0081
TYR 910.0070
CYS 920.0074
ALA 930.0072
ARG 940.0124
ASP 950.0116
GLY 960.0142
PRO 970.0304
THR 980.0417
ASP 990.0388
SER 1000.0152
SER 1000.0145
GLY 1000.0138
TYR 1000.0100
GLY 1000.0055
GLY 1000.0050
PHE 1000.0069
GLY 1010.0098
TYR 1020.0129
TRP 1030.0074
GLY 1040.0066
GLN 1050.0054
GLY 1060.0087
THR 1070.0083
LEU 1080.0072
VAL 1090.0111
THR 1100.0111
VAL 1110.0086
SER 1120.0234
GLU 1130.0281
ALA 1140.0190
LYS 1150.0155
THR 1160.0082
THR 1170.0045
PRO 1180.0085
PRO 1190.0089
SER 1200.0098
VAL 1210.0110
TYR 1220.0104
PRO 1230.0106
LEU 1240.0022
ALA 1250.0040
PRO 1260.0034
GLY 1270.0065
SER 1280.0124
ALA 1290.0386
ALA 1300.0064
GLN 1330.0043
THR 1340.0021
ASN 1350.0044
SER 1360.0094
MET 1370.0065
VAL 1380.0071
THR 1390.0117
LEU 1400.0099
GLY 1410.0088
CYS 1420.0064
LEU 1430.0033
VAL 1440.0026
LYS 1450.0034
GLY 1460.0022
TYR 1470.0009
PHE 1480.0069
PRO 1490.0076
GLU 1500.0075
PRO 1510.0074
VAL 1520.0073
THR 1530.0123
VAL 1540.0171
THR 1560.0157
TRP 1570.0091
ASN 1620.0110
SER 1630.0116
GLY 1640.0201
SER 1650.0336
LEU 1660.0225
SER 1670.0369
SER 1680.0330
GLY 1690.0297
VAL 1710.0192
HIS 1720.0117
THR 1730.0109
PHE 1740.0048
PRO 1750.0041
ALA 1760.0051
VAL 1770.0071
LEU 1780.0063
GLN 1790.0195
SER 1800.0197
ASP 1830.0070
LEU 1840.0069
TYR 1850.0057
THR 1860.0077
LEU 1870.0044
SER 1880.0052
SER 1890.0103
SER 1900.0131
VAL 1910.0157
THR 1920.0180
VAL 1930.0101
PRO 1940.0092
SER 1950.0105
SER 1960.0227
PRO 1980.0052
ARG 1990.0019
PRO 2000.0094
SER 2020.0143
GLU 2030.0098
THR 2040.0136
VAL 2050.0105
THR 2060.0158
CYS 2080.0193
ASN 2090.0203
VAL 2100.0221
ALA 2110.0155
HIS 2120.0078
PRO 2130.0127
ALA 2140.0153
SER 2150.0142
SER 2160.0262
THR 2170.0159
LYS 2180.0214
VAL 2190.0242
ASP 2200.0212
LYS 2210.0148
LYS 2220.0123
ILE 2230.0099
VAL 2260.0062
PRO 2270.0073
ARG 2280.0063
ASP 2320.0405
CYS 2330.0121
SER 20.0194
VAL 30.0194
LEU 40.0192
SER 50.0187
GLN 60.0164
SER 70.0176
PRO 80.0130
ALA 90.0081
ILE 100.0128
LEU 110.0143
SER 120.0136
ALA 130.0137
SER 140.0156
PRO 150.0156
GLY 160.0144
GLU 170.0134
LYS 180.0156
VAL 190.0157
THR 200.0108
MET 210.0078
THR 220.0085
CYS 230.0163
ARG 240.0194
ALA 250.0206
ARG 260.0246
SER 270.0213
SER 290.0209
VAL 300.0128
SER 310.0052
TYR 320.0034
MET 330.0034
HIS 340.0021
TRP 350.0012
TYR 360.0012
GLN 370.0016
GLN 380.0009
LYS 390.0083
SER 400.0154
GLY 410.0390
SER 420.0216
SER 430.0028
PRO 440.0024
LYS 450.0048
PRO 460.0067
TRP 470.0074
ILE 480.0108
HIS 490.0119
ALA 500.0110
THR 510.0107
SER 520.0166
ASN 530.0219
LEU 540.0170
ALA 550.0109
SER 560.0188
GLY 570.0132
VAL 580.0182
PRO 590.0228
ALA 600.0229
ARG 610.0193
PHE 620.0115
SER 630.0124
GLY 640.0144
SER 650.0120
GLY 660.0079
SER 670.0057
GLY 680.0138
THR 690.0190
SER 700.0181
TYR 710.0070
SER 720.0057
LEU 730.0037
THR 740.0094
ILE 750.0094
SER 760.0121
ARG 770.0164
VAL 780.0125
GLU 790.0149
ALA 800.0091
GLU 810.0094
ASP 820.0096
ALA 830.0043
ALA 840.0036
THR 850.0035
TYR 860.0035
TYR 870.0045
CYS 880.0061
GLN 890.0053
GLN 900.0048
TRP 910.0048
SER 920.0050
SER 930.0052
HIS 940.0063
PRO 950.0110
PRO 960.0076
THR 970.0093
PHE 980.0102
GLY 990.0124
SER 1000.0123
GLY 1010.0061
THR 1020.0068
LYS 1030.0079
LEU 1040.0098
GLU 1050.0090
ILE 1060.0086
LYS 1070.0102
ARG 1080.0116
ALA 1090.0148
ASP 1100.0175
ALA 1110.0133
ALA 1120.0082
PRO 1130.0123
THR 1140.0116
VAL 1150.0108
SER 1160.0029
ILE 1170.0033
PHE 1180.0050
PRO 1190.0143
PRO 1200.0170
SER 1210.0185
SER 1220.0257
GLU 1230.0202
GLN 1240.0194
LEU 1250.0238
THR 1260.0286
SER 1270.0254
GLY 1280.0212
GLY 1290.0175
ALA 1300.0172
SER 1310.0130
VAL 1320.0112
VAL 1330.0109
CYS 1340.0053
PHE 1350.0031
LEU 1360.0080
ASN 1370.0119
ASN 1380.0130
PHE 1390.0136
TYR 1400.0055
PRO 1410.0099
LYS 1420.0195
ASP 1430.0229
ILE 1440.0126
ASN 1450.0120
VAL 1460.0092
LYS 1470.0102
TRP 1480.0108
LYS 1490.0097
ILE 1500.0147
ASP 1510.0242
GLY 1520.0365
SER 1530.0267
GLU 1540.0160
ARG 1550.0165
GLN 1560.0410
ASN 1570.0801
GLY 1580.0123
VAL 1590.0201
LEU 1600.0310
ASN 1610.0133
SER 1620.0073
TRP 1630.0107
THR 1640.0117
ASP 1650.0105
GLN 1660.0124
ASP 1670.0099
SER 1680.0051
LYS 1690.0337
ASP 1700.0189
SER 1710.0192
THR 1720.0202
TYR 1730.0159
SER 1740.0124
MET 1750.0106
SER 1760.0084
SER 1770.0113
THR 1780.0153
LEU 1790.0113
THR 1800.0107
LEU 1810.0063
THR 1820.0133
LYS 1830.0183
ASP 1840.0150
GLU 1850.0058
TYR 1860.0112
GLU 1870.0113
ARG 1880.0093
HIS 1890.0079
ASN 1900.0073
SER 1910.0084
TYR 1920.0084
THR 1930.0076
CYS 1940.0070
GLU 1950.0064
ALA 1960.0099
THR 1970.0216
HIS 1980.0132
LYS 1990.0187
THR 2000.0193
SER 2010.0169
THR 2020.0416
SER 2030.0515
PRO 2040.0353
ILE 2050.0304
VAL 2060.0126
LYS 2070.0110
SER 2080.0078
PHE 2090.0052
ASN 2100.0031
ARG 2110.0064
ASN 2120.0232
GLU 2130.0153
CYS 2140.0103

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.