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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 78  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1220
ILE 4210.0134
PHE 4220.0156
ILE 4230.0135
SER 4240.0131
ASN 4250.0106
ASP 4260.0137
LYS 4270.0053
GLU 4280.0079
SER 4290.0113
ILE 4300.0089
LYS 4310.0102
CYS 4320.0114
PRO 4330.0121
CYS 4340.0110
GLU 4350.0084
PRO 4360.0074
GLU 4370.0097
ARG 4380.0088
ILE 4390.0126
SER 4400.0121
GLU 4410.0150
SER 4420.0160
THR 4430.0252
CYS 4440.0236
ASN 4450.0081
PHE 4460.0050
TYR 4470.0053
VAL 4480.0060
CYS 4490.0092
ASN 4500.0096
CYS 4510.0155
VAL 4520.0178
GLU 4530.0176
LYS 4540.0468
GLU 10.0218
VAL 20.0029
GLN 30.0190
LEU 40.0111
VAL 50.0122
GLU 60.0110
SER 70.0090
GLY 80.0074
GLY 90.0060
GLY 100.0068
LEU 110.0047
VAL 120.0022
LYS 130.0040
PRO 140.0074
GLY 150.0155
GLY 160.0092
SER 170.0087
LEU 180.0089
LYS 190.0050
LEU 200.0053
SER 210.0066
CYS 220.0072
ALA 230.0086
ALA 240.0104
SER 250.0106
GLY 260.0070
PHE 270.0094
ILE 280.0113
PHE 290.0084
SER 300.0080
ASP 310.0074
TYR 320.0055
TYR 330.0043
MET 340.0023
TYR 350.0030
TRP 360.0021
VAL 370.0041
ARG 380.0027
GLN 390.0033
THR 400.0019
PRO 410.0086
GLU 420.0175
LYS 430.0096
ARG 440.0080
LEU 450.0071
GLU 460.0055
TRP 470.0051
VAL 480.0046
ALA 490.0061
THR 500.0065
ILE 510.0062
SER 520.0069
ASP 520.0062
GLY 530.0141
ASN 540.0177
SER 550.0106
TYR 560.0121
THR 570.0127
TYR 580.0090
TYR 590.0066
VAL 600.0068
ASP 610.0220
SER 620.0160
VAL 630.0068
LYS 640.0135
GLY 650.0142
ARG 660.0100
PHE 670.0051
THR 680.0060
ILE 690.0056
SER 700.0063
ARG 710.0046
ASP 720.0080
ASN 730.0092
ALA 740.0176
LYS 750.0210
ASN 760.0049
ASN 770.0031
LEU 780.0017
TYR 790.0035
LEU 800.0036
GLN 810.0041
MET 820.0074
SER 820.0096
SER 820.0109
LEU 820.0077
LYS 830.0086
SER 840.0084
GLU 850.0074
ASP 860.0025
THR 870.0037
ALA 880.0030
ILE 890.0027
TYR 900.0022
TYR 910.0045
CYS 920.0056
ALA 930.0041
ARG 940.0088
ASP 950.0082
GLY 960.0088
PRO 970.0189
THR 980.0212
ASP 990.0184
SER 1000.0063
SER 1000.0064
GLY 1000.0066
TYR 1000.0061
GLY 1000.0057
GLY 1000.0055
PHE 1000.0058
GLY 1010.0063
TYR 1020.0071
TRP 1030.0069
GLY 1040.0095
GLN 1050.0098
GLY 1060.0073
THR 1070.0070
LEU 1080.0059
VAL 1090.0043
THR 1100.0041
VAL 1110.0022
SER 1120.0054
GLU 1130.0101
ALA 1140.0091
LYS 1150.0117
THR 1160.0049
THR 1170.0054
PRO 1180.0091
PRO 1190.0063
SER 1200.0081
VAL 1210.0078
TYR 1220.0077
PRO 1230.0080
LEU 1240.0079
ALA 1250.0105
PRO 1260.0110
GLY 1270.0159
SER 1280.0138
ALA 1290.0359
ALA 1300.0143
GLN 1330.0298
THR 1340.0185
ASN 1350.0149
SER 1360.0137
MET 1370.0075
VAL 1380.0071
THR 1390.0019
LEU 1400.0036
GLY 1410.0049
CYS 1420.0034
LEU 1430.0037
VAL 1440.0049
LYS 1450.0042
GLY 1460.0059
TYR 1470.0062
PHE 1480.0041
PRO 1490.0042
GLU 1500.0033
PRO 1510.0070
VAL 1520.0053
THR 1530.0069
VAL 1540.0142
THR 1560.0243
TRP 1570.0158
ASN 1620.0600
SER 1630.0825
GLY 1640.0602
SER 1650.0552
LEU 1660.0237
SER 1670.0608
SER 1680.1220
GLY 1690.0566
VAL 1710.0103
HIS 1720.0088
THR 1730.0121
PHE 1740.0075
PRO 1750.0115
ALA 1760.0117
VAL 1770.0117
LEU 1780.0099
GLN 1790.0168
SER 1800.0151
ASP 1830.0096
LEU 1840.0076
TYR 1850.0046
THR 1860.0025
LEU 1870.0032
SER 1880.0023
SER 1890.0037
SER 1900.0065
VAL 1910.0113
THR 1920.0137
VAL 1930.0075
PRO 1940.0135
SER 1950.0254
SER 1960.0255
PRO 1980.0144
ARG 1990.0145
PRO 2000.0214
SER 2020.0265
GLU 2030.0264
THR 2040.0172
VAL 2050.0188
THR 2060.0114
CYS 2080.0069
ASN 2090.0118
VAL 2100.0156
ALA 2110.0020
HIS 2120.0038
PRO 2130.0171
ALA 2140.0169
SER 2150.0179
SER 2160.0293
THR 2170.0101
LYS 2180.0051
VAL 2190.0114
ASP 2200.0126
LYS 2210.0102
LYS 2220.0093
ILE 2230.0151
VAL 2260.0264
PRO 2270.0207
ARG 2280.0121
ASP 2320.0912
CYS 2330.0219
SER 20.0056
VAL 30.0058
LEU 40.0081
SER 50.0128
GLN 60.0112
SER 70.0130
PRO 80.0121
ALA 90.0130
ILE 100.0074
LEU 110.0076
SER 120.0067
ALA 130.0039
SER 140.0143
PRO 150.0133
GLY 160.0150
GLU 170.0099
LYS 180.0076
VAL 190.0125
THR 200.0089
MET 210.0061
THR 220.0065
CYS 230.0082
ARG 240.0077
ALA 250.0065
ARG 260.0082
SER 270.0099
SER 290.0078
VAL 300.0045
SER 310.0039
TYR 320.0052
MET 330.0052
HIS 340.0057
TRP 350.0048
TYR 360.0052
GLN 370.0056
GLN 380.0062
LYS 390.0069
SER 400.0156
GLY 410.0455
SER 420.0262
SER 430.0059
PRO 440.0029
LYS 450.0037
PRO 460.0048
TRP 470.0035
ILE 480.0036
HIS 490.0036
ALA 500.0052
THR 510.0057
SER 520.0068
ASN 530.0079
LEU 540.0058
ALA 550.0025
SER 560.0330
GLY 570.0105
VAL 580.0155
PRO 590.0191
ALA 600.0203
ARG 610.0144
PHE 620.0094
SER 630.0082
GLY 640.0062
SER 650.0029
GLY 660.0023
SER 670.0019
GLY 680.0074
THR 690.0058
SER 700.0070
TYR 710.0022
SER 720.0015
LEU 730.0017
THR 740.0098
ILE 750.0078
SER 760.0103
ARG 770.0036
VAL 780.0011
GLU 790.0067
ALA 800.0023
GLU 810.0017
ASP 820.0014
ALA 830.0033
ALA 840.0038
THR 850.0050
TYR 860.0055
TYR 870.0076
CYS 880.0081
GLN 890.0071
GLN 900.0052
TRP 910.0052
SER 920.0063
SER 930.0060
HIS 940.0067
PRO 950.0044
PRO 960.0051
THR 970.0051
PHE 980.0083
GLY 990.0090
SER 1000.0104
GLY 1010.0101
THR 1020.0060
LYS 1030.0028
LEU 1040.0038
GLU 1050.0054
ILE 1060.0047
LYS 1070.0051
ARG 1080.0099
ALA 1090.0145
ASP 1100.0235
ALA 1110.0232
ALA 1120.0206
PRO 1130.0156
THR 1140.0181
VAL 1150.0118
SER 1160.0052
ILE 1170.0035
PHE 1180.0047
PRO 1190.0103
PRO 1200.0104
SER 1210.0109
SER 1220.0155
GLU 1230.0136
GLN 1240.0111
LEU 1250.0101
THR 1260.0132
SER 1270.0125
GLY 1280.0098
GLY 1290.0077
ALA 1300.0067
SER 1310.0044
VAL 1320.0042
VAL 1330.0030
CYS 1340.0054
PHE 1350.0085
LEU 1360.0139
ASN 1370.0199
ASN 1380.0200
PHE 1390.0182
TYR 1400.0082
PRO 1410.0102
LYS 1420.0220
ASP 1430.0244
ILE 1440.0102
ASN 1450.0101
VAL 1460.0037
LYS 1470.0046
TRP 1480.0047
LYS 1490.0047
ILE 1500.0041
ASP 1510.0026
GLY 1520.0108
SER 1530.0055
GLU 1540.0107
ARG 1550.0113
GLN 1560.0074
ASN 1570.0060
GLY 1580.0035
VAL 1590.0052
LEU 1600.0066
ASN 1610.0115
SER 1620.0118
TRP 1630.0155
THR 1640.0131
ASP 1650.0167
GLN 1660.0168
ASP 1670.0149
SER 1680.0110
LYS 1690.0446
ASP 1700.0249
SER 1710.0232
THR 1720.0292
TYR 1730.0218
SER 1740.0202
MET 1750.0186
SER 1760.0105
SER 1770.0078
THR 1780.0040
LEU 1790.0016
THR 1800.0015
LEU 1810.0029
THR 1820.0075
LYS 1830.0109
ASP 1840.0122
GLU 1850.0069
TYR 1860.0057
GLU 1870.0063
ARG 1880.0051
HIS 1890.0035
ASN 1900.0056
SER 1910.0059
TYR 1920.0068
THR 1930.0073
CYS 1940.0029
GLU 1950.0047
ALA 1960.0042
THR 1970.0066
HIS 1980.0120
LYS 1990.0256
THR 2000.0204
SER 2010.0114
THR 2020.0479
SER 2030.0166
PRO 2040.0114
ILE 2050.0086
VAL 2060.0042
LYS 2070.0030
SER 2080.0073
PHE 2090.0147
ASN 2100.0114
ARG 2110.0048
ASN 2120.0225
GLU 2130.0198
CYS 2140.0134

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.