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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 79  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0542
ILE 4210.0244
PHE 4220.0218
ILE 4230.0123
SER 4240.0102
ASN 4250.0078
ASP 4260.0165
LYS 4270.0092
GLU 4280.0194
SER 4290.0240
ILE 4300.0171
LYS 4310.0215
CYS 4320.0192
PRO 4330.0187
CYS 4340.0172
GLU 4350.0130
PRO 4360.0097
GLU 4370.0110
ARG 4380.0093
ILE 4390.0150
SER 4400.0143
GLU 4410.0192
SER 4420.0184
THR 4430.0289
CYS 4440.0259
ASN 4450.0108
PHE 4460.0071
TYR 4470.0074
VAL 4480.0075
CYS 4490.0105
ASN 4500.0104
CYS 4510.0167
VAL 4520.0169
GLU 4530.0160
LYS 4540.0425
GLU 10.0415
VAL 20.0112
GLN 30.0256
LEU 40.0129
VAL 50.0153
GLU 60.0142
SER 70.0128
GLY 80.0112
GLY 90.0084
GLY 100.0051
LEU 110.0059
VAL 120.0079
LYS 130.0110
PRO 140.0165
GLY 150.0209
GLY 160.0144
SER 170.0130
LEU 180.0106
LYS 190.0078
LEU 200.0073
SER 210.0086
CYS 220.0091
ALA 230.0094
ALA 240.0099
SER 250.0142
GLY 260.0120
PHE 270.0184
ILE 280.0223
PHE 290.0159
SER 300.0143
ASP 310.0149
TYR 320.0135
TYR 330.0127
MET 340.0097
TYR 350.0105
TRP 360.0087
VAL 370.0034
ARG 380.0004
GLN 390.0038
THR 400.0068
PRO 410.0144
GLU 420.0253
LYS 430.0131
ARG 440.0109
LEU 450.0084
GLU 460.0070
TRP 470.0070
VAL 480.0051
ALA 490.0128
THR 500.0134
ILE 510.0111
SER 520.0142
ASP 520.0113
GLY 530.0290
ASN 540.0400
SER 550.0242
TYR 560.0268
THR 570.0266
TYR 580.0158
TYR 590.0102
VAL 600.0089
ASP 610.0287
SER 620.0247
VAL 630.0084
LYS 640.0158
GLY 650.0142
ARG 660.0057
PHE 670.0004
THR 680.0035
ILE 690.0057
SER 700.0070
ARG 710.0072
ASP 720.0125
ASN 730.0211
ALA 740.0302
LYS 750.0288
ASN 760.0057
ASN 770.0050
LEU 780.0045
TYR 790.0014
LEU 800.0016
GLN 810.0029
MET 820.0097
SER 820.0114
SER 820.0121
LEU 820.0100
LYS 830.0096
SER 840.0088
GLU 850.0069
ASP 860.0054
THR 870.0054
ALA 880.0049
ILE 890.0061
TYR 900.0061
TYR 910.0079
CYS 920.0088
ALA 930.0096
ARG 940.0205
ASP 950.0170
GLY 960.0199
PRO 970.0401
THR 980.0473
ASP 990.0386
SER 1000.0108
SER 1000.0099
GLY 1000.0094
TYR 1000.0074
GLY 1000.0060
GLY 1000.0066
PHE 1000.0100
GLY 1010.0116
TYR 1020.0159
TRP 1030.0069
GLY 1040.0110
GLN 1050.0131
GLY 1060.0112
THR 1070.0099
LEU 1080.0075
VAL 1090.0040
THR 1100.0038
VAL 1110.0077
SER 1120.0121
GLU 1130.0245
ALA 1140.0162
LYS 1150.0147
THR 1160.0083
THR 1170.0108
PRO 1180.0045
PRO 1190.0042
SER 1200.0044
VAL 1210.0038
TYR 1220.0053
PRO 1230.0054
LEU 1240.0056
ALA 1250.0064
PRO 1260.0058
GLY 1270.0185
SER 1280.0159
ALA 1290.0159
ALA 1300.0167
GLN 1330.0254
THR 1340.0111
ASN 1350.0439
SER 1360.0321
MET 1370.0296
VAL 1380.0257
THR 1390.0102
LEU 1400.0094
GLY 1410.0076
CYS 1420.0032
LEU 1430.0032
VAL 1440.0034
LYS 1450.0074
GLY 1460.0068
TYR 1470.0058
PHE 1480.0057
PRO 1490.0037
GLU 1500.0045
PRO 1510.0054
VAL 1520.0054
THR 1530.0086
VAL 1540.0070
THR 1560.0119
TRP 1570.0094
ASN 1620.0246
SER 1630.0308
GLY 1640.0178
SER 1650.0226
LEU 1660.0163
SER 1670.0276
SER 1680.0542
GLY 1690.0213
VAL 1710.0055
HIS 1720.0042
THR 1730.0051
PHE 1740.0091
PRO 1750.0084
ALA 1760.0066
VAL 1770.0046
LEU 1780.0029
GLN 1790.0045
SER 1800.0090
ASP 1830.0061
LEU 1840.0067
TYR 1850.0059
THR 1860.0041
LEU 1870.0048
SER 1880.0058
SER 1890.0053
SER 1900.0059
VAL 1910.0051
THR 1920.0152
VAL 1930.0132
PRO 1940.0167
SER 1950.0186
SER 1960.0166
PRO 1980.0125
ARG 1990.0139
PRO 2000.0177
SER 2020.0201
GLU 2030.0159
THR 2040.0150
VAL 2050.0053
THR 2060.0033
CYS 2080.0087
ASN 2090.0096
VAL 2100.0103
ALA 2110.0113
HIS 2120.0069
PRO 2130.0090
ALA 2140.0099
SER 2150.0104
SER 2160.0159
THR 2170.0108
LYS 2180.0138
VAL 2190.0133
ASP 2200.0059
LYS 2210.0026
LYS 2220.0053
ILE 2230.0064
VAL 2260.0094
PRO 2270.0054
ARG 2280.0120
ASP 2320.0148
CYS 2330.0143
SER 20.0242
VAL 30.0322
LEU 40.0288
SER 50.0111
GLN 60.0096
SER 70.0129
PRO 80.0232
ALA 90.0197
ILE 100.0220
LEU 110.0230
SER 120.0183
ALA 130.0172
SER 140.0101
PRO 150.0072
GLY 160.0168
GLU 170.0079
LYS 180.0039
VAL 190.0166
THR 200.0185
MET 210.0118
THR 220.0078
CYS 230.0171
ARG 240.0156
ALA 250.0166
ARG 260.0357
SER 270.0250
SER 290.0174
VAL 300.0121
SER 310.0096
TYR 320.0117
MET 330.0136
HIS 340.0127
TRP 350.0072
TYR 360.0049
GLN 370.0036
GLN 380.0053
LYS 390.0073
SER 400.0051
GLY 410.0313
SER 420.0201
SER 430.0073
PRO 440.0043
LYS 450.0046
PRO 460.0034
TRP 470.0039
ILE 480.0064
HIS 490.0074
ALA 500.0126
THR 510.0142
SER 520.0134
ASN 530.0120
LEU 540.0052
ALA 550.0047
SER 560.0196
GLY 570.0121
VAL 580.0038
PRO 590.0100
ALA 600.0101
ARG 610.0175
PHE 620.0083
SER 630.0037
GLY 640.0075
SER 650.0134
GLY 660.0146
SER 670.0153
GLY 680.0125
THR 690.0161
SER 700.0170
TYR 710.0107
SER 720.0064
LEU 730.0067
THR 740.0155
ILE 750.0141
SER 760.0104
ARG 770.0199
VAL 780.0135
GLU 790.0220
ALA 800.0132
GLU 810.0248
ASP 820.0256
ALA 830.0202
ALA 840.0128
THR 850.0080
TYR 860.0034
TYR 870.0082
CYS 880.0124
GLN 890.0160
GLN 900.0132
TRP 910.0087
SER 920.0073
SER 930.0039
HIS 940.0050
PRO 950.0035
PRO 960.0102
THR 970.0168
PHE 980.0152
GLY 990.0167
SER 1000.0133
GLY 1010.0072
THR 1020.0074
LYS 1030.0113
LEU 1040.0197
GLU 1050.0161
ILE 1060.0147
LYS 1070.0133
ARG 1080.0159
ALA 1090.0160
ASP 1100.0206
ALA 1110.0185
ALA 1120.0128
PRO 1130.0120
THR 1140.0110
VAL 1150.0084
SER 1160.0047
ILE 1170.0051
PHE 1180.0065
PRO 1190.0126
PRO 1200.0136
SER 1210.0139
SER 1220.0220
GLU 1230.0170
GLN 1240.0127
LEU 1250.0145
THR 1260.0189
SER 1270.0146
GLY 1280.0086
GLY 1290.0071
ALA 1300.0111
SER 1310.0108
VAL 1320.0086
VAL 1330.0054
CYS 1340.0036
PHE 1350.0071
LEU 1360.0127
ASN 1370.0186
ASN 1380.0178
PHE 1390.0161
TYR 1400.0060
PRO 1410.0080
LYS 1420.0217
ASP 1430.0292
ILE 1440.0174
ASN 1450.0194
VAL 1460.0052
LYS 1470.0051
TRP 1480.0062
LYS 1490.0070
ILE 1500.0053
ASP 1510.0048
GLY 1520.0137
SER 1530.0182
GLU 1540.0208
ARG 1550.0105
GLN 1560.0104
ASN 1570.0281
GLY 1580.0081
VAL 1590.0079
LEU 1600.0071
ASN 1610.0081
SER 1620.0136
TRP 1630.0208
THR 1640.0166
ASP 1650.0125
GLN 1660.0106
ASP 1670.0137
SER 1680.0223
LYS 1690.0342
ASP 1700.0183
SER 1710.0135
THR 1720.0222
TYR 1730.0187
SER 1740.0189
MET 1750.0189
SER 1760.0087
SER 1770.0035
THR 1780.0049
LEU 1790.0098
THR 1800.0104
LEU 1810.0093
THR 1820.0064
LYS 1830.0051
ASP 1840.0049
GLU 1850.0072
TYR 1860.0042
GLU 1870.0072
ARG 1880.0112
HIS 1890.0080
ASN 1900.0060
SER 1910.0018
TYR 1920.0042
THR 1930.0039
CYS 1940.0024
GLU 1950.0029
ALA 1960.0060
THR 1970.0088
HIS 1980.0080
LYS 1990.0238
THR 2000.0155
SER 2010.0068
THR 2020.0270
SER 2030.0125
PRO 2040.0082
ILE 2050.0078
VAL 2060.0015
LYS 2070.0042
SER 2080.0056
PHE 2090.0035
ASN 2100.0059
ARG 2110.0108
ASN 2120.0291
GLU 2130.0153
CYS 2140.0215

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.