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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0375
ILE 4210.0080
PHE 4220.0050
ILE 4230.0026
SER 4240.0064
ASN 4250.0121
ASP 4260.0139
LYS 4270.0120
GLU 4280.0138
SER 4290.0122
ILE 4300.0077
LYS 4310.0105
CYS 4320.0064
PRO 4330.0073
CYS 4340.0040
GLU 4350.0054
PRO 4360.0047
GLU 4370.0078
ARG 4380.0122
ILE 4390.0164
SER 4400.0221
GLU 4410.0271
SER 4420.0326
THR 4430.0317
CYS 4440.0252
ASN 4450.0187
PHE 4460.0126
TYR 4470.0079
VAL 4480.0043
CYS 4490.0022
ASN 4500.0058
CYS 4510.0051
VAL 4520.0087
GLU 4530.0117
LYS 4540.0165
GLU 10.0228
VAL 20.0181
GLN 30.0170
LEU 40.0129
VAL 50.0135
GLU 60.0115
SER 70.0118
GLY 80.0121
GLY 90.0078
GLY 100.0055
LEU 110.0009
VAL 120.0058
LYS 130.0068
PRO 140.0145
GLY 150.0193
GLY 160.0169
SER 170.0172
LEU 180.0153
LYS 190.0170
LEU 200.0139
SER 210.0154
CYS 220.0144
ALA 230.0179
ALA 240.0174
SER 250.0210
GLY 260.0225
PHE 270.0206
ILE 280.0212
PHE 290.0191
SER 300.0194
ASP 310.0168
TYR 320.0132
TYR 330.0107
MET 340.0101
TYR 350.0075
TRP 360.0074
VAL 370.0050
ARG 380.0053
GLN 390.0049
THR 400.0070
PRO 410.0079
GLU 420.0087
LYS 430.0066
ARG 440.0077
LEU 450.0056
GLU 460.0075
TRP 470.0070
VAL 480.0096
ALA 490.0111
THR 500.0105
ILE 510.0136
SER 520.0134
ASP 520.0162
GLY 530.0194
ASN 540.0214
SER 550.0204
TYR 560.0175
THR 570.0169
TYR 580.0148
TYR 590.0153
VAL 600.0149
ASP 610.0202
SER 620.0194
VAL 630.0181
LYS 640.0218
GLY 650.0249
ARG 660.0220
PHE 670.0187
THR 680.0197
ILE 690.0170
SER 700.0195
ARG 710.0200
ASP 720.0237
ASN 730.0240
ALA 740.0284
LYS 750.0266
ASN 760.0223
ASN 770.0198
LEU 780.0164
TYR 790.0166
LEU 800.0154
GLN 810.0188
MET 820.0173
SER 820.0199
SER 820.0209
LEU 820.0162
LYS 830.0165
SER 840.0140
GLU 850.0143
ASP 860.0119
THR 870.0084
ALA 880.0060
ILE 890.0032
TYR 900.0055
TYR 910.0052
CYS 920.0076
ALA 930.0065
ARG 940.0078
ASP 950.0070
GLY 960.0108
PRO 970.0145
THR 980.0149
ASP 990.0160
SER 1000.0134
SER 1000.0098
GLY 1000.0068
TYR 1000.0069
GLY 1000.0040
GLY 1000.0053
PHE 1000.0044
GLY 1010.0084
TYR 1020.0093
TRP 1030.0062
GLY 1040.0079
GLN 1050.0076
GLY 1060.0049
THR 1070.0053
LEU 1080.0035
VAL 1090.0049
THR 1100.0043
VAL 1110.0084
SER 1120.0092
GLU 1130.0108
ALA 1140.0158
LYS 1150.0207
THR 1160.0193
THR 1170.0218
PRO 1180.0226
PRO 1190.0191
SER 1200.0202
VAL 1210.0180
TYR 1220.0154
PRO 1230.0145
LEU 1240.0092
ALA 1250.0107
PRO 1260.0091
GLY 1270.0062
SER 1280.0089
ALA 1290.0147
ALA 1300.0162
GLN 1330.0202
THR 1340.0245
ASN 1350.0269
SER 1360.0299
MET 1370.0251
VAL 1380.0196
THR 1390.0145
LEU 1400.0126
GLY 1410.0096
CYS 1420.0111
LEU 1430.0097
VAL 1440.0127
LYS 1450.0145
GLY 1460.0176
TYR 1470.0173
PHE 1480.0152
PRO 1490.0118
GLU 1500.0088
PRO 1510.0105
VAL 1520.0134
THR 1530.0159
VAL 1540.0162
THR 1560.0206
TRP 1570.0219
ASN 1620.0273
SER 1630.0291
GLY 1640.0278
SER 1650.0305
LEU 1660.0259
SER 1670.0244
SER 1680.0247
GLY 1690.0198
VAL 1710.0143
HIS 1720.0099
THR 1730.0081
PHE 1740.0026
PRO 1750.0022
ALA 1760.0056
VAL 1770.0078
LEU 1780.0115
GLN 1790.0145
SER 1800.0194
ASP 1830.0168
LEU 1840.0158
TYR 1850.0123
THR 1860.0103
LEU 1870.0068
SER 1880.0058
SER 1890.0079
SER 1900.0095
VAL 1910.0150
THR 1920.0191
VAL 1930.0247
PRO 1940.0292
SER 1950.0278
SER 1960.0329
PRO 1980.0309
ARG 1990.0255
PRO 2000.0247
SER 2020.0311
GLU 2030.0332
THR 2040.0301
VAL 2050.0241
THR 2060.0237
CYS 2080.0197
ASN 2090.0227
VAL 2100.0209
ALA 2110.0209
HIS 2120.0195
PRO 2130.0227
ALA 2140.0197
SER 2150.0242
SER 2160.0277
THR 2170.0270
LYS 2180.0274
VAL 2190.0260
ASP 2200.0259
LYS 2210.0224
LYS 2220.0234
ILE 2230.0191
VAL 2260.0201
PRO 2270.0166
ARG 2280.0131
ASP 2320.0159
CYS 2330.0126
SER 20.0152
VAL 30.0154
LEU 40.0145
SER 50.0158
GLN 60.0145
SER 70.0170
PRO 80.0150
ALA 90.0121
ILE 100.0095
LEU 110.0106
SER 120.0085
ALA 130.0093
SER 140.0082
PRO 150.0113
GLY 160.0164
GLU 170.0165
LYS 180.0189
VAL 190.0171
THR 200.0189
MET 210.0164
THR 220.0176
CYS 230.0164
ARG 240.0189
ALA 250.0178
ARG 260.0206
SER 270.0204
SER 290.0195
VAL 300.0157
SER 310.0155
TYR 320.0132
MET 330.0124
HIS 340.0099
TRP 350.0099
TYR 360.0074
GLN 370.0074
GLN 380.0053
LYS 390.0049
SER 400.0032
GLY 410.0038
SER 420.0050
SER 430.0045
PRO 440.0048
LYS 450.0076
PRO 460.0090
TRP 470.0111
ILE 480.0130
HIS 490.0123
ALA 500.0135
THR 510.0159
SER 520.0186
ASN 530.0179
LEU 540.0173
ALA 550.0155
SER 560.0170
GLY 570.0182
VAL 580.0166
PRO 590.0197
ALA 600.0226
ARG 610.0207
PHE 620.0185
SER 630.0199
GLY 640.0189
SER 650.0213
GLY 660.0217
SER 670.0218
GLY 680.0218
THR 690.0213
SER 700.0216
TYR 710.0188
SER 720.0182
LEU 730.0168
THR 740.0188
ILE 750.0178
SER 760.0213
ARG 770.0180
VAL 780.0136
GLU 790.0124
ALA 800.0072
GLU 810.0098
ASP 820.0089
ALA 830.0058
ALA 840.0052
THR 850.0056
TYR 860.0082
TYR 870.0079
CYS 880.0097
GLN 890.0086
GLN 900.0091
TRP 910.0068
SER 920.0094
SER 930.0108
HIS 940.0102
PRO 950.0098
PRO 960.0073
THR 970.0096
PHE 980.0076
GLY 990.0098
SER 1000.0093
GLY 1010.0084
THR 1020.0094
LYS 1030.0068
LEU 1040.0068
GLU 1050.0040
ILE 1060.0043
LYS 1070.0040
ARG 1080.0107
ALA 1090.0171
ASP 1100.0219
ALA 1110.0220
ALA 1120.0234
PRO 1130.0188
THR 1140.0183
VAL 1150.0153
SER 1160.0108
ILE 1170.0070
PHE 1180.0024
PRO 1190.0041
PRO 1200.0092
SER 1210.0122
SER 1220.0170
GLU 1230.0206
GLN 1240.0191
LEU 1250.0198
THR 1260.0252
SER 1270.0276
GLY 1280.0269
GLY 1290.0221
ALA 1300.0163
SER 1310.0117
VAL 1320.0078
VAL 1330.0042
CYS 1340.0070
PHE 1350.0075
LEU 1360.0120
ASN 1370.0128
ASN 1380.0151
PHE 1390.0164
TYR 1400.0153
PRO 1410.0143
LYS 1420.0116
ASP 1430.0170
ILE 1440.0177
ASN 1450.0188
VAL 1460.0183
LYS 1470.0209
TRP 1480.0187
LYS 1490.0222
ILE 1500.0211
ASP 1510.0223
GLY 1520.0281
SER 1530.0279
GLU 1540.0295
ARG 1550.0273
GLN 1560.0255
ASN 1570.0255
GLY 1580.0203
VAL 1590.0148
LEU 1600.0111
ASN 1610.0087
SER 1620.0052
TRP 1630.0056
THR 1640.0048
ASP 1650.0029
GLN 1660.0046
ASP 1670.0089
SER 1680.0096
LYS 1690.0123
ASP 1700.0132
SER 1710.0090
THR 1720.0109
TYR 1730.0089
SER 1740.0085
MET 1750.0074
SER 1760.0050
SER 1770.0078
THR 1780.0081
LEU 1790.0132
THR 1800.0164
LEU 1810.0205
THR 1820.0253
LYS 1830.0227
ASP 1840.0268
GLU 1850.0255
TYR 1860.0193
GLU 1870.0196
ARG 1880.0234
HIS 1890.0202
ASN 1900.0158
SER 1910.0157
TYR 1920.0143
THR 1930.0165
CYS 1940.0158
GLU 1950.0210
ALA 1960.0211
THR 1970.0243
HIS 1980.0234
LYS 1990.0268
THR 2000.0289
SER 2010.0326
THR 2020.0375
SER 2030.0349
PRO 2040.0289
ILE 2050.0250
VAL 2060.0221
LYS 2070.0168
SER 2080.0146
PHE 2090.0100
ASN 2100.0098
ARG 2110.0085
ASN 2120.0080
GLU 2130.0033
CYS 2140.0054

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.