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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 80  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0510
ILE 4210.0310
PHE 4220.0194
ILE 4230.0222
SER 4240.0208
ASN 4250.0222
ASP 4260.0182
LYS 4270.0082
GLU 4280.0127
SER 4290.0086
ILE 4300.0147
LYS 4310.0188
CYS 4320.0169
PRO 4330.0157
CYS 4340.0123
GLU 4350.0087
PRO 4360.0128
GLU 4370.0113
ARG 4380.0096
ILE 4390.0181
SER 4400.0172
GLU 4410.0177
SER 4420.0254
THR 4430.0268
CYS 4440.0283
ASN 4450.0120
PHE 4460.0103
TYR 4470.0095
VAL 4480.0084
CYS 4490.0129
ASN 4500.0151
CYS 4510.0214
VAL 4520.0257
GLU 4530.0299
LYS 4540.0392
GLU 10.0406
VAL 20.0041
GLN 30.0362
LEU 40.0231
VAL 50.0214
GLU 60.0195
SER 70.0215
GLY 80.0189
GLY 90.0162
GLY 100.0109
LEU 110.0107
VAL 120.0120
LYS 130.0059
PRO 140.0131
GLY 150.0104
GLY 160.0104
SER 170.0106
LEU 180.0137
LYS 190.0116
LEU 200.0145
SER 210.0177
CYS 220.0205
ALA 230.0221
ALA 240.0249
SER 250.0206
GLY 260.0132
PHE 270.0184
ILE 280.0224
PHE 290.0200
SER 300.0198
ASP 310.0146
TYR 320.0126
TYR 330.0101
MET 340.0049
TYR 350.0064
TRP 360.0083
VAL 370.0131
ARG 380.0115
GLN 390.0122
THR 400.0165
PRO 410.0248
GLU 420.0351
LYS 430.0230
ARG 440.0224
LEU 450.0211
GLU 460.0119
TRP 470.0106
VAL 480.0105
ALA 490.0040
THR 500.0041
ILE 510.0043
SER 520.0100
ASP 520.0089
GLY 530.0136
ASN 540.0190
SER 550.0186
TYR 560.0157
THR 570.0115
TYR 580.0108
TYR 590.0095
VAL 600.0077
ASP 610.0138
SER 620.0124
VAL 630.0116
LYS 640.0121
GLY 650.0117
ARG 660.0090
PHE 670.0057
THR 680.0058
ILE 690.0055
SER 700.0021
ARG 710.0015
ASP 720.0025
ASN 730.0086
ALA 740.0103
LYS 750.0139
ASN 760.0146
ASN 770.0128
LEU 780.0113
TYR 790.0104
LEU 800.0084
GLN 810.0062
MET 820.0071
SER 820.0044
SER 820.0035
LEU 820.0033
LYS 830.0021
SER 840.0022
GLU 850.0077
ASP 860.0045
THR 870.0005
ALA 880.0055
ILE 890.0098
TYR 900.0127
TYR 910.0141
CYS 920.0141
ALA 930.0129
ARG 940.0074
ASP 950.0060
GLY 960.0072
PRO 970.0107
THR 980.0093
ASP 990.0034
SER 1000.0037
SER 1000.0023
GLY 1000.0020
TYR 1000.0020
GLY 1000.0029
GLY 1000.0034
PHE 1000.0041
GLY 1010.0039
TYR 1020.0045
TRP 1030.0139
GLY 1040.0137
GLN 1050.0120
GLY 1060.0177
THR 1070.0155
LEU 1080.0110
VAL 1090.0105
THR 1100.0092
VAL 1110.0097
SER 1120.0220
GLU 1130.0275
ALA 1140.0145
LYS 1150.0215
THR 1160.0150
THR 1170.0190
PRO 1180.0130
PRO 1190.0112
SER 1200.0087
VAL 1210.0016
TYR 1220.0021
PRO 1230.0043
LEU 1240.0051
ALA 1250.0095
PRO 1260.0144
GLY 1270.0100
SER 1280.0213
ALA 1290.0484
ALA 1300.0179
GLN 1330.0302
THR 1340.0122
ASN 1350.0286
SER 1360.0293
MET 1370.0182
VAL 1380.0131
THR 1390.0100
LEU 1400.0096
GLY 1410.0100
CYS 1420.0095
LEU 1430.0096
VAL 1440.0100
LYS 1450.0111
GLY 1460.0106
TYR 1470.0111
PHE 1480.0125
PRO 1490.0125
GLU 1500.0135
PRO 1510.0156
VAL 1520.0086
THR 1530.0162
VAL 1540.0176
THR 1560.0169
TRP 1570.0108
ASN 1620.0136
SER 1630.0206
GLY 1640.0141
SER 1650.0216
LEU 1660.0146
SER 1670.0133
SER 1680.0168
GLY 1690.0088
VAL 1710.0073
HIS 1720.0073
THR 1730.0136
PHE 1740.0083
PRO 1750.0087
ALA 1760.0091
VAL 1770.0105
LEU 1780.0153
GLN 1790.0194
SER 1800.0150
ASP 1830.0157
LEU 1840.0111
TYR 1850.0104
THR 1860.0075
LEU 1870.0093
SER 1880.0135
SER 1890.0130
SER 1900.0097
VAL 1910.0088
THR 1920.0131
VAL 1930.0072
PRO 1940.0012
SER 1950.0087
SER 1960.0129
PRO 1980.0141
ARG 1990.0127
PRO 2000.0146
SER 2020.0163
GLU 2030.0154
THR 2040.0161
VAL 2050.0081
THR 2060.0054
CYS 2080.0117
ASN 2090.0173
VAL 2100.0203
ALA 2110.0182
HIS 2120.0086
PRO 2130.0102
ALA 2140.0274
SER 2150.0228
SER 2160.0209
THR 2170.0129
LYS 2180.0369
VAL 2190.0280
ASP 2200.0116
LYS 2210.0049
LYS 2220.0069
ILE 2230.0100
VAL 2260.0152
PRO 2270.0186
ARG 2280.0142
ASP 2320.0237
CYS 2330.0075
SER 20.0042
VAL 30.0061
LEU 40.0080
SER 50.0052
GLN 60.0078
SER 70.0095
PRO 80.0207
ALA 90.0201
ILE 100.0208
LEU 110.0148
SER 120.0140
ALA 130.0165
SER 140.0163
PRO 150.0143
GLY 160.0182
GLU 170.0152
LYS 180.0148
VAL 190.0146
THR 200.0103
MET 210.0096
THR 220.0098
CYS 230.0110
ARG 240.0088
ALA 250.0088
ARG 260.0125
SER 270.0240
SER 290.0165
VAL 300.0169
SER 310.0215
TYR 320.0113
MET 330.0106
HIS 340.0109
TRP 350.0049
TYR 360.0041
GLN 370.0040
GLN 380.0057
LYS 390.0037
SER 400.0074
GLY 410.0183
SER 420.0103
SER 430.0060
PRO 440.0061
LYS 450.0050
PRO 460.0058
TRP 470.0067
ILE 480.0037
HIS 490.0019
ALA 500.0074
THR 510.0067
SER 520.0026
ASN 530.0068
LEU 540.0081
ALA 550.0062
SER 560.0424
GLY 570.0094
VAL 580.0245
PRO 590.0347
ALA 600.0331
ARG 610.0246
PHE 620.0152
SER 630.0130
GLY 640.0088
SER 650.0112
GLY 660.0103
SER 670.0147
GLY 680.0213
THR 690.0160
SER 700.0152
TYR 710.0105
SER 720.0096
LEU 730.0111
THR 740.0189
ILE 750.0164
SER 760.0163
ARG 770.0211
VAL 780.0114
GLU 790.0188
ALA 800.0187
GLU 810.0221
ASP 820.0203
ALA 830.0093
ALA 840.0066
THR 850.0101
TYR 860.0050
TYR 870.0080
CYS 880.0097
GLN 890.0131
GLN 900.0135
TRP 910.0141
SER 920.0190
SER 930.0212
HIS 940.0217
PRO 950.0186
PRO 960.0159
THR 970.0145
PHE 980.0140
GLY 990.0163
SER 1000.0174
GLY 1010.0133
THR 1020.0135
LYS 1030.0136
LEU 1040.0150
GLU 1050.0145
ILE 1060.0152
LYS 1070.0249
ARG 1080.0257
ALA 1090.0280
ASP 1100.0115
ALA 1110.0156
ALA 1120.0183
PRO 1130.0113
THR 1140.0107
VAL 1150.0098
SER 1160.0052
ILE 1170.0060
PHE 1180.0075
PRO 1190.0088
PRO 1200.0091
SER 1210.0087
SER 1220.0110
GLU 1230.0098
GLN 1240.0117
LEU 1250.0130
THR 1260.0153
SER 1270.0160
GLY 1280.0175
GLY 1290.0155
ALA 1300.0119
SER 1310.0085
VAL 1320.0082
VAL 1330.0099
CYS 1340.0092
PHE 1350.0068
LEU 1360.0072
ASN 1370.0111
ASN 1380.0120
PHE 1390.0124
TYR 1400.0106
PRO 1410.0067
LYS 1420.0062
ASP 1430.0153
ILE 1440.0082
ASN 1450.0060
VAL 1460.0054
LYS 1470.0070
TRP 1480.0080
LYS 1490.0107
ILE 1500.0125
ASP 1510.0138
GLY 1520.0194
SER 1530.0123
GLU 1540.0206
ARG 1550.0079
GLN 1560.0176
ASN 1570.0347
GLY 1580.0074
VAL 1590.0096
LEU 1600.0129
ASN 1610.0057
SER 1620.0050
TRP 1630.0060
THR 1640.0043
ASP 1650.0063
GLN 1660.0092
ASP 1670.0127
SER 1680.0202
LYS 1690.0322
ASP 1700.0255
SER 1710.0210
THR 1720.0145
TYR 1730.0059
SER 1740.0060
MET 1750.0069
SER 1760.0086
SER 1770.0086
THR 1780.0090
LEU 1790.0097
THR 1800.0082
LEU 1810.0050
THR 1820.0133
LYS 1830.0136
ASP 1840.0129
GLU 1850.0055
TYR 1860.0048
GLU 1870.0057
ARG 1880.0067
HIS 1890.0035
ASN 1900.0063
SER 1910.0093
TYR 1920.0092
THR 1930.0090
CYS 1940.0060
GLU 1950.0056
ALA 1960.0081
THR 1970.0142
HIS 1980.0125
LYS 1990.0193
THR 2000.0163
SER 2010.0233
THR 2020.0510
SER 2030.0308
PRO 2040.0230
ILE 2050.0168
VAL 2060.0044
LYS 2070.0062
SER 2080.0064
PHE 2090.0084
ASN 2100.0056
ARG 2110.0033
ASN 2120.0149
GLU 2130.0119
CYS 2140.0145

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.