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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 81  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0871
ILE 4210.0256
PHE 4220.0231
ILE 4230.0215
SER 4240.0164
ASN 4250.0170
ASP 4260.0176
LYS 4270.0008
GLU 4280.0069
SER 4290.0154
ILE 4300.0145
LYS 4310.0182
CYS 4320.0171
PRO 4330.0131
CYS 4340.0112
GLU 4350.0078
PRO 4360.0142
GLU 4370.0186
ARG 4380.0179
ILE 4390.0216
SER 4400.0192
GLU 4410.0157
SER 4420.0239
THR 4430.0375
CYS 4440.0365
ASN 4450.0209
PHE 4460.0124
TYR 4470.0126
VAL 4480.0078
CYS 4490.0093
ASN 4500.0108
CYS 4510.0079
VAL 4520.0128
GLU 4530.0180
LYS 4540.0400
GLU 10.0156
VAL 20.0098
GLN 30.0160
LEU 40.0059
VAL 50.0049
GLU 60.0093
SER 70.0131
GLY 80.0127
GLY 90.0106
GLY 100.0032
LEU 110.0032
VAL 120.0035
LYS 130.0060
PRO 140.0040
GLY 150.0018
GLY 160.0013
SER 170.0028
LEU 180.0062
LYS 190.0114
LEU 200.0102
SER 210.0108
CYS 220.0074
ALA 230.0036
ALA 240.0077
SER 250.0134
GLY 260.0136
PHE 270.0154
ILE 280.0137
PHE 290.0112
SER 300.0111
ASP 310.0086
TYR 320.0096
TYR 330.0095
MET 340.0031
TYR 350.0022
TRP 360.0033
VAL 370.0058
ARG 380.0053
GLN 390.0078
THR 400.0128
PRO 410.0226
GLU 420.0234
LYS 430.0180
ARG 440.0122
LEU 450.0084
GLU 460.0059
TRP 470.0062
VAL 480.0065
ALA 490.0028
THR 500.0040
ILE 510.0047
SER 520.0100
ASP 520.0033
GLY 530.0048
ASN 540.0123
SER 550.0117
TYR 560.0134
THR 570.0110
TYR 580.0077
TYR 590.0089
VAL 600.0138
ASP 610.0250
SER 620.0177
VAL 630.0111
LYS 640.0148
GLY 650.0171
ARG 660.0121
PHE 670.0028
THR 680.0039
ILE 690.0041
SER 700.0111
ARG 710.0079
ASP 720.0074
ASN 730.0134
ALA 740.0164
LYS 750.0091
ASN 760.0073
ASN 770.0038
LEU 780.0063
TYR 790.0087
LEU 800.0071
GLN 810.0071
MET 820.0049
SER 820.0059
SER 820.0093
LEU 820.0071
LYS 830.0096
SER 840.0113
GLU 850.0098
ASP 860.0081
THR 870.0095
ALA 880.0068
ILE 890.0064
TYR 900.0058
TYR 910.0059
CYS 920.0051
ALA 930.0057
ARG 940.0069
ASP 950.0077
GLY 960.0084
PRO 970.0100
THR 980.0114
ASP 990.0121
SER 1000.0068
SER 1000.0060
GLY 1000.0059
TYR 1000.0058
GLY 1000.0043
GLY 1000.0037
PHE 1000.0026
GLY 1010.0039
TYR 1020.0038
TRP 1030.0052
GLY 1040.0065
GLN 1050.0076
GLY 1060.0101
THR 1070.0091
LEU 1080.0066
VAL 1090.0047
THR 1100.0041
VAL 1110.0032
SER 1120.0039
GLU 1130.0066
ALA 1140.0078
LYS 1150.0188
THR 1160.0151
THR 1170.0087
PRO 1180.0049
PRO 1190.0052
SER 1200.0067
VAL 1210.0043
TYR 1220.0055
PRO 1230.0057
LEU 1240.0094
ALA 1250.0141
PRO 1260.0168
GLY 1270.0348
SER 1280.0287
ALA 1290.0401
ALA 1300.0302
GLN 1330.0394
THR 1340.0139
ASN 1350.0579
SER 1360.0268
MET 1370.0301
VAL 1380.0364
THR 1390.0102
LEU 1400.0093
GLY 1410.0093
CYS 1420.0061
LEU 1430.0058
VAL 1440.0057
LYS 1450.0040
GLY 1460.0026
TYR 1470.0053
PHE 1480.0077
PRO 1490.0079
GLU 1500.0080
PRO 1510.0037
VAL 1520.0036
THR 1530.0073
VAL 1540.0140
THR 1560.0201
TRP 1570.0120
ASN 1620.0267
SER 1630.0347
GLY 1640.0148
SER 1650.0269
LEU 1660.0157
SER 1670.0303
SER 1680.0375
GLY 1690.0225
VAL 1710.0138
HIS 1720.0109
THR 1730.0092
PHE 1740.0085
PRO 1750.0087
ALA 1760.0093
VAL 1770.0133
LEU 1780.0116
GLN 1790.0068
SER 1800.0100
ASP 1830.0092
LEU 1840.0075
TYR 1850.0088
THR 1860.0077
LEU 1870.0079
SER 1880.0082
SER 1890.0091
SER 1900.0108
VAL 1910.0116
THR 1920.0229
VAL 1930.0176
PRO 1940.0163
SER 1950.0126
SER 1960.0098
PRO 1980.0282
ARG 1990.0281
PRO 2000.0272
SER 2020.0326
GLU 2030.0342
THR 2040.0285
VAL 2050.0187
THR 2060.0189
CYS 2080.0164
ASN 2090.0163
VAL 2100.0159
ALA 2110.0134
HIS 2120.0102
PRO 2130.0167
ALA 2140.0185
SER 2150.0141
SER 2160.0211
THR 2170.0122
LYS 2180.0123
VAL 2190.0137
ASP 2200.0119
LYS 2210.0085
LYS 2220.0080
ILE 2230.0109
VAL 2260.0234
PRO 2270.0303
ARG 2280.0337
ASP 2320.0871
CYS 2330.0329
SER 20.0191
VAL 30.0229
LEU 40.0206
SER 50.0103
GLN 60.0087
SER 70.0070
PRO 80.0034
ALA 90.0048
ILE 100.0095
LEU 110.0090
SER 120.0069
ALA 130.0045
SER 140.0052
PRO 150.0080
GLY 160.0087
GLU 170.0063
LYS 180.0046
VAL 190.0066
THR 200.0059
MET 210.0047
THR 220.0062
CYS 230.0152
ARG 240.0152
ALA 250.0156
ARG 260.0270
SER 270.0179
SER 290.0112
VAL 300.0101
SER 310.0093
TYR 320.0053
MET 330.0059
HIS 340.0054
TRP 350.0037
TYR 360.0026
GLN 370.0029
GLN 380.0062
LYS 390.0065
SER 400.0071
GLY 410.0106
SER 420.0094
SER 430.0086
PRO 440.0051
LYS 450.0048
PRO 460.0035
TRP 470.0024
ILE 480.0029
HIS 490.0033
ALA 500.0050
THR 510.0071
SER 520.0075
ASN 530.0046
LEU 540.0035
ALA 550.0033
SER 560.0072
GLY 570.0054
VAL 580.0053
PRO 590.0087
ALA 600.0075
ARG 610.0086
PHE 620.0040
SER 630.0058
GLY 640.0085
SER 650.0131
GLY 660.0139
SER 670.0147
GLY 680.0112
THR 690.0146
SER 700.0157
TYR 710.0108
SER 720.0079
LEU 730.0062
THR 740.0073
ILE 750.0073
SER 760.0077
ARG 770.0108
VAL 780.0084
GLU 790.0118
ALA 800.0130
GLU 810.0150
ASP 820.0153
ALA 830.0105
ALA 840.0083
THR 850.0092
TYR 860.0036
TYR 870.0046
CYS 880.0071
GLN 890.0076
GLN 900.0074
TRP 910.0067
SER 920.0074
SER 930.0097
HIS 940.0106
PRO 950.0128
PRO 960.0115
THR 970.0118
PHE 980.0089
GLY 990.0092
SER 1000.0095
GLY 1010.0042
THR 1020.0057
LYS 1030.0100
LEU 1040.0116
GLU 1050.0088
ILE 1060.0077
LYS 1070.0036
ARG 1080.0101
ALA 1090.0155
ASP 1100.0178
ALA 1110.0176
ALA 1120.0171
PRO 1130.0107
THR 1140.0105
VAL 1150.0122
SER 1160.0073
ILE 1170.0063
PHE 1180.0063
PRO 1190.0134
PRO 1200.0134
SER 1210.0146
SER 1220.0256
GLU 1230.0188
GLN 1240.0135
LEU 1250.0137
THR 1260.0170
SER 1270.0122
GLY 1280.0128
GLY 1290.0131
ALA 1300.0125
SER 1310.0054
VAL 1320.0030
VAL 1330.0020
CYS 1340.0040
PHE 1350.0049
LEU 1360.0065
ASN 1370.0085
ASN 1380.0078
PHE 1390.0080
TYR 1400.0139
PRO 1410.0145
LYS 1420.0146
ASP 1430.0147
ILE 1440.0130
ASN 1450.0127
VAL 1460.0182
LYS 1470.0164
TRP 1480.0123
LYS 1490.0129
ILE 1500.0105
ASP 1510.0112
GLY 1520.0240
SER 1530.0285
GLU 1540.0341
ARG 1550.0309
GLN 1560.0211
ASN 1570.0213
GLY 1580.0097
VAL 1590.0123
LEU 1600.0138
ASN 1610.0103
SER 1620.0107
TRP 1630.0091
THR 1640.0071
ASP 1650.0093
GLN 1660.0083
ASP 1670.0131
SER 1680.0119
LYS 1690.0305
ASP 1700.0127
SER 1710.0132
THR 1720.0126
TYR 1730.0074
SER 1740.0062
MET 1750.0086
SER 1760.0083
SER 1770.0074
THR 1780.0063
LEU 1790.0071
THR 1800.0115
LEU 1810.0133
THR 1820.0226
LYS 1830.0157
ASP 1840.0206
GLU 1850.0221
TYR 1860.0183
GLU 1870.0168
ARG 1880.0269
HIS 1890.0249
ASN 1900.0214
SER 1910.0130
TYR 1920.0144
THR 1930.0147
CYS 1940.0049
GLU 1950.0048
ALA 1960.0051
THR 1970.0103
HIS 1980.0141
LYS 1990.0172
THR 2000.0186
SER 2010.0137
THR 2020.0272
SER 2030.0159
PRO 2040.0119
ILE 2050.0113
VAL 2060.0085
LYS 2070.0094
SER 2080.0104
PHE 2090.0244
ASN 2100.0254
ARG 2110.0194
ASN 2120.0479
GLU 2130.0233
CYS 2140.0243

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.