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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 85  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0589
ILE 4210.0435
PHE 4220.0217
ILE 4230.0222
SER 4240.0160
ASN 4250.0173
ASP 4260.0157
LYS 4270.0122
GLU 4280.0159
SER 4290.0154
ILE 4300.0093
LYS 4310.0093
CYS 4320.0080
PRO 4330.0057
CYS 4340.0054
GLU 4350.0045
PRO 4360.0053
GLU 4370.0062
ARG 4380.0055
ILE 4390.0181
SER 4400.0190
GLU 4410.0308
SER 4420.0337
THR 4430.0273
CYS 4440.0287
ASN 4450.0109
PHE 4460.0129
TYR 4470.0117
VAL 4480.0058
CYS 4490.0049
ASN 4500.0058
CYS 4510.0106
VAL 4520.0122
GLU 4530.0131
LYS 4540.0231
GLU 10.0044
VAL 20.0061
GLN 30.0099
LEU 40.0066
VAL 50.0073
GLU 60.0077
SER 70.0090
GLY 80.0090
GLY 90.0072
GLY 100.0056
LEU 110.0039
VAL 120.0050
LYS 130.0078
PRO 140.0134
GLY 150.0126
GLY 160.0081
SER 170.0073
LEU 180.0063
LYS 190.0061
LEU 200.0069
SER 210.0083
CYS 220.0092
ALA 230.0096
ALA 240.0103
SER 250.0076
GLY 260.0063
PHE 270.0069
ILE 280.0076
PHE 290.0086
SER 300.0099
ASP 310.0089
TYR 320.0074
TYR 330.0079
MET 340.0043
TYR 350.0049
TRP 360.0050
VAL 370.0036
ARG 380.0039
GLN 390.0037
THR 400.0060
PRO 410.0071
GLU 420.0063
LYS 430.0071
ARG 440.0062
LEU 450.0036
GLU 460.0046
TRP 470.0060
VAL 480.0076
ALA 490.0104
THR 500.0097
ILE 510.0101
SER 520.0146
ASP 520.0156
GLY 530.0202
ASN 540.0252
SER 550.0210
TYR 560.0146
THR 570.0172
TYR 580.0099
TYR 590.0111
VAL 600.0132
ASP 610.0119
SER 620.0105
VAL 630.0093
LYS 640.0090
GLY 650.0104
ARG 660.0113
PHE 670.0048
THR 680.0047
ILE 690.0042
SER 700.0063
ARG 710.0047
ASP 720.0024
ASN 730.0087
ALA 740.0155
LYS 750.0116
ASN 760.0037
ASN 770.0052
LEU 780.0068
TYR 790.0055
LEU 800.0043
GLN 810.0051
MET 820.0098
SER 820.0102
SER 820.0112
LEU 820.0107
LYS 830.0118
SER 840.0118
GLU 850.0117
ASP 860.0095
THR 870.0072
ALA 880.0039
ILE 890.0030
TYR 900.0040
TYR 910.0047
CYS 920.0049
ALA 930.0044
ARG 940.0032
ASP 950.0052
GLY 960.0063
PRO 970.0161
THR 980.0228
ASP 990.0252
SER 1000.0102
SER 1000.0096
GLY 1000.0092
TYR 1000.0082
GLY 1000.0072
GLY 1000.0072
PHE 1000.0069
GLY 1010.0080
TYR 1020.0077
TRP 1030.0056
GLY 1040.0032
GLN 1050.0004
GLY 1060.0037
THR 1070.0054
LEU 1080.0055
VAL 1090.0063
THR 1100.0047
VAL 1110.0057
SER 1120.0134
GLU 1130.0110
ALA 1140.0048
LYS 1150.0249
THR 1160.0150
THR 1170.0132
PRO 1180.0107
PRO 1190.0102
SER 1200.0114
VAL 1210.0090
TYR 1220.0071
PRO 1230.0076
LEU 1240.0057
ALA 1250.0102
PRO 1260.0121
GLY 1270.0173
SER 1280.0270
ALA 1290.0299
ALA 1300.0302
GLN 1330.0281
THR 1340.0251
ASN 1350.0255
SER 1360.0114
MET 1370.0030
VAL 1380.0071
THR 1390.0091
LEU 1400.0073
GLY 1410.0065
CYS 1420.0057
LEU 1430.0065
VAL 1440.0110
LYS 1450.0113
GLY 1460.0140
TYR 1470.0151
PHE 1480.0122
PRO 1490.0120
GLU 1500.0112
PRO 1510.0185
VAL 1520.0170
THR 1530.0206
VAL 1540.0150
THR 1560.0090
TRP 1570.0058
ASN 1620.0093
SER 1630.0102
GLY 1640.0081
SER 1650.0219
LEU 1660.0148
SER 1670.0082
SER 1680.0109
GLY 1690.0122
VAL 1710.0112
HIS 1720.0133
THR 1730.0114
PHE 1740.0121
PRO 1750.0125
ALA 1760.0101
VAL 1770.0199
LEU 1780.0148
GLN 1790.0482
SER 1800.0442
ASP 1830.0171
LEU 1840.0159
TYR 1850.0100
THR 1860.0125
LEU 1870.0102
SER 1880.0092
SER 1890.0099
SER 1900.0113
VAL 1910.0105
THR 1920.0043
VAL 1930.0070
PRO 1940.0098
SER 1950.0185
SER 1960.0291
PRO 1980.0135
ARG 1990.0066
PRO 2000.0126
SER 2020.0047
GLU 2030.0146
THR 2040.0169
VAL 2050.0022
THR 2060.0046
CYS 2080.0093
ASN 2090.0101
VAL 2100.0136
ALA 2110.0173
HIS 2120.0129
PRO 2130.0200
ALA 2140.0210
SER 2150.0198
SER 2160.0276
THR 2170.0082
LYS 2180.0123
VAL 2190.0168
ASP 2200.0115
LYS 2210.0122
LYS 2220.0118
ILE 2230.0119
VAL 2260.0288
PRO 2270.0278
ARG 2280.0235
ASP 2320.0576
CYS 2330.0411
SER 20.0111
VAL 30.0165
LEU 40.0161
SER 50.0115
GLN 60.0094
SER 70.0080
PRO 80.0094
ALA 90.0117
ILE 100.0106
LEU 110.0192
SER 120.0195
ALA 130.0198
SER 140.0259
PRO 150.0147
GLY 160.0087
GLU 170.0187
LYS 180.0228
VAL 190.0260
THR 200.0112
MET 210.0047
THR 220.0037
CYS 230.0101
ARG 240.0105
ALA 250.0084
ARG 260.0155
SER 270.0164
SER 290.0090
VAL 300.0100
SER 310.0136
TYR 320.0094
MET 330.0096
HIS 340.0104
TRP 350.0062
TYR 360.0073
GLN 370.0080
GLN 380.0061
LYS 390.0045
SER 400.0047
GLY 410.0236
SER 420.0146
SER 430.0068
PRO 440.0092
LYS 450.0109
PRO 460.0106
TRP 470.0127
ILE 480.0110
HIS 490.0104
ALA 500.0109
THR 510.0097
SER 520.0060
ASN 530.0093
LEU 540.0119
ALA 550.0126
SER 560.0175
GLY 570.0193
VAL 580.0177
PRO 590.0218
ALA 600.0246
ARG 610.0230
PHE 620.0162
SER 630.0125
GLY 640.0091
SER 650.0047
GLY 660.0113
SER 670.0172
GLY 680.0145
THR 690.0134
SER 700.0148
TYR 710.0074
SER 720.0048
LEU 730.0055
THR 740.0190
ILE 750.0205
SER 760.0233
ARG 770.0176
VAL 780.0168
GLU 790.0101
ALA 800.0106
GLU 810.0098
ASP 820.0125
ALA 830.0059
ALA 840.0057
THR 850.0056
TYR 860.0044
TYR 870.0054
CYS 880.0074
GLN 890.0086
GLN 900.0080
TRP 910.0074
SER 920.0106
SER 930.0116
HIS 940.0120
PRO 950.0101
PRO 960.0073
THR 970.0070
PHE 980.0072
GLY 990.0115
SER 1000.0116
GLY 1010.0118
THR 1020.0107
LYS 1030.0101
LEU 1040.0137
GLU 1050.0153
ILE 1060.0142
LYS 1070.0235
ARG 1080.0229
ALA 1090.0226
ASP 1100.0153
ALA 1110.0111
ALA 1120.0113
PRO 1130.0175
THR 1140.0181
VAL 1150.0171
SER 1160.0081
ILE 1170.0048
PHE 1180.0071
PRO 1190.0118
PRO 1200.0146
SER 1210.0107
SER 1220.0197
GLU 1230.0112
GLN 1240.0037
LEU 1250.0089
THR 1260.0225
SER 1270.0236
GLY 1280.0120
GLY 1290.0133
ALA 1300.0189
SER 1310.0187
VAL 1320.0169
VAL 1330.0110
CYS 1340.0090
PHE 1350.0119
LEU 1360.0160
ASN 1370.0177
ASN 1380.0138
PHE 1390.0129
TYR 1400.0133
PRO 1410.0173
LYS 1420.0225
ASP 1430.0129
ILE 1440.0139
ASN 1450.0170
VAL 1460.0074
LYS 1470.0102
TRP 1480.0169
LYS 1490.0217
ILE 1500.0201
ASP 1510.0257
GLY 1520.0258
SER 1530.0264
GLU 1540.0232
ARG 1550.0278
GLN 1560.0362
ASN 1570.0417
GLY 1580.0249
VAL 1590.0166
LEU 1600.0112
ASN 1610.0131
SER 1620.0156
TRP 1630.0207
THR 1640.0190
ASP 1650.0200
GLN 1660.0157
ASP 1670.0188
SER 1680.0102
LYS 1690.0255
ASP 1700.0164
SER 1710.0223
THR 1720.0181
TYR 1730.0148
SER 1740.0164
MET 1750.0199
SER 1760.0136
SER 1770.0079
THR 1780.0114
LEU 1790.0233
THR 1800.0217
LEU 1810.0222
THR 1820.0218
LYS 1830.0099
ASP 1840.0149
GLU 1850.0120
TYR 1860.0051
GLU 1870.0122
ARG 1880.0225
HIS 1890.0235
ASN 1900.0350
SER 1910.0227
TYR 1920.0183
THR 1930.0171
CYS 1940.0072
GLU 1950.0047
ALA 1960.0125
THR 1970.0153
HIS 1980.0140
LYS 1990.0145
THR 2000.0171
SER 2010.0166
THR 2020.0131
SER 2030.0251
PRO 2040.0213
ILE 2050.0278
VAL 2060.0183
LYS 2070.0095
SER 2080.0068
PHE 2090.0215
ASN 2100.0302
ARG 2110.0334
ASN 2120.0306
GLU 2130.0315
CYS 2140.0589

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.