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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 86  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1033
ILE 4210.1033
PHE 4220.0389
ILE 4230.0440
SER 4240.0232
ASN 4250.0250
ASP 4260.0194
LYS 4270.0127
GLU 4280.0243
SER 4290.0243
ILE 4300.0216
LYS 4310.0213
CYS 4320.0099
PRO 4330.0143
CYS 4340.0130
GLU 4350.0115
PRO 4360.0117
GLU 4370.0114
ARG 4380.0084
ILE 4390.0258
SER 4400.0309
GLU 4410.0531
SER 4420.0537
THR 4430.0473
CYS 4440.0477
ASN 4450.0157
PHE 4460.0176
TYR 4470.0157
VAL 4480.0081
CYS 4490.0087
ASN 4500.0099
CYS 4510.0218
VAL 4520.0259
GLU 4530.0268
LYS 4540.0716
GLU 10.0261
VAL 20.0153
GLN 30.0318
LEU 40.0087
VAL 50.0027
GLU 60.0087
SER 70.0126
GLY 80.0121
GLY 90.0128
GLY 100.0190
LEU 110.0169
VAL 120.0144
LYS 130.0146
PRO 140.0103
GLY 150.0138
GLY 160.0128
SER 170.0075
LEU 180.0040
LYS 190.0100
LEU 200.0104
SER 210.0115
CYS 220.0063
ALA 230.0049
ALA 240.0107
SER 250.0178
GLY 260.0163
PHE 270.0162
ILE 280.0219
PHE 290.0156
SER 300.0174
ASP 310.0149
TYR 320.0110
TYR 330.0094
MET 340.0073
TYR 350.0061
TRP 360.0065
VAL 370.0047
ARG 380.0050
GLN 390.0079
THR 400.0177
PRO 410.0137
GLU 420.0276
LYS 430.0106
ARG 440.0134
LEU 450.0092
GLU 460.0014
TRP 470.0032
VAL 480.0038
ALA 490.0087
THR 500.0069
ILE 510.0059
SER 520.0080
ASP 520.0110
GLY 530.0211
ASN 540.0361
SER 550.0248
TYR 560.0145
THR 570.0020
TYR 580.0044
TYR 590.0056
VAL 600.0083
ASP 610.0206
SER 620.0187
VAL 630.0099
LYS 640.0131
GLY 650.0118
ARG 660.0113
PHE 670.0092
THR 680.0109
ILE 690.0117
SER 700.0150
ARG 710.0104
ASP 720.0084
ASN 730.0143
ALA 740.0136
LYS 750.0195
ASN 760.0130
ASN 770.0085
LEU 780.0086
TYR 790.0138
LEU 800.0117
GLN 810.0103
MET 820.0061
SER 820.0093
SER 820.0143
LEU 820.0066
LYS 830.0073
SER 840.0018
GLU 850.0108
ASP 860.0082
THR 870.0150
ALA 880.0137
ILE 890.0112
TYR 900.0083
TYR 910.0065
CYS 920.0052
ALA 930.0072
ARG 940.0115
ASP 950.0082
GLY 960.0095
PRO 970.0235
THR 980.0316
ASP 990.0337
SER 1000.0122
SER 1000.0092
GLY 1000.0079
TYR 1000.0093
GLY 1000.0085
GLY 1000.0072
PHE 1000.0073
GLY 1010.0080
TYR 1020.0109
TRP 1030.0015
GLY 1040.0034
GLN 1050.0079
GLY 1060.0102
THR 1070.0093
LEU 1080.0102
VAL 1090.0145
THR 1100.0143
VAL 1110.0101
SER 1120.0141
GLU 1130.0144
ALA 1140.0131
LYS 1150.0209
THR 1160.0125
THR 1170.0150
PRO 1180.0146
PRO 1190.0159
SER 1200.0173
VAL 1210.0088
TYR 1220.0072
PRO 1230.0064
LEU 1240.0061
ALA 1250.0095
PRO 1260.0106
GLY 1270.0130
SER 1280.0094
ALA 1290.0257
ALA 1300.0113
GLN 1330.0102
THR 1340.0141
ASN 1350.0277
SER 1360.0116
MET 1370.0079
VAL 1380.0124
THR 1390.0076
LEU 1400.0050
GLY 1410.0050
CYS 1420.0106
LEU 1430.0117
VAL 1440.0140
LYS 1450.0177
GLY 1460.0155
TYR 1470.0138
PHE 1480.0055
PRO 1490.0045
GLU 1500.0072
PRO 1510.0106
VAL 1520.0092
THR 1530.0125
VAL 1540.0114
THR 1560.0065
TRP 1570.0084
ASN 1620.0152
SER 1630.0139
GLY 1640.0130
SER 1650.0273
LEU 1660.0140
SER 1670.0111
SER 1680.0132
GLY 1690.0090
VAL 1710.0065
HIS 1720.0062
THR 1730.0103
PHE 1740.0065
PRO 1750.0073
ALA 1760.0083
VAL 1770.0088
LEU 1780.0102
GLN 1790.0242
SER 1800.0168
ASP 1830.0111
LEU 1840.0065
TYR 1850.0067
THR 1860.0127
LEU 1870.0128
SER 1880.0137
SER 1890.0092
SER 1900.0063
VAL 1910.0065
THR 1920.0103
VAL 1930.0082
PRO 1940.0084
SER 1950.0089
SER 1960.0206
PRO 1980.0165
ARG 1990.0116
PRO 2000.0102
SER 2020.0141
GLU 2030.0107
THR 2040.0099
VAL 2050.0030
THR 2060.0070
CYS 2080.0112
ASN 2090.0121
VAL 2100.0113
ALA 2110.0103
HIS 2120.0074
PRO 2130.0088
ALA 2140.0153
SER 2150.0154
SER 2160.0141
THR 2170.0083
LYS 2180.0160
VAL 2190.0110
ASP 2200.0071
LYS 2210.0017
LYS 2220.0031
ILE 2230.0073
VAL 2260.0158
PRO 2270.0224
ARG 2280.0209
ASP 2320.0567
CYS 2330.0444
SER 20.0139
VAL 30.0159
LEU 40.0183
SER 50.0226
GLN 60.0183
SER 70.0181
PRO 80.0083
ALA 90.0045
ILE 100.0086
LEU 110.0125
SER 120.0132
ALA 130.0112
SER 140.0161
PRO 150.0127
GLY 160.0134
GLU 170.0084
LYS 180.0078
VAL 190.0083
THR 200.0063
MET 210.0084
THR 220.0122
CYS 230.0184
ARG 240.0193
ALA 250.0155
ARG 260.0077
SER 270.0075
SER 290.0051
VAL 300.0073
SER 310.0066
TYR 320.0084
MET 330.0090
HIS 340.0100
TRP 350.0068
TYR 360.0055
GLN 370.0052
GLN 380.0066
LYS 390.0129
SER 400.0168
GLY 410.0237
SER 420.0173
SER 430.0081
PRO 440.0047
LYS 450.0049
PRO 460.0064
TRP 470.0068
ILE 480.0103
HIS 490.0118
ALA 500.0121
THR 510.0119
SER 520.0121
ASN 530.0150
LEU 540.0098
ALA 550.0076
SER 560.0110
GLY 570.0084
VAL 580.0080
PRO 590.0062
ALA 600.0076
ARG 610.0062
PHE 620.0034
SER 630.0042
GLY 640.0074
SER 650.0099
GLY 660.0081
SER 670.0082
GLY 680.0061
THR 690.0104
SER 700.0160
TYR 710.0087
SER 720.0070
LEU 730.0051
THR 740.0044
ILE 750.0040
SER 760.0049
ARG 770.0125
VAL 780.0089
GLU 790.0062
ALA 800.0073
GLU 810.0091
ASP 820.0100
ALA 830.0123
ALA 840.0086
THR 850.0051
TYR 860.0038
TYR 870.0059
CYS 880.0092
GLN 890.0066
GLN 900.0061
TRP 910.0086
SER 920.0091
SER 930.0098
HIS 940.0119
PRO 950.0106
PRO 960.0093
THR 970.0068
PHE 980.0081
GLY 990.0108
SER 1000.0137
GLY 1010.0087
THR 1020.0023
LYS 1030.0054
LEU 1040.0124
GLU 1050.0122
ILE 1060.0106
LYS 1070.0159
ARG 1080.0161
ALA 1090.0190
ASP 1100.0107
ALA 1110.0119
ALA 1120.0126
PRO 1130.0077
THR 1140.0084
VAL 1150.0081
SER 1160.0042
ILE 1170.0058
PHE 1180.0048
PRO 1190.0034
PRO 1200.0038
SER 1210.0020
SER 1220.0079
GLU 1230.0075
GLN 1240.0049
LEU 1250.0060
THR 1260.0105
SER 1270.0102
GLY 1280.0070
GLY 1290.0055
ALA 1300.0074
SER 1310.0079
VAL 1320.0078
VAL 1330.0065
CYS 1340.0078
PHE 1350.0053
LEU 1360.0053
ASN 1370.0072
ASN 1380.0075
PHE 1390.0084
TYR 1400.0086
PRO 1410.0082
LYS 1420.0073
ASP 1430.0131
ILE 1440.0069
ASN 1450.0067
VAL 1460.0019
LYS 1470.0033
TRP 1480.0065
LYS 1490.0080
ILE 1500.0067
ASP 1510.0077
GLY 1520.0077
SER 1530.0079
GLU 1540.0053
ARG 1550.0084
GLN 1560.0130
ASN 1570.0155
GLY 1580.0091
VAL 1590.0068
LEU 1600.0030
ASN 1610.0044
SER 1620.0035
TRP 1630.0028
THR 1640.0040
ASP 1650.0085
GLN 1660.0074
ASP 1670.0060
SER 1680.0108
LYS 1690.0061
ASP 1700.0046
SER 1710.0075
THR 1720.0066
TYR 1730.0046
SER 1740.0042
MET 1750.0047
SER 1760.0056
SER 1770.0054
THR 1780.0059
LEU 1790.0106
THR 1800.0103
LEU 1810.0107
THR 1820.0147
LYS 1830.0078
ASP 1840.0105
GLU 1850.0118
TYR 1860.0056
GLU 1870.0027
ARG 1880.0133
HIS 1890.0078
ASN 1900.0118
SER 1910.0083
TYR 1920.0079
THR 1930.0088
CYS 1940.0061
GLU 1950.0034
ALA 1960.0054
THR 1970.0084
HIS 1980.0057
LYS 1990.0122
THR 2000.0130
SER 2010.0173
THR 2020.0282
SER 2030.0275
PRO 2040.0192
ILE 2050.0073
VAL 2060.0029
LYS 2070.0053
SER 2080.0078
PHE 2090.0095
ASN 2100.0127
ARG 2110.0135
ASN 2120.0179
GLU 2130.0145
CYS 2140.0209

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.