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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0635
ILE 4210.0365
PHE 4220.0159
ILE 4230.0193
SER 4240.0133
ASN 4250.0231
ASP 4260.0220
LYS 4270.0063
GLU 4280.0099
SER 4290.0098
ILE 4300.0088
LYS 4310.0105
CYS 4320.0042
PRO 4330.0038
CYS 4340.0036
GLU 4350.0041
PRO 4360.0053
GLU 4370.0088
ARG 4380.0095
ILE 4390.0216
SER 4400.0190
GLU 4410.0209
SER 4420.0246
THR 4430.0368
CYS 4440.0365
ASN 4450.0198
PHE 4460.0164
TYR 4470.0159
VAL 4480.0049
CYS 4490.0046
ASN 4500.0067
CYS 4510.0026
VAL 4520.0091
GLU 4530.0144
LYS 4540.0476
GLU 10.0461
VAL 20.0353
GLN 30.0205
LEU 40.0192
VAL 50.0140
GLU 60.0137
SER 70.0086
GLY 80.0116
GLY 90.0128
GLY 100.0101
LEU 110.0055
VAL 120.0087
LYS 130.0225
PRO 140.0134
GLY 150.0142
GLY 160.0161
SER 170.0129
LEU 180.0173
LYS 190.0178
LEU 200.0160
SER 210.0145
CYS 220.0194
ALA 230.0168
ALA 240.0234
SER 250.0331
GLY 260.0335
PHE 270.0370
ILE 280.0260
PHE 290.0235
SER 300.0214
ASP 310.0146
TYR 320.0159
TYR 330.0158
MET 340.0115
TYR 350.0113
TRP 360.0110
VAL 370.0073
ARG 380.0071
GLN 390.0058
THR 400.0086
PRO 410.0100
GLU 420.0038
LYS 430.0104
ARG 440.0038
LEU 450.0047
GLU 460.0059
TRP 470.0078
VAL 480.0093
ALA 490.0104
THR 500.0103
ILE 510.0107
SER 520.0120
ASP 520.0042
GLY 530.0108
ASN 540.0196
SER 550.0179
TYR 560.0187
THR 570.0194
TYR 580.0118
TYR 590.0137
VAL 600.0183
ASP 610.0268
SER 620.0211
VAL 630.0122
LYS 640.0140
GLY 650.0128
ARG 660.0099
PHE 670.0090
THR 680.0118
ILE 690.0157
SER 700.0233
ARG 710.0148
ASP 720.0075
ASN 730.0052
ALA 740.0193
LYS 750.0144
ASN 760.0100
ASN 770.0102
LEU 780.0157
TYR 790.0169
LEU 800.0167
GLN 810.0167
MET 820.0116
SER 820.0089
SER 820.0128
LEU 820.0095
LYS 830.0139
SER 840.0134
GLU 850.0143
ASP 860.0122
THR 870.0077
ALA 880.0057
ILE 890.0063
TYR 900.0076
TYR 910.0107
CYS 920.0126
ALA 930.0130
ARG 940.0235
ASP 950.0213
GLY 960.0208
PRO 970.0259
THR 980.0219
ASP 990.0139
SER 1000.0127
SER 1000.0112
GLY 1000.0096
TYR 1000.0092
GLY 1000.0103
GLY 1000.0120
PHE 1000.0143
GLY 1010.0151
TYR 1020.0177
TRP 1030.0125
GLY 1040.0133
GLN 1050.0115
GLY 1060.0060
THR 1070.0075
LEU 1080.0102
VAL 1090.0105
THR 1100.0066
VAL 1110.0081
SER 1120.0152
GLU 1130.0189
ALA 1140.0142
LYS 1150.0195
THR 1160.0103
THR 1170.0058
PRO 1180.0101
PRO 1190.0144
SER 1200.0174
VAL 1210.0112
TYR 1220.0088
PRO 1230.0052
LEU 1240.0055
ALA 1250.0146
PRO 1260.0204
GLY 1270.0203
SER 1280.0238
ALA 1290.0635
ALA 1300.0328
GLN 1330.0436
THR 1340.0236
ASN 1350.0112
SER 1360.0282
MET 1370.0148
VAL 1380.0157
THR 1390.0144
LEU 1400.0111
GLY 1410.0076
CYS 1420.0059
LEU 1430.0115
VAL 1440.0152
LYS 1450.0186
GLY 1460.0132
TYR 1470.0116
PHE 1480.0063
PRO 1490.0093
GLU 1500.0144
PRO 1510.0184
VAL 1520.0167
THR 1530.0184
VAL 1540.0089
THR 1560.0103
TRP 1570.0093
ASN 1620.0106
SER 1630.0131
GLY 1640.0188
SER 1650.0165
LEU 1660.0115
SER 1670.0184
SER 1680.0135
GLY 1690.0135
VAL 1710.0095
HIS 1720.0036
THR 1730.0080
PHE 1740.0137
PRO 1750.0161
ALA 1760.0184
VAL 1770.0228
LEU 1780.0144
GLN 1790.0194
SER 1800.0224
ASP 1830.0161
LEU 1840.0069
TYR 1850.0122
THR 1860.0190
LEU 1870.0174
SER 1880.0154
SER 1890.0054
SER 1900.0034
VAL 1910.0089
THR 1920.0189
VAL 1930.0147
PRO 1940.0097
SER 1950.0207
SER 1960.0360
PRO 1980.0340
ARG 1990.0306
PRO 2000.0308
SER 2020.0394
GLU 2030.0325
THR 2040.0303
VAL 2050.0097
THR 2060.0100
CYS 2080.0097
ASN 2090.0065
VAL 2100.0070
ALA 2110.0188
HIS 2120.0175
PRO 2130.0179
ALA 2140.0192
SER 2150.0160
SER 2160.0209
THR 2170.0128
LYS 2180.0145
VAL 2190.0182
ASP 2200.0085
LYS 2210.0047
LYS 2220.0039
ILE 2230.0135
VAL 2260.0183
PRO 2270.0292
ARG 2280.0264
ASP 2320.0522
CYS 2330.0331
SER 20.0083
VAL 30.0044
LEU 40.0061
SER 50.0113
GLN 60.0110
SER 70.0167
PRO 80.0187
ALA 90.0173
ILE 100.0183
LEU 110.0159
SER 120.0163
ALA 130.0172
SER 140.0215
PRO 150.0135
GLY 160.0164
GLU 170.0199
LYS 180.0227
VAL 190.0210
THR 200.0120
MET 210.0124
THR 220.0150
CYS 230.0149
ARG 240.0166
ALA 250.0160
ARG 260.0177
SER 270.0321
SER 290.0219
VAL 300.0096
SER 310.0094
TYR 320.0128
MET 330.0130
HIS 340.0157
TRP 350.0117
TYR 360.0119
GLN 370.0121
GLN 380.0109
LYS 390.0101
SER 400.0123
GLY 410.0161
SER 420.0129
SER 430.0120
PRO 440.0122
LYS 450.0110
PRO 460.0121
TRP 470.0134
ILE 480.0173
HIS 490.0192
ALA 500.0230
THR 510.0209
SER 520.0236
ASN 530.0252
LEU 540.0203
ALA 550.0137
SER 560.0248
GLY 570.0181
VAL 580.0222
PRO 590.0332
ALA 600.0350
ARG 610.0263
PHE 620.0141
SER 630.0144
GLY 640.0192
SER 650.0243
GLY 660.0185
SER 670.0151
GLY 680.0118
THR 690.0199
SER 700.0231
TYR 710.0099
SER 720.0101
LEU 730.0106
THR 740.0105
ILE 750.0114
SER 760.0159
ARG 770.0181
VAL 780.0110
GLU 790.0146
ALA 800.0143
GLU 810.0205
ASP 820.0197
ALA 830.0109
ALA 840.0094
THR 850.0110
TYR 860.0080
TYR 870.0085
CYS 880.0092
GLN 890.0106
GLN 900.0073
TRP 910.0058
SER 920.0067
SER 930.0110
HIS 940.0144
PRO 950.0130
PRO 960.0095
THR 970.0085
PHE 980.0043
GLY 990.0040
SER 1000.0050
GLY 1010.0066
THR 1020.0051
LYS 1030.0102
LEU 1040.0121
GLU 1050.0111
ILE 1060.0075
LYS 1070.0147
ARG 1080.0128
ALA 1090.0130
ASP 1100.0090
ALA 1110.0092
ALA 1120.0088
PRO 1130.0024
THR 1140.0025
VAL 1150.0022
SER 1160.0031
ILE 1170.0028
PHE 1180.0054
PRO 1190.0055
PRO 1200.0059
SER 1210.0062
SER 1220.0130
GLU 1230.0096
GLN 1240.0088
LEU 1250.0132
THR 1260.0177
SER 1270.0145
GLY 1280.0108
GLY 1290.0069
ALA 1300.0077
SER 1310.0037
VAL 1320.0022
VAL 1330.0014
CYS 1340.0028
PHE 1350.0028
LEU 1360.0028
ASN 1370.0048
ASN 1380.0051
PHE 1390.0041
TYR 1400.0039
PRO 1410.0018
LYS 1420.0035
ASP 1430.0082
ILE 1440.0031
ASN 1450.0035
VAL 1460.0015
LYS 1470.0015
TRP 1480.0020
LYS 1490.0064
ILE 1500.0083
ASP 1510.0064
GLY 1520.0052
SER 1530.0121
GLU 1540.0098
ARG 1550.0020
GLN 1560.0043
ASN 1570.0086
GLY 1580.0052
VAL 1590.0046
LEU 1600.0051
ASN 1610.0092
SER 1620.0105
TRP 1630.0086
THR 1640.0092
ASP 1650.0102
GLN 1660.0097
ASP 1670.0086
SER 1680.0199
LYS 1690.0270
ASP 1700.0119
SER 1710.0097
THR 1720.0107
TYR 1730.0069
SER 1740.0063
MET 1750.0068
SER 1760.0054
SER 1770.0050
THR 1780.0049
LEU 1790.0021
THR 1800.0037
LEU 1810.0048
THR 1820.0105
LYS 1830.0085
ASP 1840.0083
GLU 1850.0134
TYR 1860.0107
GLU 1870.0069
ARG 1880.0144
HIS 1890.0126
ASN 1900.0077
SER 1910.0065
TYR 1920.0078
THR 1930.0070
CYS 1940.0022
GLU 1950.0018
ALA 1960.0025
THR 1970.0056
HIS 1980.0086
LYS 1990.0178
THR 2000.0144
SER 2010.0136
THR 2020.0272
SER 2030.0154
PRO 2040.0114
ILE 2050.0073
VAL 2060.0034
LYS 2070.0055
SER 2080.0081
PHE 2090.0079
ASN 2100.0080
ARG 2110.0078
ASN 2120.0173
GLU 2130.0116
CYS 2140.0087

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.