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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0597
ILE 4210.0229
PHE 4220.0080
ILE 4230.0219
SER 4240.0143
ASN 4250.0081
ASP 4260.0074
LYS 4270.0089
GLU 4280.0051
SER 4290.0092
ILE 4300.0084
LYS 4310.0033
CYS 4320.0122
PRO 4330.0168
CYS 4340.0160
GLU 4350.0142
PRO 4360.0196
GLU 4370.0160
ARG 4380.0086
ILE 4390.0105
SER 4400.0164
GLU 4410.0424
SER 4420.0283
THR 4430.0300
CYS 4440.0232
ASN 4450.0045
PHE 4460.0091
TYR 4470.0149
VAL 4480.0176
CYS 4490.0192
ASN 4500.0208
CYS 4510.0257
VAL 4520.0299
GLU 4530.0337
LYS 4540.0437
GLU 10.0060
VAL 20.0042
GLN 30.0110
LEU 40.0125
VAL 50.0124
GLU 60.0143
SER 70.0188
GLY 80.0201
GLY 90.0129
GLY 100.0061
LEU 110.0065
VAL 120.0044
LYS 130.0075
PRO 140.0104
GLY 150.0060
GLY 160.0040
SER 170.0067
LEU 180.0122
LYS 190.0173
LEU 200.0157
SER 210.0172
CYS 220.0178
ALA 230.0163
ALA 240.0147
SER 250.0089
GLY 260.0043
PHE 270.0051
ILE 280.0063
PHE 290.0063
SER 300.0076
ASP 310.0071
TYR 320.0082
TYR 330.0091
MET 340.0022
TYR 350.0019
TRP 360.0029
VAL 370.0079
ARG 380.0064
GLN 390.0053
THR 400.0013
PRO 410.0040
GLU 420.0081
LYS 430.0060
ARG 440.0050
LEU 450.0084
GLU 460.0030
TRP 470.0048
VAL 480.0056
ALA 490.0069
THR 500.0058
ILE 510.0089
SER 520.0112
ASP 520.0162
GLY 530.0164
ASN 540.0206
SER 550.0200
TYR 560.0136
THR 570.0128
TYR 580.0051
TYR 590.0061
VAL 600.0066
ASP 610.0003
SER 620.0031
VAL 630.0072
LYS 640.0089
GLY 650.0148
ARG 660.0148
PHE 670.0140
THR 680.0159
ILE 690.0158
SER 700.0187
ARG 710.0137
ASP 720.0088
ASN 730.0080
ALA 740.0118
LYS 750.0156
ASN 760.0106
ASN 770.0119
LEU 780.0137
TYR 790.0164
LEU 800.0160
GLN 810.0169
MET 820.0137
SER 820.0093
SER 820.0057
LEU 820.0077
LYS 830.0071
SER 840.0105
GLU 850.0103
ASP 860.0097
THR 870.0084
ALA 880.0018
ILE 890.0055
TYR 900.0074
TYR 910.0135
CYS 920.0114
ALA 930.0085
ARG 940.0070
ASP 950.0069
GLY 960.0072
PRO 970.0143
THR 980.0233
ASP 990.0228
SER 1000.0052
SER 1000.0068
GLY 1000.0096
TYR 1000.0069
GLY 1000.0084
GLY 1000.0073
PHE 1000.0102
GLY 1010.0078
TYR 1020.0109
TRP 1030.0161
GLY 1040.0160
GLN 1050.0165
GLY 1060.0121
THR 1070.0083
LEU 1080.0028
VAL 1090.0072
THR 1100.0080
VAL 1110.0068
SER 1120.0210
GLU 1130.0181
ALA 1140.0091
LYS 1150.0216
THR 1160.0108
THR 1170.0118
PRO 1180.0084
PRO 1190.0036
SER 1200.0043
VAL 1210.0033
TYR 1220.0061
PRO 1230.0074
LEU 1240.0012
ALA 1250.0026
PRO 1260.0047
GLY 1270.0099
SER 1280.0085
ALA 1290.0054
ALA 1300.0149
GLN 1330.0157
THR 1340.0218
ASN 1350.0597
SER 1360.0267
MET 1370.0129
VAL 1380.0184
THR 1390.0050
LEU 1400.0053
GLY 1410.0075
CYS 1420.0088
LEU 1430.0048
VAL 1440.0038
LYS 1450.0083
GLY 1460.0090
TYR 1470.0096
PHE 1480.0122
PRO 1490.0131
GLU 1500.0155
PRO 1510.0184
VAL 1520.0085
THR 1530.0071
VAL 1540.0152
THR 1560.0201
TRP 1570.0146
ASN 1620.0173
SER 1630.0252
GLY 1640.0208
SER 1650.0233
LEU 1660.0119
SER 1670.0187
SER 1680.0207
GLY 1690.0080
VAL 1710.0127
HIS 1720.0110
THR 1730.0110
PHE 1740.0095
PRO 1750.0096
ALA 1760.0131
VAL 1770.0298
LEU 1780.0243
GLN 1790.0560
SER 1800.0334
ASP 1830.0350
LEU 1840.0247
TYR 1850.0185
THR 1860.0166
LEU 1870.0111
SER 1880.0094
SER 1890.0127
SER 1900.0117
VAL 1910.0099
THR 1920.0087
VAL 1930.0090
PRO 1940.0082
SER 1950.0156
SER 1960.0149
PRO 1980.0206
ARG 1990.0154
PRO 2000.0115
SER 2020.0153
GLU 2030.0262
THR 2040.0186
VAL 2050.0073
THR 2060.0152
CYS 2080.0202
ASN 2090.0214
VAL 2100.0225
ALA 2110.0151
HIS 2120.0071
PRO 2130.0179
ALA 2140.0275
SER 2150.0219
SER 2160.0300
THR 2170.0087
LYS 2180.0350
VAL 2190.0250
ASP 2200.0141
LYS 2210.0089
LYS 2220.0112
ILE 2230.0066
VAL 2260.0155
PRO 2270.0186
ARG 2280.0170
ASP 2320.0519
CYS 2330.0390
SER 20.0062
VAL 30.0110
LEU 40.0089
SER 50.0075
GLN 60.0103
SER 70.0188
PRO 80.0320
ALA 90.0278
ILE 100.0260
LEU 110.0166
SER 120.0133
ALA 130.0144
SER 140.0168
PRO 150.0123
GLY 160.0094
GLU 170.0111
LYS 180.0172
VAL 190.0165
THR 200.0085
MET 210.0099
THR 220.0130
CYS 230.0094
ARG 240.0069
ALA 250.0029
ARG 260.0216
SER 270.0203
SER 290.0071
VAL 300.0041
SER 310.0077
TYR 320.0045
MET 330.0019
HIS 340.0069
TRP 350.0120
TYR 360.0161
GLN 370.0206
GLN 380.0219
LYS 390.0280
SER 400.0360
GLY 410.0449
SER 420.0345
SER 430.0247
PRO 440.0218
LYS 450.0205
PRO 460.0133
TRP 470.0166
ILE 480.0149
HIS 490.0099
ALA 500.0055
THR 510.0065
SER 520.0154
ASN 530.0197
LEU 540.0225
ALA 550.0182
SER 560.0463
GLY 570.0315
VAL 580.0282
PRO 590.0207
ALA 600.0206
ARG 610.0191
PHE 620.0173
SER 630.0119
GLY 640.0071
SER 650.0054
GLY 660.0049
SER 670.0054
GLY 680.0052
THR 690.0012
SER 700.0062
TYR 710.0049
SER 720.0037
LEU 730.0051
THR 740.0103
ILE 750.0131
SER 760.0147
ARG 770.0126
VAL 780.0090
GLU 790.0094
ALA 800.0086
GLU 810.0101
ASP 820.0090
ALA 830.0130
ALA 840.0134
THR 850.0136
TYR 860.0113
TYR 870.0095
CYS 880.0081
GLN 890.0081
GLN 900.0067
TRP 910.0108
SER 920.0135
SER 930.0167
HIS 940.0197
PRO 950.0173
PRO 960.0135
THR 970.0111
PHE 980.0073
GLY 990.0075
SER 1000.0072
GLY 1010.0037
THR 1020.0075
LYS 1030.0055
LEU 1040.0073
GLU 1050.0078
ILE 1060.0095
LYS 1070.0144
ARG 1080.0179
ALA 1090.0211
ASP 1100.0052
ALA 1110.0053
ALA 1120.0061
PRO 1130.0096
THR 1140.0104
VAL 1150.0086
SER 1160.0049
ILE 1170.0032
PHE 1180.0010
PRO 1190.0069
PRO 1200.0075
SER 1210.0077
SER 1220.0148
GLU 1230.0148
GLN 1240.0116
LEU 1250.0109
THR 1260.0123
SER 1270.0132
GLY 1280.0052
GLY 1290.0067
ALA 1300.0097
SER 1310.0066
VAL 1320.0037
VAL 1330.0023
CYS 1340.0055
PHE 1350.0062
LEU 1360.0086
ASN 1370.0078
ASN 1380.0084
PHE 1390.0107
TYR 1400.0048
PRO 1410.0063
LYS 1420.0104
ASP 1430.0121
ILE 1440.0099
ASN 1450.0138
VAL 1460.0099
LYS 1470.0081
TRP 1480.0064
LYS 1490.0092
ILE 1500.0076
ASP 1510.0067
GLY 1520.0092
SER 1530.0137
GLU 1540.0108
ARG 1550.0107
GLN 1560.0058
ASN 1570.0079
GLY 1580.0147
VAL 1590.0092
LEU 1600.0141
ASN 1610.0064
SER 1620.0043
TRP 1630.0040
THR 1640.0070
ASP 1650.0118
GLN 1660.0110
ASP 1670.0202
SER 1680.0132
LYS 1690.0229
ASP 1700.0123
SER 1710.0123
THR 1720.0124
TYR 1730.0089
SER 1740.0073
MET 1750.0077
SER 1760.0066
SER 1770.0050
THR 1780.0077
LEU 1790.0091
THR 1800.0117
LEU 1810.0102
THR 1820.0130
LYS 1830.0083
ASP 1840.0063
GLU 1850.0114
TYR 1860.0080
GLU 1870.0057
ARG 1880.0154
HIS 1890.0116
ASN 1900.0066
SER 1910.0041
TYR 1920.0053
THR 1930.0062
CYS 1940.0033
GLU 1950.0037
ALA 1960.0054
THR 1970.0055
HIS 1980.0043
LYS 1990.0076
THR 2000.0151
SER 2010.0193
THR 2020.0420
SER 2030.0410
PRO 2040.0234
ILE 2050.0174
VAL 2060.0068
LYS 2070.0061
SER 2080.0052
PHE 2090.0067
ASN 2100.0078
ARG 2110.0062
ASN 2120.0128
GLU 2130.0141
CYS 2140.0153

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.