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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 89  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0901
ILE 4210.0146
PHE 4220.0090
ILE 4230.0148
SER 4240.0111
ASN 4250.0121
ASP 4260.0132
LYS 4270.0064
GLU 4280.0042
SER 4290.0062
ILE 4300.0046
LYS 4310.0030
CYS 4320.0050
PRO 4330.0066
CYS 4340.0068
GLU 4350.0066
PRO 4360.0083
GLU 4370.0072
ARG 4380.0044
ILE 4390.0142
SER 4400.0125
GLU 4410.0253
SER 4420.0181
THR 4430.0268
CYS 4440.0226
ASN 4450.0107
PHE 4460.0113
TYR 4470.0125
VAL 4480.0087
CYS 4490.0086
ASN 4500.0103
CYS 4510.0105
VAL 4520.0136
GLU 4530.0162
LYS 4540.0197
GLU 10.0043
VAL 20.0061
GLN 30.0093
LEU 40.0069
VAL 50.0078
GLU 60.0095
SER 70.0096
GLY 80.0127
GLY 90.0090
GLY 100.0148
LEU 110.0152
VAL 120.0130
LYS 130.0113
PRO 140.0035
GLY 150.0058
GLY 160.0048
SER 170.0085
LEU 180.0108
LYS 190.0116
LEU 200.0093
SER 210.0103
CYS 220.0102
ALA 230.0097
ALA 240.0092
SER 250.0030
GLY 260.0051
PHE 270.0096
ILE 280.0135
PHE 290.0101
SER 300.0097
ASP 310.0091
TYR 320.0076
TYR 330.0056
MET 340.0015
TYR 350.0038
TRP 360.0053
VAL 370.0074
ARG 380.0065
GLN 390.0063
THR 400.0044
PRO 410.0067
GLU 420.0074
LYS 430.0070
ARG 440.0051
LEU 450.0068
GLU 460.0032
TRP 470.0038
VAL 480.0041
ALA 490.0028
THR 500.0023
ILE 510.0022
SER 520.0057
ASP 520.0082
GLY 530.0087
ASN 540.0084
SER 550.0069
TYR 560.0046
THR 570.0039
TYR 580.0044
TYR 590.0040
VAL 600.0039
ASP 610.0187
SER 620.0162
VAL 630.0059
LYS 640.0092
GLY 650.0049
ARG 660.0024
PHE 670.0047
THR 680.0047
ILE 690.0041
SER 700.0062
ARG 710.0065
ASP 720.0061
ASN 730.0100
ALA 740.0134
LYS 750.0198
ASN 760.0105
ASN 770.0096
LEU 780.0086
TYR 790.0090
LEU 800.0075
GLN 810.0085
MET 820.0064
SER 820.0067
SER 820.0049
LEU 820.0020
LYS 830.0024
SER 840.0056
GLU 850.0052
ASP 860.0010
THR 870.0045
ALA 880.0038
ILE 890.0046
TYR 900.0065
TYR 910.0104
CYS 920.0092
ALA 930.0073
ARG 940.0046
ASP 950.0056
GLY 960.0094
PRO 970.0189
THR 980.0281
ASP 990.0296
SER 1000.0110
SER 1000.0085
GLY 1000.0076
TYR 1000.0055
GLY 1000.0045
GLY 1000.0053
PHE 1000.0054
GLY 1010.0052
TYR 1020.0045
TRP 1030.0094
GLY 1040.0105
GLN 1050.0118
GLY 1060.0085
THR 1070.0044
LEU 1080.0072
VAL 1090.0095
THR 1100.0117
VAL 1110.0097
SER 1120.0116
GLU 1130.0115
ALA 1140.0095
LYS 1150.0316
THR 1160.0206
THR 1170.0202
PRO 1180.0120
PRO 1190.0147
SER 1200.0195
VAL 1210.0078
TYR 1220.0052
PRO 1230.0077
LEU 1240.0040
ALA 1250.0036
PRO 1260.0091
GLY 1270.0200
SER 1280.0167
ALA 1290.0054
ALA 1300.0124
GLN 1330.0326
THR 1340.0262
ASN 1350.0418
SER 1360.0240
MET 1370.0207
VAL 1380.0249
THR 1390.0105
LEU 1400.0074
GLY 1410.0060
CYS 1420.0024
LEU 1430.0065
VAL 1440.0147
LYS 1450.0209
GLY 1460.0173
TYR 1470.0168
PHE 1480.0058
PRO 1490.0047
GLU 1500.0097
PRO 1510.0147
VAL 1520.0114
THR 1530.0113
VAL 1540.0067
THR 1560.0150
TRP 1570.0139
ASN 1620.0111
SER 1630.0179
GLY 1640.0288
SER 1650.0344
LEU 1660.0238
SER 1670.0387
SER 1680.0261
GLY 1690.0192
VAL 1710.0162
HIS 1720.0063
THR 1730.0093
PHE 1740.0140
PRO 1750.0182
ALA 1760.0200
VAL 1770.0162
LEU 1780.0130
GLN 1790.0379
SER 1800.0223
ASP 1830.0125
LEU 1840.0097
TYR 1850.0127
THR 1860.0172
LEU 1870.0168
SER 1880.0146
SER 1890.0046
SER 1900.0056
VAL 1910.0114
THR 1920.0166
VAL 1930.0073
PRO 1940.0058
SER 1950.0228
SER 1960.0375
PRO 1980.0256
ARG 1990.0169
PRO 2000.0144
SER 2020.0136
GLU 2030.0364
THR 2040.0315
VAL 2050.0115
THR 2060.0123
CYS 2080.0115
ASN 2090.0089
VAL 2100.0087
ALA 2110.0085
HIS 2120.0052
PRO 2130.0089
ALA 2140.0142
SER 2150.0154
SER 2160.0180
THR 2170.0094
LYS 2180.0110
VAL 2190.0102
ASP 2200.0063
LYS 2210.0099
LYS 2220.0168
ILE 2230.0052
VAL 2260.0238
PRO 2270.0285
ARG 2280.0245
ASP 2320.0901
CYS 2330.0654
SER 20.0088
VAL 30.0113
LEU 40.0103
SER 50.0125
GLN 60.0114
SER 70.0177
PRO 80.0214
ALA 90.0178
ILE 100.0157
LEU 110.0158
SER 120.0145
ALA 130.0138
SER 140.0100
PRO 150.0125
GLY 160.0104
GLU 170.0098
LYS 180.0120
VAL 190.0093
THR 200.0084
MET 210.0092
THR 220.0108
CYS 230.0106
ARG 240.0107
ALA 250.0052
ARG 260.0157
SER 270.0134
SER 290.0038
VAL 300.0025
SER 310.0032
TYR 320.0044
MET 330.0031
HIS 340.0039
TRP 350.0070
TYR 360.0096
GLN 370.0127
GLN 380.0163
LYS 390.0232
SER 400.0288
GLY 410.0392
SER 420.0285
SER 430.0171
PRO 440.0140
LYS 450.0123
PRO 460.0076
TRP 470.0121
ILE 480.0132
HIS 490.0113
ALA 500.0071
THR 510.0072
SER 520.0128
ASN 530.0186
LEU 540.0193
ALA 550.0153
SER 560.0317
GLY 570.0234
VAL 580.0227
PRO 590.0123
ALA 600.0111
ARG 610.0111
PHE 620.0112
SER 630.0084
GLY 640.0052
SER 650.0028
GLY 660.0062
SER 670.0085
GLY 680.0072
THR 690.0052
SER 700.0108
TYR 710.0057
SER 720.0039
LEU 730.0007
THR 740.0070
ILE 750.0093
SER 760.0114
ARG 770.0111
VAL 780.0074
GLU 790.0122
ALA 800.0036
GLU 810.0055
ASP 820.0054
ALA 830.0137
ALA 840.0124
THR 850.0109
TYR 860.0071
TYR 870.0045
CYS 880.0025
GLN 890.0031
GLN 900.0020
TRP 910.0041
SER 920.0053
SER 930.0079
HIS 940.0093
PRO 950.0074
PRO 960.0051
THR 970.0039
PHE 980.0026
GLY 990.0037
SER 1000.0034
GLY 1010.0042
THR 1020.0067
LYS 1030.0064
LEU 1040.0112
GLU 1050.0103
ILE 1060.0103
LYS 1070.0125
ARG 1080.0115
ALA 1090.0107
ASP 1100.0076
ALA 1110.0075
ALA 1120.0104
PRO 1130.0071
THR 1140.0083
VAL 1150.0086
SER 1160.0073
ILE 1170.0067
PHE 1180.0071
PRO 1190.0151
PRO 1200.0156
SER 1210.0150
SER 1220.0291
GLU 1230.0290
GLN 1240.0226
LEU 1250.0179
THR 1260.0200
SER 1270.0247
GLY 1280.0181
GLY 1290.0169
ALA 1300.0166
SER 1310.0119
VAL 1320.0100
VAL 1330.0070
CYS 1340.0042
PHE 1350.0035
LEU 1360.0030
ASN 1370.0062
ASN 1380.0072
PHE 1390.0071
TYR 1400.0058
PRO 1410.0074
LYS 1420.0106
ASP 1430.0190
ILE 1440.0138
ASN 1450.0128
VAL 1460.0118
LYS 1470.0122
TRP 1480.0117
LYS 1490.0136
ILE 1500.0143
ASP 1510.0112
GLY 1520.0357
SER 1530.0285
GLU 1540.0437
ARG 1550.0389
GLN 1560.0195
ASN 1570.0225
GLY 1580.0173
VAL 1590.0134
LEU 1600.0108
ASN 1610.0043
SER 1620.0055
TRP 1630.0069
THR 1640.0112
ASP 1650.0142
GLN 1660.0131
ASP 1670.0118
SER 1680.0093
LYS 1690.0091
ASP 1700.0120
SER 1710.0131
THR 1720.0131
TYR 1730.0075
SER 1740.0053
MET 1750.0046
SER 1760.0043
SER 1770.0050
THR 1780.0088
LEU 1790.0147
THR 1800.0167
LEU 1810.0180
THR 1820.0225
LYS 1830.0132
ASP 1840.0090
GLU 1850.0192
TYR 1860.0110
GLU 1870.0190
ARG 1880.0357
HIS 1890.0267
ASN 1900.0177
SER 1910.0077
TYR 1920.0091
THR 1930.0095
CYS 1940.0020
GLU 1950.0012
ALA 1960.0064
THR 1970.0100
HIS 1980.0113
LYS 1990.0140
THR 2000.0179
SER 2010.0149
THR 2020.0182
SER 2030.0178
PRO 2040.0108
ILE 2050.0102
VAL 2060.0126
LYS 2070.0088
SER 2080.0073
PHE 2090.0116
ASN 2100.0205
ARG 2110.0219
ASN 2120.0378
GLU 2130.0305
CYS 2140.0431

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.