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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 9  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0448
ILE 4210.0213
PHE 4220.0193
ILE 4230.0198
SER 4240.0222
ASN 4250.0241
ASP 4260.0242
LYS 4270.0192
GLU 4280.0203
SER 4290.0213
ILE 4300.0179
LYS 4310.0168
CYS 4320.0131
PRO 4330.0117
CYS 4340.0108
GLU 4350.0117
PRO 4360.0123
GLU 4370.0114
ARG 4380.0146
ILE 4390.0161
SER 4400.0212
GLU 4410.0240
SER 4420.0318
THR 4430.0326
CYS 4440.0297
ASN 4450.0235
PHE 4460.0207
TYR 4470.0169
VAL 4480.0142
CYS 4490.0121
ASN 4500.0092
CYS 4510.0096
VAL 4520.0111
GLU 4530.0121
LYS 4540.0138
GLU 10.0208
VAL 20.0182
GLN 30.0192
LEU 40.0170
VAL 50.0183
GLU 60.0168
SER 70.0163
GLY 80.0145
GLY 90.0125
GLY 100.0069
LEU 110.0058
VAL 120.0071
LYS 130.0087
PRO 140.0103
GLY 150.0107
GLY 160.0102
SER 170.0104
LEU 180.0110
LYS 190.0146
LEU 200.0150
SER 210.0169
CYS 220.0177
ALA 230.0202
ALA 240.0193
SER 250.0213
GLY 260.0206
PHE 270.0188
ILE 280.0196
PHE 290.0192
SER 300.0194
ASP 310.0175
TYR 320.0154
TYR 330.0145
MET 340.0133
TYR 350.0120
TRP 360.0121
VAL 370.0105
ARG 380.0112
GLN 390.0112
THR 400.0115
PRO 410.0117
GLU 420.0112
LYS 430.0108
ARG 440.0102
LEU 450.0099
GLU 460.0090
TRP 470.0092
VAL 480.0109
ALA 490.0119
THR 500.0124
ILE 510.0148
SER 520.0158
ASP 520.0184
GLY 530.0216
ASN 540.0229
SER 550.0201
TYR 560.0170
THR 570.0151
TYR 580.0120
TYR 590.0109
VAL 600.0089
ASP 610.0079
SER 620.0084
VAL 630.0100
LYS 640.0092
GLY 650.0101
ARG 660.0108
PHE 670.0118
THR 680.0135
ILE 690.0145
SER 700.0171
ARG 710.0190
ASP 720.0221
ASN 730.0229
ALA 740.0261
LYS 750.0257
ASN 760.0222
ASN 770.0206
LEU 780.0177
TYR 790.0168
LEU 800.0143
GLN 810.0135
MET 820.0112
SER 820.0110
SER 820.0102
LEU 820.0105
LYS 830.0099
SER 840.0103
GLU 850.0104
ASP 860.0107
THR 870.0115
ALA 880.0120
ILE 890.0127
TYR 900.0122
TYR 910.0133
CYS 920.0133
ALA 930.0118
ARG 940.0122
ASP 950.0102
GLY 960.0102
PRO 970.0111
THR 980.0098
ASP 990.0075
SER 1000.0078
SER 1000.0080
GLY 1000.0085
TYR 1000.0078
GLY 1000.0080
GLY 1000.0079
PHE 1000.0094
GLY 1010.0101
TYR 1020.0123
TRP 1030.0124
GLY 1040.0145
GLN 1050.0157
GLY 1060.0132
THR 1070.0123
LEU 1080.0112
VAL 1090.0091
THR 1100.0085
VAL 1110.0084
SER 1120.0068
GLU 1130.0083
ALA 1140.0075
LYS 1150.0083
THR 1160.0095
THR 1170.0141
PRO 1180.0185
PRO 1190.0177
SER 1200.0172
VAL 1210.0172
TYR 1220.0145
PRO 1230.0107
LEU 1240.0106
ALA 1250.0095
PRO 1260.0108
GLY 1270.0180
SER 1280.0233
ALA 1290.0222
ALA 1300.0169
GLN 1330.0214
THR 1340.0210
ASN 1350.0209
SER 1360.0225
MET 1370.0165
VAL 1380.0114
THR 1390.0072
LEU 1400.0068
GLY 1410.0097
CYS 1420.0131
LEU 1430.0150
VAL 1440.0170
LYS 1450.0162
GLY 1460.0171
TYR 1470.0176
PHE 1480.0114
PRO 1490.0100
GLU 1500.0110
PRO 1510.0141
VAL 1520.0156
THR 1530.0165
VAL 1540.0165
THR 1560.0153
TRP 1570.0122
ASN 1620.0111
SER 1630.0148
GLY 1640.0167
SER 1650.0156
LEU 1660.0142
SER 1670.0175
SER 1680.0162
GLY 1690.0134
VAL 1710.0135
HIS 1720.0150
THR 1730.0167
PHE 1740.0169
PRO 1750.0183
ALA 1760.0189
VAL 1770.0196
LEU 1780.0193
GLN 1790.0197
SER 1800.0166
ASP 1830.0134
LEU 1840.0148
TYR 1850.0160
THR 1860.0185
LEU 1870.0175
SER 1880.0159
SER 1890.0143
SER 1900.0109
VAL 1910.0099
THR 1920.0107
VAL 1930.0127
PRO 1940.0173
SER 1950.0182
SER 1960.0200
PRO 1980.0149
ARG 1990.0126
PRO 2000.0131
SER 2020.0156
GLU 2030.0120
THR 2040.0074
VAL 2050.0068
THR 2060.0089
CYS 2080.0120
ASN 2090.0147
VAL 2100.0172
ALA 2110.0180
HIS 2120.0174
PRO 2130.0182
ALA 2140.0151
SER 2150.0172
SER 2160.0200
THR 2170.0199
LYS 2180.0190
VAL 2190.0178
ASP 2200.0140
LYS 2210.0123
LYS 2220.0091
ILE 2230.0084
VAL 2260.0115
PRO 2270.0147
ARG 2280.0189
ASP 2320.0252
CYS 2330.0337
SER 20.0100
VAL 30.0088
LEU 40.0076
SER 50.0079
GLN 60.0076
SER 70.0079
PRO 80.0083
ALA 90.0092
ILE 100.0096
LEU 110.0095
SER 120.0096
ALA 130.0101
SER 140.0117
PRO 150.0144
GLY 160.0158
GLU 170.0133
LYS 180.0132
VAL 190.0111
THR 200.0110
MET 210.0092
THR 220.0087
CYS 230.0080
ARG 240.0087
ALA 250.0093
ARG 260.0105
SER 270.0120
SER 290.0120
VAL 300.0105
SER 310.0108
TYR 320.0089
MET 330.0078
HIS 340.0074
TRP 350.0080
TYR 360.0083
GLN 370.0094
GLN 380.0103
LYS 390.0107
SER 400.0117
GLY 410.0134
SER 420.0117
SER 430.0116
PRO 440.0103
LYS 450.0096
PRO 460.0091
TRP 470.0088
ILE 480.0084
HIS 490.0077
ALA 500.0084
THR 510.0094
SER 520.0105
ASN 530.0099
LEU 540.0103
ALA 550.0096
SER 560.0100
GLY 570.0130
VAL 580.0127
PRO 590.0157
ALA 600.0168
ARG 610.0161
PHE 620.0132
SER 630.0126
GLY 640.0111
SER 650.0116
GLY 660.0118
SER 670.0124
GLY 680.0125
THR 690.0112
SER 700.0107
TYR 710.0098
SER 720.0098
LEU 730.0102
THR 740.0121
ILE 750.0132
SER 760.0155
ARG 770.0156
VAL 780.0136
GLU 790.0154
ALA 800.0142
GLU 810.0144
ASP 820.0123
ALA 830.0118
ALA 840.0107
THR 850.0101
TYR 860.0088
TYR 870.0081
CYS 880.0075
GLN 890.0075
GLN 900.0075
TRP 910.0081
SER 920.0085
SER 930.0093
HIS 940.0095
PRO 950.0090
PRO 960.0082
THR 970.0078
PHE 980.0084
GLY 990.0078
SER 1000.0084
GLY 1010.0091
THR 1020.0089
LYS 1030.0098
LEU 1040.0105
GLU 1050.0109
ILE 1060.0116
LYS 1070.0121
ARG 1080.0128
ALA 1090.0134
ASP 1100.0156
ALA 1110.0144
ALA 1120.0144
PRO 1130.0120
THR 1140.0099
VAL 1150.0085
SER 1160.0071
ILE 1170.0096
PHE 1180.0119
PRO 1190.0170
PRO 1200.0192
SER 1210.0171
SER 1220.0213
GLU 1230.0212
GLN 1240.0230
LEU 1250.0284
THR 1260.0310
SER 1270.0331
GLY 1280.0374
GLY 1290.0322
ALA 1300.0263
SER 1310.0211
VAL 1320.0173
VAL 1330.0138
CYS 1340.0114
PHE 1350.0109
LEU 1360.0114
ASN 1370.0128
ASN 1380.0135
PHE 1390.0140
TYR 1400.0149
PRO 1410.0150
LYS 1420.0148
ASP 1430.0168
ILE 1440.0142
ASN 1450.0138
VAL 1460.0141
LYS 1470.0152
TRP 1480.0170
LYS 1490.0199
ILE 1500.0255
ASP 1510.0285
GLY 1520.0279
SER 1530.0213
GLU 1540.0252
ARG 1550.0234
GLN 1560.0271
ASN 1570.0298
GLY 1580.0267
VAL 1590.0227
LEU 1600.0225
ASN 1610.0180
SER 1620.0184
TRP 1630.0184
THR 1640.0164
ASP 1650.0146
GLN 1660.0146
ASP 1670.0148
SER 1680.0149
LYS 1690.0160
ASP 1700.0149
SER 1710.0139
THR 1720.0143
TYR 1730.0147
SER 1740.0143
MET 1750.0146
SER 1760.0152
SER 1770.0160
THR 1780.0176
LEU 1790.0213
THR 1800.0270
LEU 1810.0319
THR 1820.0397
LYS 1830.0378
ASP 1840.0448
GLU 1850.0415
TYR 1860.0352
GLU 1870.0396
ARG 1880.0434
HIS 1890.0370
ASN 1900.0333
SER 1910.0257
TYR 1920.0206
THR 1930.0147
CYS 1940.0116
GLU 1950.0097
ALA 1960.0103
THR 1970.0119
HIS 1980.0135
LYS 1990.0161
THR 2000.0159
SER 2010.0156
THR 2020.0169
SER 2030.0119
PRO 2040.0099
ILE 2050.0100
VAL 2060.0090
LYS 2070.0106
SER 2080.0149
PHE 2090.0202
ASN 2100.0272
ARG 2110.0306
ASN 2120.0377
GLU 2130.0340
CYS 2140.0319

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.