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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 92  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0718
ILE 4210.0335
PHE 4220.0058
ILE 4230.0162
SER 4240.0125
ASN 4250.0042
ASP 4260.0104
LYS 4270.0055
GLU 4280.0113
SER 4290.0125
ILE 4300.0091
LYS 4310.0047
CYS 4320.0066
PRO 4330.0124
CYS 4340.0079
GLU 4350.0063
PRO 4360.0088
GLU 4370.0067
ARG 4380.0080
ILE 4390.0064
SER 4400.0121
GLU 4410.0245
SER 4420.0193
THR 4430.0085
CYS 4440.0156
ASN 4450.0036
PHE 4460.0009
TYR 4470.0050
VAL 4480.0066
CYS 4490.0068
ASN 4500.0062
CYS 4510.0160
VAL 4520.0277
GLU 4530.0341
LYS 4540.0477
GLU 10.0161
VAL 20.0169
GLN 30.0167
LEU 40.0159
VAL 50.0219
GLU 60.0182
SER 70.0258
GLY 80.0230
GLY 90.0133
GLY 100.0040
LEU 110.0057
VAL 120.0105
LYS 130.0184
PRO 140.0126
GLY 150.0263
GLY 160.0219
SER 170.0144
LEU 180.0099
LYS 190.0186
LEU 200.0132
SER 210.0137
CYS 220.0088
ALA 230.0097
ALA 240.0062
SER 250.0092
GLY 260.0103
PHE 270.0111
ILE 280.0125
PHE 290.0096
SER 300.0099
ASP 310.0068
TYR 320.0054
TYR 330.0052
MET 340.0042
TYR 350.0043
TRP 360.0036
VAL 370.0095
ARG 380.0091
GLN 390.0121
THR 400.0316
PRO 410.0490
GLU 420.0718
LYS 430.0345
ARG 440.0435
LEU 450.0278
GLU 460.0149
TRP 470.0089
VAL 480.0089
ALA 490.0092
THR 500.0106
ILE 510.0121
SER 520.0108
ASP 520.0100
GLY 530.0137
ASN 540.0158
SER 550.0121
TYR 560.0155
THR 570.0187
TYR 580.0111
TYR 590.0084
VAL 600.0061
ASP 610.0175
SER 620.0115
VAL 630.0099
LYS 640.0149
GLY 650.0185
ARG 660.0165
PHE 670.0075
THR 680.0110
ILE 690.0137
SER 700.0156
ARG 710.0082
ASP 720.0049
ASN 730.0244
ALA 740.0405
LYS 750.0353
ASN 760.0056
ASN 770.0077
LEU 780.0104
TYR 790.0120
LEU 800.0099
GLN 810.0118
MET 820.0100
SER 820.0164
SER 820.0202
LEU 820.0137
LYS 830.0136
SER 840.0097
GLU 850.0117
ASP 860.0087
THR 870.0189
ALA 880.0117
ILE 890.0091
TYR 900.0095
TYR 910.0114
CYS 920.0066
ALA 930.0105
ARG 940.0057
ASP 950.0055
GLY 960.0049
PRO 970.0319
THR 980.0453
ASP 990.0413
SER 1000.0091
SER 1000.0117
GLY 1000.0170
TYR 1000.0173
GLY 1000.0171
GLY 1000.0118
PHE 1000.0095
GLY 1010.0045
TYR 1020.0070
TRP 1030.0253
GLY 1040.0230
GLN 1050.0286
GLY 1060.0198
THR 1070.0165
LEU 1080.0108
VAL 1090.0034
THR 1100.0020
VAL 1110.0043
SER 1120.0108
GLU 1130.0197
ALA 1140.0064
LYS 1150.0110
THR 1160.0078
THR 1170.0066
PRO 1180.0038
PRO 1190.0011
SER 1200.0043
VAL 1210.0059
TYR 1220.0052
PRO 1230.0055
LEU 1240.0031
ALA 1250.0048
PRO 1260.0059
GLY 1270.0071
SER 1280.0134
ALA 1290.0197
ALA 1300.0136
GLN 1330.0227
THR 1340.0158
ASN 1350.0099
SER 1360.0125
MET 1370.0088
VAL 1380.0029
THR 1390.0056
LEU 1400.0049
GLY 1410.0024
CYS 1420.0033
LEU 1430.0030
VAL 1440.0045
LYS 1450.0063
GLY 1460.0044
TYR 1470.0016
PHE 1480.0049
PRO 1490.0042
GLU 1500.0022
PRO 1510.0042
VAL 1520.0012
THR 1530.0034
VAL 1540.0031
THR 1560.0023
TRP 1570.0020
ASN 1620.0041
SER 1630.0056
GLY 1640.0068
SER 1650.0061
LEU 1660.0026
SER 1670.0051
SER 1680.0092
GLY 1690.0049
VAL 1710.0038
HIS 1720.0066
THR 1730.0103
PHE 1740.0121
PRO 1750.0166
ALA 1760.0138
VAL 1770.0084
LEU 1780.0060
GLN 1790.0195
SER 1800.0097
ASP 1830.0049
LEU 1840.0039
TYR 1850.0033
THR 1860.0077
LEU 1870.0076
SER 1880.0081
SER 1890.0039
SER 1900.0035
VAL 1910.0028
THR 1920.0045
VAL 1930.0078
PRO 1940.0094
SER 1950.0082
SER 1960.0244
PRO 1980.0127
ARG 1990.0107
PRO 2000.0076
SER 2020.0142
GLU 2030.0144
THR 2040.0143
VAL 2050.0078
THR 2060.0073
CYS 2080.0039
ASN 2090.0037
VAL 2100.0029
ALA 2110.0043
HIS 2120.0050
PRO 2130.0079
ALA 2140.0105
SER 2150.0092
SER 2160.0102
THR 2170.0052
LYS 2180.0061
VAL 2190.0032
ASP 2200.0047
LYS 2210.0050
LYS 2220.0058
ILE 2230.0057
VAL 2260.0053
PRO 2270.0060
ARG 2280.0049
ASP 2320.0099
CYS 2330.0105
SER 20.0063
VAL 30.0058
LEU 40.0033
SER 50.0105
GLN 60.0098
SER 70.0128
PRO 80.0149
ALA 90.0174
ILE 100.0146
LEU 110.0132
SER 120.0114
ALA 130.0087
SER 140.0108
PRO 150.0166
GLY 160.0179
GLU 170.0104
LYS 180.0093
VAL 190.0130
THR 200.0137
MET 210.0104
THR 220.0082
CYS 230.0070
ARG 240.0088
ALA 250.0085
ARG 260.0162
SER 270.0147
SER 290.0115
VAL 300.0028
SER 310.0068
TYR 320.0138
MET 330.0142
HIS 340.0147
TRP 350.0168
TYR 360.0181
GLN 370.0178
GLN 380.0267
LYS 390.0241
SER 400.0275
GLY 410.0608
SER 420.0507
SER 430.0358
PRO 440.0335
LYS 450.0301
PRO 460.0293
TRP 470.0105
ILE 480.0129
HIS 490.0185
ALA 500.0210
THR 510.0198
SER 520.0166
ASN 530.0230
LEU 540.0149
ALA 550.0104
SER 560.0598
GLY 570.0205
VAL 580.0257
PRO 590.0303
ALA 600.0325
ARG 610.0210
PHE 620.0122
SER 630.0154
GLY 640.0157
SER 650.0131
GLY 660.0113
SER 670.0091
GLY 680.0081
THR 690.0112
SER 700.0113
TYR 710.0086
SER 720.0073
LEU 730.0068
THR 740.0140
ILE 750.0102
SER 760.0098
ARG 770.0066
VAL 780.0063
GLU 790.0166
ALA 800.0052
GLU 810.0045
ASP 820.0034
ALA 830.0089
ALA 840.0091
THR 850.0103
TYR 860.0153
TYR 870.0157
CYS 880.0132
GLN 890.0090
GLN 900.0076
TRP 910.0056
SER 920.0103
SER 930.0106
HIS 940.0133
PRO 950.0101
PRO 960.0042
THR 970.0045
PHE 980.0145
GLY 990.0224
SER 1000.0294
GLY 1010.0231
THR 1020.0155
LYS 1030.0095
LEU 1040.0072
GLU 1050.0093
ILE 1060.0095
LYS 1070.0218
ARG 1080.0219
ALA 1090.0241
ASP 1100.0120
ALA 1110.0177
ALA 1120.0227
PRO 1130.0193
THR 1140.0188
VAL 1150.0185
SER 1160.0116
ILE 1170.0074
PHE 1180.0032
PRO 1190.0045
PRO 1200.0079
SER 1210.0086
SER 1220.0142
GLU 1230.0086
GLN 1240.0067
LEU 1250.0104
THR 1260.0140
SER 1270.0095
GLY 1280.0031
GLY 1290.0039
ALA 1300.0092
SER 1310.0072
VAL 1320.0031
VAL 1330.0018
CYS 1340.0094
PHE 1350.0120
LEU 1360.0169
ASN 1370.0148
ASN 1380.0106
PHE 1390.0113
TYR 1400.0059
PRO 1410.0040
LYS 1420.0077
ASP 1430.0124
ILE 1440.0121
ASN 1450.0181
VAL 1460.0085
LYS 1470.0065
TRP 1480.0056
LYS 1490.0054
ILE 1500.0049
ASP 1510.0053
GLY 1520.0085
SER 1530.0084
GLU 1540.0133
ARG 1550.0043
GLN 1560.0091
ASN 1570.0160
GLY 1580.0166
VAL 1590.0113
LEU 1600.0095
ASN 1610.0175
SER 1620.0174
TRP 1630.0210
THR 1640.0205
ASP 1650.0200
GLN 1660.0133
ASP 1670.0139
SER 1680.0117
LYS 1690.0123
ASP 1700.0096
SER 1710.0071
THR 1720.0065
TYR 1730.0091
SER 1740.0125
MET 1750.0167
SER 1760.0143
SER 1770.0103
THR 1780.0060
LEU 1790.0087
THR 1800.0101
LEU 1810.0112
THR 1820.0075
LYS 1830.0066
ASP 1840.0032
GLU 1850.0036
TYR 1860.0059
GLU 1870.0053
ARG 1880.0018
HIS 1890.0028
ASN 1900.0051
SER 1910.0039
TYR 1920.0036
THR 1930.0037
CYS 1940.0095
GLU 1950.0117
ALA 1960.0163
THR 1970.0203
HIS 1980.0150
LYS 1990.0100
THR 2000.0170
SER 2010.0182
THR 2020.0180
SER 2030.0399
PRO 2040.0290
ILE 2050.0080
VAL 2060.0066
LYS 2070.0053
SER 2080.0040
PHE 2090.0047
ASN 2100.0047
ARG 2110.0053
ASN 2120.0064
GLU 2130.0062
CYS 2140.0073

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.