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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 93  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0513
ILE 4210.0039
PHE 4220.0023
ILE 4230.0009
SER 4240.0037
ASN 4250.0071
ASP 4260.0122
LYS 4270.0083
GLU 4280.0070
SER 4290.0070
ILE 4300.0029
LYS 4310.0023
CYS 4320.0026
PRO 4330.0015
CYS 4340.0017
GLU 4350.0020
PRO 4360.0043
GLU 4370.0032
ARG 4380.0049
ILE 4390.0048
SER 4400.0040
GLU 4410.0062
SER 4420.0078
THR 4430.0014
CYS 4440.0068
ASN 4450.0054
PHE 4460.0044
TYR 4470.0046
VAL 4480.0034
CYS 4490.0031
ASN 4500.0037
CYS 4510.0022
VAL 4520.0035
GLU 4530.0042
LYS 4540.0030
GLU 10.0199
VAL 20.0033
GLN 30.0149
LEU 40.0092
VAL 50.0125
GLU 60.0098
SER 70.0069
GLY 80.0050
GLY 90.0050
GLY 100.0069
LEU 110.0070
VAL 120.0051
LYS 130.0055
PRO 140.0123
GLY 150.0106
GLY 160.0030
SER 170.0025
LEU 180.0047
LYS 190.0048
LEU 200.0032
SER 210.0037
CYS 220.0085
ALA 230.0118
ALA 240.0117
SER 250.0209
GLY 260.0187
PHE 270.0197
ILE 280.0145
PHE 290.0126
SER 300.0108
ASP 310.0107
TYR 320.0083
TYR 330.0063
MET 340.0034
TYR 350.0041
TRP 360.0050
VAL 370.0042
ARG 380.0045
GLN 390.0064
THR 400.0035
PRO 410.0058
GLU 420.0062
LYS 430.0047
ARG 440.0060
LEU 450.0070
GLU 460.0032
TRP 470.0015
VAL 480.0011
ALA 490.0036
THR 500.0037
ILE 510.0042
SER 520.0050
ASP 520.0056
GLY 530.0043
ASN 540.0029
SER 550.0043
TYR 560.0035
THR 570.0045
TYR 580.0018
TYR 590.0007
VAL 600.0014
ASP 610.0117
SER 620.0069
VAL 630.0023
LYS 640.0063
GLY 650.0096
ARG 660.0086
PHE 670.0066
THR 680.0070
ILE 690.0075
SER 700.0117
ARG 710.0066
ASP 720.0080
ASN 730.0114
ALA 740.0323
LYS 750.0183
ASN 760.0061
ASN 770.0072
LEU 780.0071
TYR 790.0088
LEU 800.0091
GLN 810.0094
MET 820.0078
SER 820.0056
SER 820.0047
LEU 820.0066
LYS 830.0080
SER 840.0099
GLU 850.0074
ASP 860.0067
THR 870.0053
ALA 880.0053
ILE 890.0067
TYR 900.0050
TYR 910.0070
CYS 920.0044
ALA 930.0032
ARG 940.0041
ASP 950.0037
GLY 960.0049
PRO 970.0227
THR 980.0339
ASP 990.0321
SER 1000.0072
SER 1000.0064
GLY 1000.0065
TYR 1000.0045
GLY 1000.0038
GLY 1000.0027
PHE 1000.0028
GLY 1010.0047
TYR 1020.0051
TRP 1030.0070
GLY 1040.0089
GLN 1050.0125
GLY 1060.0105
THR 1070.0081
LEU 1080.0052
VAL 1090.0064
THR 1100.0069
VAL 1110.0060
SER 1120.0193
GLU 1130.0126
ALA 1140.0164
LYS 1150.0197
THR 1160.0119
THR 1170.0114
PRO 1180.0063
PRO 1190.0023
SER 1200.0074
VAL 1210.0118
TYR 1220.0077
PRO 1230.0046
LEU 1240.0134
ALA 1250.0274
PRO 1260.0388
GLY 1270.0453
SER 1280.0399
ALA 1290.0513
ALA 1300.0408
GLN 1330.0330
THR 1340.0346
ASN 1350.0463
SER 1360.0441
MET 1370.0341
VAL 1380.0278
THR 1390.0199
LEU 1400.0189
GLY 1410.0170
CYS 1420.0093
LEU 1430.0109
VAL 1440.0108
LYS 1450.0097
GLY 1460.0082
TYR 1470.0101
PHE 1480.0113
PRO 1490.0084
GLU 1500.0051
PRO 1510.0038
VAL 1520.0039
THR 1530.0031
VAL 1540.0097
THR 1560.0147
TRP 1570.0115
ASN 1620.0180
SER 1630.0175
GLY 1640.0210
SER 1650.0265
LEU 1660.0218
SER 1670.0178
SER 1680.0421
GLY 1690.0251
VAL 1710.0155
HIS 1720.0116
THR 1730.0103
PHE 1740.0067
PRO 1750.0061
ALA 1760.0074
VAL 1770.0133
LEU 1780.0151
GLN 1790.0120
SER 1800.0181
ASP 1830.0235
LEU 1840.0171
TYR 1850.0086
THR 1860.0085
LEU 1870.0089
SER 1880.0103
SER 1890.0173
SER 1900.0171
VAL 1910.0162
THR 1920.0317
VAL 1930.0372
PRO 1940.0364
SER 1950.0459
SER 1960.0504
PRO 1980.0260
ARG 1990.0227
PRO 2000.0172
SER 2020.0313
GLU 2030.0471
THR 2040.0326
VAL 2050.0153
THR 2060.0109
CYS 2080.0141
ASN 2090.0140
VAL 2100.0139
ALA 2110.0143
HIS 2120.0114
PRO 2130.0144
ALA 2140.0153
SER 2150.0191
SER 2160.0265
THR 2170.0258
LYS 2180.0257
VAL 2190.0282
ASP 2200.0292
LYS 2210.0185
LYS 2220.0247
ILE 2230.0150
VAL 2260.0382
PRO 2270.0446
ARG 2280.0407
ASP 2320.0353
CYS 2330.0288
SER 20.0108
VAL 30.0086
LEU 40.0059
SER 50.0076
GLN 60.0078
SER 70.0132
PRO 80.0131
ALA 90.0124
ILE 100.0114
LEU 110.0130
SER 120.0082
ALA 130.0059
SER 140.0116
PRO 150.0061
GLY 160.0051
GLU 170.0094
LYS 180.0100
VAL 190.0108
THR 200.0096
MET 210.0091
THR 220.0078
CYS 230.0065
ARG 240.0116
ALA 250.0177
ARG 260.0127
SER 270.0291
SER 290.0174
VAL 300.0143
SER 310.0140
TYR 320.0073
MET 330.0047
HIS 340.0037
TRP 350.0034
TYR 360.0031
GLN 370.0027
GLN 380.0093
LYS 390.0098
SER 400.0096
GLY 410.0226
SER 420.0164
SER 430.0110
PRO 440.0083
LYS 450.0064
PRO 460.0064
TRP 470.0046
ILE 480.0046
HIS 490.0041
ALA 500.0077
THR 510.0081
SER 520.0091
ASN 530.0070
LEU 540.0087
ALA 550.0099
SER 560.0167
GLY 570.0243
VAL 580.0194
PRO 590.0123
ALA 600.0139
ARG 610.0123
PHE 620.0096
SER 630.0083
GLY 640.0087
SER 650.0128
GLY 660.0104
SER 670.0094
GLY 680.0138
THR 690.0168
SER 700.0118
TYR 710.0062
SER 720.0075
LEU 730.0077
THR 740.0102
ILE 750.0083
SER 760.0070
ARG 770.0055
VAL 780.0036
GLU 790.0082
ALA 800.0053
GLU 810.0061
ASP 820.0064
ALA 830.0067
ALA 840.0066
THR 850.0073
TYR 860.0041
TYR 870.0039
CYS 880.0021
GLN 890.0020
GLN 900.0030
TRP 910.0034
SER 920.0073
SER 930.0063
HIS 940.0046
PRO 950.0053
PRO 960.0044
THR 970.0038
PHE 980.0025
GLY 990.0034
SER 1000.0037
GLY 1010.0080
THR 1020.0093
LYS 1030.0085
LEU 1040.0056
GLU 1050.0023
ILE 1060.0024
LYS 1070.0098
ARG 1080.0162
ALA 1090.0228
ASP 1100.0097
ALA 1110.0064
ALA 1120.0058
PRO 1130.0080
THR 1140.0068
VAL 1150.0048
SER 1160.0076
ILE 1170.0098
PHE 1180.0165
PRO 1190.0167
PRO 1200.0136
SER 1210.0080
SER 1220.0198
GLU 1230.0184
GLN 1240.0188
LEU 1250.0232
THR 1260.0324
SER 1270.0257
GLY 1280.0147
GLY 1290.0159
ALA 1300.0152
SER 1310.0097
VAL 1320.0100
VAL 1330.0104
CYS 1340.0064
PHE 1350.0069
LEU 1360.0074
ASN 1370.0068
ASN 1380.0065
PHE 1390.0092
TYR 1400.0061
PRO 1410.0056
LYS 1420.0079
ASP 1430.0074
ILE 1440.0072
ASN 1450.0103
VAL 1460.0031
LYS 1470.0017
TRP 1480.0036
LYS 1490.0161
ILE 1500.0213
ASP 1510.0216
GLY 1520.0266
SER 1530.0471
GLU 1540.0340
ARG 1550.0151
GLN 1560.0086
ASN 1570.0253
GLY 1580.0053
VAL 1590.0051
LEU 1600.0097
ASN 1610.0087
SER 1620.0087
TRP 1630.0093
THR 1640.0051
ASP 1650.0049
GLN 1660.0059
ASP 1670.0168
SER 1680.0114
LYS 1690.0208
ASP 1700.0115
SER 1710.0089
THR 1720.0103
TYR 1730.0064
SER 1740.0065
MET 1750.0081
SER 1760.0090
SER 1770.0079
THR 1780.0074
LEU 1790.0088
THR 1800.0087
LEU 1810.0080
THR 1820.0278
LYS 1830.0199
ASP 1840.0341
GLU 1850.0113
TYR 1860.0115
GLU 1870.0168
ARG 1880.0261
HIS 1890.0217
ASN 1900.0136
SER 1910.0161
TYR 1920.0170
THR 1930.0172
CYS 1940.0040
GLU 1950.0047
ALA 1960.0048
THR 1970.0053
HIS 1980.0015
LYS 1990.0052
THR 2000.0080
SER 2010.0061
THR 2020.0087
SER 2030.0157
PRO 2040.0097
ILE 2050.0064
VAL 2060.0123
LYS 2070.0106
SER 2080.0153
PHE 2090.0111
ASN 2100.0058
ARG 2110.0069
ASN 2120.0372
GLU 2130.0286
CYS 2140.0224

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.