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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 95  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0515
ILE 4210.0316
PHE 4220.0137
ILE 4230.0177
SER 4240.0068
ASN 4250.0147
ASP 4260.0167
LYS 4270.0077
GLU 4280.0099
SER 4290.0100
ILE 4300.0087
LYS 4310.0067
CYS 4320.0076
PRO 4330.0068
CYS 4340.0057
GLU 4350.0040
PRO 4360.0076
GLU 4370.0057
ARG 4380.0053
ILE 4390.0174
SER 4400.0166
GLU 4410.0151
SER 4420.0235
THR 4430.0270
CYS 4440.0306
ASN 4450.0147
PHE 4460.0115
TYR 4470.0116
VAL 4480.0068
CYS 4490.0090
ASN 4500.0091
CYS 4510.0118
VAL 4520.0121
GLU 4530.0130
LYS 4540.0353
GLU 10.0232
VAL 20.0228
GLN 30.0097
LEU 40.0088
VAL 50.0087
GLU 60.0091
SER 70.0087
GLY 80.0095
GLY 90.0097
GLY 100.0172
LEU 110.0161
VAL 120.0162
LYS 130.0119
PRO 140.0118
GLY 150.0110
GLY 160.0048
SER 170.0090
LEU 180.0080
LYS 190.0063
LEU 200.0054
SER 210.0066
CYS 220.0062
ALA 230.0072
ALA 240.0092
SER 250.0162
GLY 260.0260
PHE 270.0318
ILE 280.0229
PHE 290.0168
SER 300.0115
ASP 310.0110
TYR 320.0111
TYR 330.0102
MET 340.0046
TYR 350.0033
TRP 360.0033
VAL 370.0206
ARG 380.0208
GLN 390.0209
THR 400.0288
PRO 410.0431
GLU 420.0447
LYS 430.0274
ARG 440.0292
LEU 450.0299
GLU 460.0176
TRP 470.0142
VAL 480.0112
ALA 490.0108
THR 500.0120
ILE 510.0149
SER 520.0151
ASP 520.0125
GLY 530.0098
ASN 540.0121
SER 550.0191
TYR 560.0182
THR 570.0204
TYR 580.0127
TYR 590.0091
VAL 600.0095
ASP 610.0307
SER 620.0294
VAL 630.0094
LYS 640.0114
GLY 650.0171
ARG 660.0182
PHE 670.0133
THR 680.0136
ILE 690.0143
SER 700.0164
ARG 710.0160
ASP 720.0181
ASN 730.0229
ALA 740.0496
LYS 750.0343
ASN 760.0121
ASN 770.0116
LEU 780.0113
TYR 790.0055
LEU 800.0069
GLN 810.0057
MET 820.0147
SER 820.0154
SER 820.0161
LEU 820.0136
LYS 830.0206
SER 840.0251
GLU 850.0327
ASP 860.0172
THR 870.0130
ALA 880.0122
ILE 890.0109
TYR 900.0132
TYR 910.0142
CYS 920.0110
ALA 930.0086
ARG 940.0063
ASP 950.0089
GLY 960.0135
PRO 970.0204
THR 980.0313
ASP 990.0348
SER 1000.0145
SER 1000.0112
GLY 1000.0087
TYR 1000.0085
GLY 1000.0075
GLY 1000.0077
PHE 1000.0074
GLY 1010.0098
TYR 1020.0110
TRP 1030.0178
GLY 1040.0170
GLN 1050.0153
GLY 1060.0139
THR 1070.0086
LEU 1080.0061
VAL 1090.0119
THR 1100.0166
VAL 1110.0154
SER 1120.0168
GLU 1130.0136
ALA 1140.0143
LYS 1150.0144
THR 1160.0067
THR 1170.0081
PRO 1180.0043
PRO 1190.0037
SER 1200.0078
VAL 1210.0103
TYR 1220.0097
PRO 1230.0077
LEU 1240.0050
ALA 1250.0035
PRO 1260.0063
GLY 1270.0056
SER 1280.0282
ALA 1290.0515
ALA 1300.0272
GLN 1330.0400
THR 1340.0116
ASN 1350.0397
SER 1360.0264
MET 1370.0115
VAL 1380.0154
THR 1390.0088
LEU 1400.0067
GLY 1410.0070
CYS 1420.0079
LEU 1430.0101
VAL 1440.0098
LYS 1450.0109
GLY 1460.0077
TYR 1470.0064
PHE 1480.0113
PRO 1490.0147
GLU 1500.0157
PRO 1510.0071
VAL 1520.0048
THR 1530.0075
VAL 1540.0075
THR 1560.0054
TRP 1570.0042
ASN 1620.0126
SER 1630.0126
GLY 1640.0088
SER 1650.0261
LEU 1660.0184
SER 1670.0210
SER 1680.0223
GLY 1690.0120
VAL 1710.0102
HIS 1720.0068
THR 1730.0135
PHE 1740.0138
PRO 1750.0179
ALA 1760.0189
VAL 1770.0262
LEU 1780.0139
GLN 1790.0109
SER 1800.0270
ASP 1830.0400
LEU 1840.0241
TYR 1850.0043
THR 1860.0138
LEU 1870.0142
SER 1880.0148
SER 1890.0112
SER 1900.0080
VAL 1910.0085
THR 1920.0061
VAL 1930.0073
PRO 1940.0080
SER 1950.0184
SER 1960.0165
PRO 1980.0092
ARG 1990.0095
PRO 2000.0110
SER 2020.0113
GLU 2030.0156
THR 2040.0185
VAL 2050.0070
THR 2060.0067
CYS 2080.0036
ASN 2090.0043
VAL 2100.0024
ALA 2110.0014
HIS 2120.0027
PRO 2130.0080
ALA 2140.0094
SER 2150.0081
SER 2160.0143
THR 2170.0056
LYS 2180.0123
VAL 2190.0190
ASP 2200.0125
LYS 2210.0117
LYS 2220.0119
ILE 2230.0073
VAL 2260.0087
PRO 2270.0136
ARG 2280.0140
ASP 2320.0106
CYS 2330.0117
SER 20.0084
VAL 30.0105
LEU 40.0120
SER 50.0184
GLN 60.0160
SER 70.0174
PRO 80.0191
ALA 90.0236
ILE 100.0163
LEU 110.0096
SER 120.0136
ALA 130.0189
SER 140.0262
PRO 150.0242
GLY 160.0214
GLU 170.0162
LYS 180.0134
VAL 190.0145
THR 200.0037
MET 210.0066
THR 220.0098
CYS 230.0142
ARG 240.0199
ALA 250.0249
ARG 260.0203
SER 270.0284
SER 290.0217
VAL 300.0205
SER 310.0191
TYR 320.0127
MET 330.0115
HIS 340.0109
TRP 350.0082
TYR 360.0089
GLN 370.0089
GLN 380.0053
LYS 390.0064
SER 400.0083
GLY 410.0231
SER 420.0182
SER 430.0191
PRO 440.0162
LYS 450.0184
PRO 460.0194
TRP 470.0169
ILE 480.0169
HIS 490.0170
ALA 500.0152
THR 510.0124
SER 520.0128
ASN 530.0195
LEU 540.0182
ALA 550.0184
SER 560.0290
GLY 570.0287
VAL 580.0234
PRO 590.0200
ALA 600.0140
ARG 610.0060
PHE 620.0070
SER 630.0054
GLY 640.0057
SER 650.0058
GLY 660.0051
SER 670.0053
GLY 680.0081
THR 690.0192
SER 700.0170
TYR 710.0047
SER 720.0042
LEU 730.0028
THR 740.0113
ILE 750.0095
SER 760.0115
ARG 770.0247
VAL 780.0163
GLU 790.0140
ALA 800.0075
GLU 810.0080
ASP 820.0081
ALA 830.0050
ALA 840.0054
THR 850.0063
TYR 860.0030
TYR 870.0049
CYS 880.0077
GLN 890.0054
GLN 900.0074
TRP 910.0087
SER 920.0120
SER 930.0106
HIS 940.0095
PRO 950.0096
PRO 960.0078
THR 970.0066
PHE 980.0064
GLY 990.0088
SER 1000.0098
GLY 1010.0154
THR 1020.0124
LYS 1030.0132
LEU 1040.0132
GLU 1050.0149
ILE 1060.0174
LYS 1070.0206
ARG 1080.0197
ALA 1090.0171
ASP 1100.0071
ALA 1110.0052
ALA 1120.0053
PRO 1130.0075
THR 1140.0062
VAL 1150.0060
SER 1160.0053
ILE 1170.0054
PHE 1180.0062
PRO 1190.0062
PRO 1200.0051
SER 1210.0042
SER 1220.0055
GLU 1230.0072
GLN 1240.0076
LEU 1250.0099
THR 1260.0123
SER 1270.0188
GLY 1280.0130
GLY 1290.0085
ALA 1300.0046
SER 1310.0066
VAL 1320.0070
VAL 1330.0077
CYS 1340.0063
PHE 1350.0054
LEU 1360.0029
ASN 1370.0021
ASN 1380.0036
PHE 1390.0046
TYR 1400.0053
PRO 1410.0038
LYS 1420.0092
ASP 1430.0152
ILE 1440.0117
ASN 1450.0116
VAL 1460.0036
LYS 1470.0058
TRP 1480.0088
LYS 1490.0082
ILE 1500.0073
ASP 1510.0076
GLY 1520.0336
SER 1530.0257
GLU 1540.0251
ARG 1550.0253
GLN 1560.0213
ASN 1570.0206
GLY 1580.0178
VAL 1590.0171
LEU 1600.0168
ASN 1610.0143
SER 1620.0136
TRP 1630.0120
THR 1640.0073
ASP 1650.0069
GLN 1660.0089
ASP 1670.0157
SER 1680.0084
LYS 1690.0104
ASP 1700.0134
SER 1710.0143
THR 1720.0124
TYR 1730.0046
SER 1740.0028
MET 1750.0035
SER 1760.0111
SER 1770.0113
THR 1780.0119
LEU 1790.0104
THR 1800.0080
LEU 1810.0061
THR 1820.0133
LYS 1830.0110
ASP 1840.0131
GLU 1850.0072
TYR 1860.0045
GLU 1870.0078
ARG 1880.0070
HIS 1890.0074
ASN 1900.0094
SER 1910.0077
TYR 1920.0081
THR 1930.0085
CYS 1940.0039
GLU 1950.0035
ALA 1960.0097
THR 1970.0128
HIS 1980.0118
LYS 1990.0145
THR 2000.0139
SER 2010.0161
THR 2020.0145
SER 2030.0173
PRO 2040.0155
ILE 2050.0174
VAL 2060.0065
LYS 2070.0047
SER 2080.0080
PHE 2090.0132
ASN 2100.0132
ARG 2110.0116
ASN 2120.0213
GLU 2130.0272
CYS 2140.0412

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.