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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 96  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0500
ILE 4210.0123
PHE 4220.0101
ILE 4230.0093
SER 4240.0054
ASN 4250.0089
ASP 4260.0156
LYS 4270.0098
GLU 4280.0168
SER 4290.0204
ILE 4300.0142
LYS 4310.0138
CYS 4320.0089
PRO 4330.0051
CYS 4340.0050
GLU 4350.0043
PRO 4360.0053
GLU 4370.0055
ARG 4380.0033
ILE 4390.0095
SER 4400.0062
GLU 4410.0138
SER 4420.0124
THR 4430.0165
CYS 4440.0143
ASN 4450.0078
PHE 4460.0078
TYR 4470.0069
VAL 4480.0064
CYS 4490.0055
ASN 4500.0063
CYS 4510.0048
VAL 4520.0070
GLU 4530.0066
LYS 4540.0072
GLU 10.0332
VAL 20.0193
GLN 30.0074
LEU 40.0113
VAL 50.0096
GLU 60.0094
SER 70.0109
GLY 80.0123
GLY 90.0119
GLY 100.0209
LEU 110.0193
VAL 120.0187
LYS 130.0130
PRO 140.0261
GLY 150.0250
GLY 160.0157
SER 170.0157
LEU 180.0148
LYS 190.0102
LEU 200.0108
SER 210.0110
CYS 220.0097
ALA 230.0108
ALA 240.0115
SER 250.0200
GLY 260.0204
PHE 270.0203
ILE 280.0132
PHE 290.0124
SER 300.0096
ASP 310.0084
TYR 320.0077
TYR 330.0055
MET 340.0037
TYR 350.0041
TRP 360.0057
VAL 370.0180
ARG 380.0195
GLN 390.0191
THR 400.0306
PRO 410.0368
GLU 420.0237
LYS 430.0141
ARG 440.0276
LEU 450.0282
GLU 460.0169
TRP 470.0125
VAL 480.0109
ALA 490.0046
THR 500.0064
ILE 510.0078
SER 520.0125
ASP 520.0053
GLY 530.0085
ASN 540.0152
SER 550.0113
TYR 560.0127
THR 570.0130
TYR 580.0103
TYR 590.0074
VAL 600.0059
ASP 610.0163
SER 620.0179
VAL 630.0109
LYS 640.0125
GLY 650.0129
ARG 660.0171
PHE 670.0127
THR 680.0094
ILE 690.0096
SER 700.0165
ARG 710.0150
ASP 720.0151
ASN 730.0236
ALA 740.0291
LYS 750.0192
ASN 760.0178
ASN 770.0144
LEU 780.0124
TYR 790.0127
LEU 800.0111
GLN 810.0079
MET 820.0182
SER 820.0189
SER 820.0199
LEU 820.0184
LYS 830.0214
SER 840.0230
GLU 850.0190
ASP 860.0135
THR 870.0123
ALA 880.0098
ILE 890.0101
TYR 900.0098
TYR 910.0174
CYS 920.0135
ALA 930.0120
ARG 940.0070
ASP 950.0069
GLY 960.0087
PRO 970.0152
THR 980.0172
ASP 990.0194
SER 1000.0097
SER 1000.0076
GLY 1000.0064
TYR 1000.0071
GLY 1000.0084
GLY 1000.0097
PHE 1000.0110
GLY 1010.0108
TYR 1020.0118
TRP 1030.0215
GLY 1040.0203
GLN 1050.0186
GLY 1060.0139
THR 1070.0068
LEU 1080.0031
VAL 1090.0169
THR 1100.0194
VAL 1110.0170
SER 1120.0290
GLU 1130.0212
ALA 1140.0049
LYS 1150.0174
THR 1160.0158
THR 1170.0099
PRO 1180.0027
PRO 1190.0065
SER 1200.0088
VAL 1210.0106
TYR 1220.0113
PRO 1230.0093
LEU 1240.0044
ALA 1250.0022
PRO 1260.0031
GLY 1270.0026
SER 1280.0200
ALA 1290.0363
ALA 1300.0161
GLN 1330.0270
THR 1340.0050
ASN 1350.0283
SER 1360.0230
MET 1370.0087
VAL 1380.0088
THR 1390.0085
LEU 1400.0073
GLY 1410.0076
CYS 1420.0036
LEU 1430.0058
VAL 1440.0044
LYS 1450.0068
GLY 1460.0035
TYR 1470.0023
PHE 1480.0059
PRO 1490.0071
GLU 1500.0075
PRO 1510.0130
VAL 1520.0067
THR 1530.0052
VAL 1540.0085
THR 1560.0063
TRP 1570.0067
ASN 1620.0100
SER 1630.0071
GLY 1640.0097
SER 1650.0299
LEU 1660.0188
SER 1670.0193
SER 1680.0243
GLY 1690.0111
VAL 1710.0080
HIS 1720.0082
THR 1730.0142
PHE 1740.0165
PRO 1750.0175
ALA 1760.0123
VAL 1770.0159
LEU 1780.0127
GLN 1790.0060
SER 1800.0071
ASP 1830.0167
LEU 1840.0089
TYR 1850.0065
THR 1860.0075
LEU 1870.0090
SER 1880.0104
SER 1890.0118
SER 1900.0101
VAL 1910.0096
THR 1920.0080
VAL 1930.0084
PRO 1940.0078
SER 1950.0139
SER 1960.0067
PRO 1980.0043
ARG 1990.0071
PRO 2000.0081
SER 2020.0103
GLU 2030.0093
THR 2040.0147
VAL 2050.0064
THR 2060.0037
CYS 2080.0038
ASN 2090.0048
VAL 2100.0025
ALA 2110.0043
HIS 2120.0083
PRO 2130.0203
ALA 2140.0218
SER 2150.0162
SER 2160.0245
THR 2170.0131
LYS 2180.0132
VAL 2190.0222
ASP 2200.0139
LYS 2210.0132
LYS 2220.0135
ILE 2230.0082
VAL 2260.0105
PRO 2270.0141
ARG 2280.0149
ASP 2320.0142
CYS 2330.0167
SER 20.0132
VAL 30.0108
LEU 40.0110
SER 50.0120
GLN 60.0101
SER 70.0142
PRO 80.0423
ALA 90.0500
ILE 100.0479
LEU 110.0182
SER 120.0050
ALA 130.0138
SER 140.0263
PRO 150.0219
GLY 160.0219
GLU 170.0274
LYS 180.0236
VAL 190.0234
THR 200.0085
MET 210.0062
THR 220.0063
CYS 230.0065
ARG 240.0140
ALA 250.0202
ARG 260.0223
SER 270.0471
SER 290.0345
VAL 300.0235
SER 310.0194
TYR 320.0046
MET 330.0020
HIS 340.0030
TRP 350.0040
TYR 360.0058
GLN 370.0070
GLN 380.0090
LYS 390.0187
SER 400.0252
GLY 410.0413
SER 420.0370
SER 430.0268
PRO 440.0173
LYS 450.0179
PRO 460.0142
TRP 470.0085
ILE 480.0094
HIS 490.0105
ALA 500.0092
THR 510.0092
SER 520.0138
ASN 530.0160
LEU 540.0148
ALA 550.0141
SER 560.0272
GLY 570.0137
VAL 580.0184
PRO 590.0163
ALA 600.0140
ARG 610.0050
PHE 620.0075
SER 630.0095
GLY 640.0139
SER 650.0137
GLY 660.0076
SER 670.0184
GLY 680.0295
THR 690.0310
SER 700.0231
TYR 710.0026
SER 720.0038
LEU 730.0077
THR 740.0143
ILE 750.0122
SER 760.0147
ARG 770.0217
VAL 780.0202
GLU 790.0145
ALA 800.0151
GLU 810.0129
ASP 820.0107
ALA 830.0085
ALA 840.0132
THR 850.0177
TYR 860.0063
TYR 870.0046
CYS 880.0036
GLN 890.0029
GLN 900.0026
TRP 910.0023
SER 920.0098
SER 930.0070
HIS 940.0038
PRO 950.0019
PRO 960.0008
THR 970.0015
PHE 980.0059
GLY 990.0078
SER 1000.0088
GLY 1010.0199
THR 1020.0214
LYS 1030.0291
LEU 1040.0127
GLU 1050.0073
ILE 1060.0113
LYS 1070.0152
ARG 1080.0147
ALA 1090.0185
ASP 1100.0130
ALA 1110.0136
ALA 1120.0161
PRO 1130.0050
THR 1140.0046
VAL 1150.0073
SER 1160.0098
ILE 1170.0085
PHE 1180.0073
PRO 1190.0131
PRO 1200.0139
SER 1210.0117
SER 1220.0152
GLU 1230.0132
GLN 1240.0128
LEU 1250.0157
THR 1260.0159
SER 1270.0185
GLY 1280.0102
GLY 1290.0098
ALA 1300.0113
SER 1310.0089
VAL 1320.0074
VAL 1330.0072
CYS 1340.0097
PHE 1350.0078
LEU 1360.0060
ASN 1370.0062
ASN 1380.0060
PHE 1390.0074
TYR 1400.0096
PRO 1410.0164
LYS 1420.0190
ASP 1430.0217
ILE 1440.0191
ASN 1450.0193
VAL 1460.0069
LYS 1470.0096
TRP 1480.0117
LYS 1490.0066
ILE 1500.0068
ASP 1510.0086
GLY 1520.0333
SER 1530.0187
GLU 1540.0223
ARG 1550.0225
GLN 1560.0167
ASN 1570.0121
GLY 1580.0095
VAL 1590.0128
LEU 1600.0152
ASN 1610.0217
SER 1620.0200
TRP 1630.0184
THR 1640.0168
ASP 1650.0140
GLN 1660.0094
ASP 1670.0172
SER 1680.0267
LYS 1690.0240
ASP 1700.0218
SER 1710.0210
THR 1720.0151
TYR 1730.0083
SER 1740.0068
MET 1750.0123
SER 1760.0152
SER 1770.0131
THR 1780.0110
LEU 1790.0105
THR 1800.0105
LEU 1810.0111
THR 1820.0213
LYS 1830.0090
ASP 1840.0193
GLU 1850.0071
TYR 1860.0079
GLU 1870.0113
ARG 1880.0031
HIS 1890.0086
ASN 1900.0133
SER 1910.0099
TYR 1920.0095
THR 1930.0085
CYS 1940.0056
GLU 1950.0068
ALA 1960.0128
THR 1970.0100
HIS 1980.0162
LYS 1990.0281
THR 2000.0254
SER 2010.0202
THR 2020.0341
SER 2030.0371
PRO 2040.0241
ILE 2050.0353
VAL 2060.0161
LYS 2070.0147
SER 2080.0093
PHE 2090.0135
ASN 2100.0141
ARG 2110.0167
ASN 2120.0273
GLU 2130.0271
CYS 2140.0328

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.