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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 97  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0596
ILE 4210.0513
PHE 4220.0304
ILE 4230.0406
SER 4240.0171
ASN 4250.0198
ASP 4260.0221
LYS 4270.0147
GLU 4280.0178
SER 4290.0267
ILE 4300.0147
LYS 4310.0210
CYS 4320.0144
PRO 4330.0084
CYS 4340.0081
GLU 4350.0069
PRO 4360.0067
GLU 4370.0075
ARG 4380.0110
ILE 4390.0094
SER 4400.0092
GLU 4410.0203
SER 4420.0094
THR 4430.0200
CYS 4440.0080
ASN 4450.0102
PHE 4460.0091
TYR 4470.0025
VAL 4480.0070
CYS 4490.0038
ASN 4500.0052
CYS 4510.0034
VAL 4520.0053
GLU 4530.0044
LYS 4540.0298
GLU 10.0060
VAL 20.0041
GLN 30.0050
LEU 40.0055
VAL 50.0062
GLU 60.0075
SER 70.0120
GLY 80.0134
GLY 90.0131
GLY 100.0168
LEU 110.0166
VAL 120.0174
LYS 130.0077
PRO 140.0214
GLY 150.0239
GLY 160.0170
SER 170.0145
LEU 180.0134
LYS 190.0069
LEU 200.0076
SER 210.0088
CYS 220.0106
ALA 230.0095
ALA 240.0080
SER 250.0052
GLY 260.0052
PHE 270.0066
ILE 280.0073
PHE 290.0072
SER 300.0096
ASP 310.0106
TYR 320.0077
TYR 330.0082
MET 340.0071
TYR 350.0071
TRP 360.0070
VAL 370.0050
ARG 380.0071
GLN 390.0066
THR 400.0165
PRO 410.0196
GLU 420.0314
LYS 430.0162
ARG 440.0150
LEU 450.0072
GLU 460.0091
TRP 470.0077
VAL 480.0117
ALA 490.0139
THR 500.0120
ILE 510.0154
SER 520.0141
ASP 520.0194
GLY 530.0409
ASN 540.0596
SER 550.0446
TYR 560.0270
THR 570.0172
TYR 580.0066
TYR 590.0112
VAL 600.0185
ASP 610.0263
SER 620.0269
VAL 630.0166
LYS 640.0094
GLY 650.0039
ARG 660.0049
PHE 670.0091
THR 680.0084
ILE 690.0102
SER 700.0145
ARG 710.0110
ASP 720.0039
ASN 730.0114
ALA 740.0201
LYS 750.0166
ASN 760.0032
ASN 770.0063
LEU 780.0101
TYR 790.0082
LEU 800.0055
GLN 810.0033
MET 820.0092
SER 820.0101
SER 820.0092
LEU 820.0077
LYS 830.0064
SER 840.0075
GLU 850.0058
ASP 860.0060
THR 870.0046
ALA 880.0049
ILE 890.0034
TYR 900.0032
TYR 910.0041
CYS 920.0036
ALA 930.0039
ARG 940.0021
ASP 950.0035
GLY 960.0071
PRO 970.0389
THR 980.0529
ASP 990.0389
SER 1000.0049
SER 1000.0057
GLY 1000.0083
TYR 1000.0074
GLY 1000.0069
GLY 1000.0035
PHE 1000.0030
GLY 1010.0044
TYR 1020.0076
TRP 1030.0057
GLY 1040.0064
GLN 1050.0076
GLY 1060.0061
THR 1070.0069
LEU 1080.0083
VAL 1090.0140
THR 1100.0161
VAL 1110.0164
SER 1120.0231
GLU 1130.0225
ALA 1140.0123
LYS 1150.0207
THR 1160.0124
THR 1170.0132
PRO 1180.0101
PRO 1190.0104
SER 1200.0113
VAL 1210.0098
TYR 1220.0091
PRO 1230.0085
LEU 1240.0053
ALA 1250.0069
PRO 1260.0120
GLY 1270.0121
SER 1280.0036
ALA 1290.0100
ALA 1300.0219
GLN 1330.0231
THR 1340.0159
ASN 1350.0442
SER 1360.0238
MET 1370.0083
VAL 1380.0152
THR 1390.0131
LEU 1400.0101
GLY 1410.0089
CYS 1420.0062
LEU 1430.0050
VAL 1440.0074
LYS 1450.0126
GLY 1460.0087
TYR 1470.0078
PHE 1480.0003
PRO 1490.0028
GLU 1500.0058
PRO 1510.0036
VAL 1520.0037
THR 1530.0020
VAL 1540.0065
THR 1560.0101
TRP 1570.0098
ASN 1620.0234
SER 1630.0195
GLY 1640.0122
SER 1650.0153
LEU 1660.0105
SER 1670.0122
SER 1680.0343
GLY 1690.0217
VAL 1710.0114
HIS 1720.0079
THR 1730.0085
PHE 1740.0150
PRO 1750.0172
ALA 1760.0209
VAL 1770.0332
LEU 1780.0215
GLN 1790.0115
SER 1800.0093
ASP 1830.0175
LEU 1840.0057
TYR 1850.0120
THR 1860.0160
LEU 1870.0137
SER 1880.0114
SER 1890.0107
SER 1900.0113
VAL 1910.0135
THR 1920.0218
VAL 1930.0204
PRO 1940.0164
SER 1950.0160
SER 1960.0074
PRO 1980.0069
ARG 1990.0046
PRO 2000.0024
SER 2020.0111
GLU 2030.0161
THR 2040.0171
VAL 2050.0113
THR 2060.0179
CYS 2080.0148
ASN 2090.0122
VAL 2100.0105
ALA 2110.0086
HIS 2120.0085
PRO 2130.0087
ALA 2140.0096
SER 2150.0154
SER 2160.0160
THR 2170.0159
LYS 2180.0163
VAL 2190.0207
ASP 2200.0217
LYS 2210.0172
LYS 2220.0142
ILE 2230.0062
VAL 2260.0086
PRO 2270.0111
ARG 2280.0088
ASP 2320.0143
CYS 2330.0045
SER 20.0084
VAL 30.0098
LEU 40.0076
SER 50.0143
GLN 60.0130
SER 70.0218
PRO 80.0277
ALA 90.0247
ILE 100.0256
LEU 110.0198
SER 120.0111
ALA 130.0114
SER 140.0155
PRO 150.0149
GLY 160.0069
GLU 170.0050
LYS 180.0099
VAL 190.0163
THR 200.0180
MET 210.0160
THR 220.0149
CYS 230.0118
ARG 240.0144
ALA 250.0156
ARG 260.0089
SER 270.0202
SER 290.0114
VAL 300.0145
SER 310.0231
TYR 320.0155
MET 330.0128
HIS 340.0109
TRP 350.0064
TYR 360.0044
GLN 370.0064
GLN 380.0072
LYS 390.0117
SER 400.0195
GLY 410.0203
SER 420.0161
SER 430.0107
PRO 440.0060
LYS 450.0088
PRO 460.0089
TRP 470.0139
ILE 480.0150
HIS 490.0129
ALA 500.0166
THR 510.0199
SER 520.0253
ASN 530.0228
LEU 540.0231
ALA 550.0204
SER 560.0245
GLY 570.0229
VAL 580.0244
PRO 590.0074
ALA 600.0043
ARG 610.0039
PHE 620.0075
SER 630.0089
GLY 640.0106
SER 650.0222
GLY 660.0262
SER 670.0274
GLY 680.0117
THR 690.0109
SER 700.0186
TYR 710.0128
SER 720.0142
LEU 730.0144
THR 740.0118
ILE 750.0090
SER 760.0081
ARG 770.0066
VAL 780.0105
GLU 790.0137
ALA 800.0141
GLU 810.0166
ASP 820.0142
ALA 830.0115
ALA 840.0112
THR 850.0116
TYR 860.0041
TYR 870.0050
CYS 880.0054
GLN 890.0060
GLN 900.0065
TRP 910.0051
SER 920.0079
SER 930.0070
HIS 940.0048
PRO 950.0044
PRO 960.0047
THR 970.0056
PHE 980.0066
GLY 990.0095
SER 1000.0104
GLY 1010.0171
THR 1020.0182
LYS 1030.0186
LEU 1040.0207
GLU 1050.0170
ILE 1060.0174
LYS 1070.0197
ARG 1080.0214
ALA 1090.0213
ASP 1100.0114
ALA 1110.0101
ALA 1120.0161
PRO 1130.0143
THR 1140.0154
VAL 1150.0158
SER 1160.0079
ILE 1170.0069
PHE 1180.0086
PRO 1190.0112
PRO 1200.0113
SER 1210.0096
SER 1220.0148
GLU 1230.0153
GLN 1240.0141
LEU 1250.0125
THR 1260.0172
SER 1270.0199
GLY 1280.0139
GLY 1290.0104
ALA 1300.0082
SER 1310.0071
VAL 1320.0060
VAL 1330.0064
CYS 1340.0068
PHE 1350.0059
LEU 1360.0049
ASN 1370.0011
ASN 1380.0027
PHE 1390.0050
TYR 1400.0062
PRO 1410.0090
LYS 1420.0078
ASP 1430.0090
ILE 1440.0148
ASN 1450.0210
VAL 1460.0137
LYS 1470.0089
TRP 1480.0054
LYS 1490.0049
ILE 1500.0039
ASP 1510.0022
GLY 1520.0092
SER 1530.0172
GLU 1540.0177
ARG 1550.0139
GLN 1560.0134
ASN 1570.0160
GLY 1580.0126
VAL 1590.0127
LEU 1600.0192
ASN 1610.0241
SER 1620.0214
TRP 1630.0153
THR 1640.0167
ASP 1650.0202
GLN 1660.0204
ASP 1670.0356
SER 1680.0259
LYS 1690.0335
ASP 1700.0221
SER 1710.0203
THR 1720.0201
TYR 1730.0143
SER 1740.0089
MET 1750.0068
SER 1760.0134
SER 1770.0114
THR 1780.0119
LEU 1790.0082
THR 1800.0063
LEU 1810.0092
THR 1820.0073
LYS 1830.0084
ASP 1840.0087
GLU 1850.0058
TYR 1860.0064
GLU 1870.0081
ARG 1880.0086
HIS 1890.0053
ASN 1900.0064
SER 1910.0058
TYR 1920.0062
THR 1930.0063
CYS 1940.0060
GLU 1950.0136
ALA 1960.0216
THR 1970.0214
HIS 1980.0175
LYS 1990.0136
THR 2000.0348
SER 2010.0303
THR 2020.0403
SER 2030.0545
PRO 2040.0386
ILE 2050.0420
VAL 2060.0256
LYS 2070.0127
SER 2080.0062
PHE 2090.0073
ASN 2100.0039
ARG 2110.0089
ASN 2120.0165
GLU 2130.0079
CYS 2140.0120

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.