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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

<R2> analysis for 2608162333311823063

---  normal mode 98  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0950
ILE 4210.0436
PHE 4220.0277
ILE 4230.0576
SER 4240.0412
ASN 4250.0315
ASP 4260.0361
LYS 4270.0327
GLU 4280.0336
SER 4290.0348
ILE 4300.0252
LYS 4310.0207
CYS 4320.0127
PRO 4330.0109
CYS 4340.0085
GLU 4350.0127
PRO 4360.0309
GLU 4370.0350
ARG 4380.0252
ILE 4390.0260
SER 4400.0219
GLU 4410.0731
SER 4420.0330
THR 4430.0544
CYS 4440.0275
ASN 4450.0132
PHE 4460.0174
TYR 4470.0278
VAL 4480.0311
CYS 4490.0198
ASN 4500.0180
CYS 4510.0156
VAL 4520.0390
GLU 4530.0456
LYS 4540.0950
GLU 10.0267
VAL 20.0200
GLN 30.0112
LEU 40.0102
VAL 50.0114
GLU 60.0111
SER 70.0086
GLY 80.0094
GLY 90.0088
GLY 100.0072
LEU 110.0072
VAL 120.0070
LYS 130.0087
PRO 140.0106
GLY 150.0074
GLY 160.0110
SER 170.0111
LEU 180.0124
LYS 190.0107
LEU 200.0087
SER 210.0060
CYS 220.0132
ALA 230.0142
ALA 240.0126
SER 250.0220
GLY 260.0225
PHE 270.0244
ILE 280.0085
PHE 290.0056
SER 300.0076
ASP 310.0060
TYR 320.0068
TYR 330.0106
MET 340.0033
TYR 350.0030
TRP 360.0020
VAL 370.0033
ARG 380.0053
GLN 390.0068
THR 400.0147
PRO 410.0285
GLU 420.0282
LYS 430.0213
ARG 440.0106
LEU 450.0046
GLU 460.0030
TRP 470.0043
VAL 480.0077
ALA 490.0088
THR 500.0075
ILE 510.0099
SER 520.0152
ASP 520.0233
GLY 530.0475
ASN 540.0544
SER 550.0350
TYR 560.0167
THR 570.0140
TYR 580.0127
TYR 590.0134
VAL 600.0161
ASP 610.0158
SER 620.0136
VAL 630.0105
LYS 640.0105
GLY 650.0091
ARG 660.0077
PHE 670.0069
THR 680.0069
ILE 690.0066
SER 700.0076
ARG 710.0044
ASP 720.0036
ASN 730.0115
ALA 740.0207
LYS 750.0201
ASN 760.0102
ASN 770.0085
LEU 780.0062
TYR 790.0041
LEU 800.0050
GLN 810.0087
MET 820.0076
SER 820.0068
SER 820.0070
LEU 820.0069
LYS 830.0078
SER 840.0083
GLU 850.0034
ASP 860.0064
THR 870.0077
ALA 880.0057
ILE 890.0052
TYR 900.0041
TYR 910.0056
CYS 920.0055
ALA 930.0033
ARG 940.0035
ASP 950.0022
GLY 960.0035
PRO 970.0097
THR 980.0155
ASP 990.0148
SER 1000.0045
SER 1000.0038
GLY 1000.0038
TYR 1000.0040
GLY 1000.0047
GLY 1000.0038
PHE 1000.0041
GLY 1010.0043
TYR 1020.0055
TRP 1030.0042
GLY 1040.0067
GLN 1050.0075
GLY 1060.0046
THR 1070.0043
LEU 1080.0039
VAL 1090.0059
THR 1100.0063
VAL 1110.0068
SER 1120.0137
GLU 1130.0121
ALA 1140.0093
LYS 1150.0208
THR 1160.0115
THR 1170.0134
PRO 1180.0089
PRO 1190.0095
SER 1200.0103
VAL 1210.0089
TYR 1220.0079
PRO 1230.0077
LEU 1240.0048
ALA 1250.0041
PRO 1260.0063
GLY 1270.0079
SER 1280.0120
ALA 1290.0259
ALA 1300.0173
GLN 1330.0212
THR 1340.0069
ASN 1350.0355
SER 1360.0199
MET 1370.0064
VAL 1380.0088
THR 1390.0086
LEU 1400.0075
GLY 1410.0072
CYS 1420.0034
LEU 1430.0020
VAL 1440.0044
LYS 1450.0098
GLY 1460.0081
TYR 1470.0080
PHE 1480.0045
PRO 1490.0041
GLU 1500.0039
PRO 1510.0053
VAL 1520.0023
THR 1530.0027
VAL 1540.0056
THR 1560.0078
TRP 1570.0083
ASN 1620.0176
SER 1630.0192
GLY 1640.0137
SER 1650.0125
LEU 1660.0133
SER 1670.0155
SER 1680.0256
GLY 1690.0166
VAL 1710.0099
HIS 1720.0064
THR 1730.0082
PHE 1740.0135
PRO 1750.0170
ALA 1760.0181
VAL 1770.0223
LEU 1780.0142
GLN 1790.0089
SER 1800.0106
ASP 1830.0064
LEU 1840.0030
TYR 1850.0084
THR 1860.0120
LEU 1870.0108
SER 1880.0086
SER 1890.0091
SER 1900.0094
VAL 1910.0113
THR 1920.0141
VAL 1930.0135
PRO 1940.0107
SER 1950.0121
SER 1960.0074
PRO 1980.0066
ARG 1990.0050
PRO 2000.0049
SER 2020.0121
GLU 2030.0145
THR 2040.0131
VAL 2050.0064
THR 2060.0102
CYS 2080.0078
ASN 2090.0054
VAL 2100.0050
ALA 2110.0053
HIS 2120.0047
PRO 2130.0061
ALA 2140.0115
SER 2150.0135
SER 2160.0108
THR 2170.0138
LYS 2180.0149
VAL 2190.0199
ASP 2200.0143
LYS 2210.0129
LYS 2220.0103
ILE 2230.0052
VAL 2260.0067
PRO 2270.0077
ARG 2280.0064
ASP 2320.0146
CYS 2330.0123
SER 20.0076
VAL 30.0082
LEU 40.0080
SER 50.0057
GLN 60.0049
SER 70.0093
PRO 80.0149
ALA 90.0134
ILE 100.0147
LEU 110.0125
SER 120.0090
ALA 130.0074
SER 140.0064
PRO 150.0084
GLY 160.0116
GLU 170.0076
LYS 180.0074
VAL 190.0121
THR 200.0100
MET 210.0088
THR 220.0086
CYS 230.0092
ARG 240.0115
ALA 250.0141
ARG 260.0160
SER 270.0258
SER 290.0182
VAL 300.0135
SER 310.0165
TYR 320.0071
MET 330.0059
HIS 340.0062
TRP 350.0034
TYR 360.0029
GLN 370.0032
GLN 380.0059
LYS 390.0058
SER 400.0050
GLY 410.0265
SER 420.0153
SER 430.0014
PRO 440.0032
LYS 450.0037
PRO 460.0059
TRP 470.0080
ILE 480.0096
HIS 490.0107
ALA 500.0146
THR 510.0153
SER 520.0187
ASN 530.0199
LEU 540.0163
ALA 550.0199
SER 560.0353
GLY 570.0327
VAL 580.0162
PRO 590.0136
ALA 600.0147
ARG 610.0115
PHE 620.0003
SER 630.0052
GLY 640.0122
SER 650.0230
GLY 660.0208
SER 670.0229
GLY 680.0152
THR 690.0178
SER 700.0205
TYR 710.0103
SER 720.0087
LEU 730.0083
THR 740.0055
ILE 750.0065
SER 760.0080
ARG 770.0023
VAL 780.0055
GLU 790.0132
ALA 800.0136
GLU 810.0184
ASP 820.0179
ALA 830.0105
ALA 840.0085
THR 850.0081
TYR 860.0041
TYR 870.0046
CYS 880.0044
GLN 890.0043
GLN 900.0071
TRP 910.0084
SER 920.0197
SER 930.0201
HIS 940.0169
PRO 950.0117
PRO 960.0076
THR 970.0058
PHE 980.0050
GLY 990.0062
SER 1000.0060
GLY 1010.0026
THR 1020.0049
LYS 1030.0059
LEU 1040.0095
GLU 1050.0059
ILE 1060.0059
LYS 1070.0024
ARG 1080.0014
ALA 1090.0024
ASP 1100.0055
ALA 1110.0047
ALA 1120.0056
PRO 1130.0024
THR 1140.0035
VAL 1150.0038
SER 1160.0039
ILE 1170.0037
PHE 1180.0049
PRO 1190.0046
PRO 1200.0048
SER 1210.0039
SER 1220.0039
GLU 1230.0060
GLN 1240.0064
LEU 1250.0060
THR 1260.0116
SER 1270.0134
GLY 1280.0029
GLY 1290.0039
ALA 1300.0037
SER 1310.0027
VAL 1320.0023
VAL 1330.0029
CYS 1340.0035
PHE 1350.0023
LEU 1360.0026
ASN 1370.0037
ASN 1380.0050
PHE 1390.0061
TYR 1400.0022
PRO 1410.0037
LYS 1420.0069
ASP 1430.0083
ILE 1440.0040
ASN 1450.0064
VAL 1460.0068
LYS 1470.0053
TRP 1480.0032
LYS 1490.0034
ILE 1500.0028
ASP 1510.0054
GLY 1520.0197
SER 1530.0104
GLU 1540.0119
ARG 1550.0118
GLN 1560.0053
ASN 1570.0062
GLY 1580.0032
VAL 1590.0054
LEU 1600.0123
ASN 1610.0147
SER 1620.0146
TRP 1630.0101
THR 1640.0049
ASP 1650.0050
GLN 1660.0044
ASP 1670.0097
SER 1680.0176
LYS 1690.0310
ASP 1700.0133
SER 1710.0062
THR 1720.0088
TYR 1730.0064
SER 1740.0046
MET 1750.0042
SER 1760.0079
SER 1770.0063
THR 1780.0066
LEU 1790.0037
THR 1800.0034
LEU 1810.0046
THR 1820.0102
LYS 1830.0051
ASP 1840.0114
GLU 1850.0036
TYR 1860.0036
GLU 1870.0047
ARG 1880.0055
HIS 1890.0059
ASN 1900.0064
SER 1910.0057
TYR 1920.0056
THR 1930.0055
CYS 1940.0042
GLU 1950.0051
ALA 1960.0060
THR 1970.0042
HIS 1980.0052
LYS 1990.0107
THR 2000.0086
SER 2010.0046
THR 2020.0191
SER 2030.0229
PRO 2040.0135
ILE 2050.0141
VAL 2060.0085
LYS 2070.0046
SER 2080.0035
PHE 2090.0028
ASN 2100.0040
ARG 2110.0078
ASN 2120.0195
GLU 2130.0100
CYS 2140.0035

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.